You are here

Home

CAN33_12140-T1, CAN33_12140-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_12140-T1
Unique NameCAN33_12140-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000009.1:1070757..1073622-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_12140-T1 ID=CAN33_12140-T1|Name=CAN33_12140-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2866bp|location=Sequence derived from alignment at NKJJ01000009.1:1070757..1073622- (Aspergillus niger FDAARGOS_311)
ATGTCTCAACCATATCTGCATCCGGTGTCCCAGTCTGTCGCGTTGTTTGA
GCAATTCATTGCAACGGAGCCACAGGCCCTAGTCTTGAAGGAGAAGGTGC
TCTCTCTTTCTGGAGATAGCTTCGATATCAGGCTTGGGGATGGAGTGCCA
ATTCTGAAAGTGACTGGTACTTTGTTGTCAGTTTCCGGACGTAAGAAAGT
CGAAGACATGGATCGCAACCATCTATTTGATATTCGCAAGGAGCATATGC
ACGTTCACACAACCTATGTGTTGGAGGATCCCGATGGTAACAAGATATGC
GAGGTCAGGAGCAGTCACAAATGTAAGCACCATCAGGTACACTCCTACTG
TATAACTAACCGCTATAGTTATCGGGTCGAAAGCCACTGCCACCTGTACT
GACCGATACGGCAAGCAAGTGGTCTTGGTAATGACAGGAAATTGGAACGA
TCGTGCTGCCCATATTGTTAATGAAAGTACTGGAGAAGCAGTCGCTCGCA
TTTCCAAGAAGCGTTTTACCGCCAGTCATATTTTCTTTGGCCAGGACACG
TATAATGTGATTGTGGCGCCTGGTGTAGATATGGCATTGGTCGCTGGTTT
ATGTATCTGCTTCGATGAGAAGAACAATGATTAGTGAGGGAAAGGCGAAC
AAAATTGTATATAGACTGTGAAGTAATTATGCGATGGAGTGGTAGAACAG
GAGTAATTAAAATTCTACTGCAAGCCACTTGGCAAACCCAATGAGAACAT
AAGAGCCGTCTAATGTATCTAGGATGTAAGATGGCCTACATTGTAACCTA
AGATATAATTTCAGGCATAGTATAATGTTTGGTTTCTAGTACTAAGACTG
CTGAGTATTGCTCCATTAATCTTGTGGTAGATCTTCGTATGAAGCGCGCT
TAACGAAGCCTATGACTGCTGGTTGTGAGGCGTAGACAACATTACGGCCT
CCTCAAGCAAAGCAACCAATCCTGCTCTGTTATATTTGGATGGCAGTTGA
AAAGTTTTGGGAGCACTGAACTTAATCATATTAGGCTTGTTGATTGACCA
GAATTAACCTTCCGAGGATTTTCAACAGGCTGCTTGTCACAAGTCGAAGT
AATGGGCTACTACGAAGCTTGACAGCGCTAACCAGACTGGCCCCTTGGAC
CCTCATTCCTAATCAAACCTTAAAACTTGCAGGTCGGGCCCGCGCTTTCA
TGTCGATCGGTCATCCGCTAAGCGCACGTTGATTCCCGATTGGGAATAGC
TTGCAGGTGATGGGGAATAGAAAACCTTGCATCCCCAACAACCCCACCAG
GTCTTTCTGGCTCGTTAAAAAGCGATCAGCCTTACAGGTAGTTTTCGACA
CTTCAGAGTGTAGGTATGTAAGCTGAGCTGCTAATATTGCAACTTTGTGG
GGGATTATGCGCAAGTTGTACCCCAATCAAGTATGGTTTATCCGAGCCGA
ATGCCTTTGGAAACCTAGTGATCCGAGGCTGAGCAGTTCAGCTGGAATGG
GTTACACATCCAAGGTCGTCCGGCAAGGCTGACAGGTGAACAGTGTCTTA
AAATGATTAAACATCAAGATAGACATGTATGCTAGCTGTAGGTACAACAT
TGGCCGCATATAAGACTAAGTCAGTACGCCCCTCTTTGATTCTCCAGTCC
CTCCCTCCTTTCTTCCAACGTTCAATCTTTATAACGTGATCTCAAGCCAA
AGTGAATAGTATACCATGGTTGGACAAGGAAGCTATCAGCTGGCGAGGAG
CGATGGCCCCCCTCCTTTACCTCTTGATCTTCGCGAACACAAATTACATA
TATCTTTGCAATGGGGGATTATTTTACTCACGTCCTGTATAGCACCATTG
GTGCTCTATCCAAGTTTACACTGGGGGGCGGATCTATCCCTAAAGATTTG
TCTGTGTCCCATCTATGTCTTCAAGCTGGTCTTGCCCATATCTTATGATT
GGTACTAATGCATCGCGATATCAGCTCTTAGCGTATCCAGTGCAATCCTA
GGGGCATCGACCTTATACTCGTTGGGCATACGAACATGGCGACTATTCAA
ATCGACATCGAATTGCCGACCCCCTACATCTGAAAGTCGATGGAATGTAT
GCTATATATTTCCAGCCTACTTCTGAAATATGACAAACTAGGCTCTACTA
ACACACTCTTCTTCCCTTCCATCATAAAGTTTGACTTCTTCCACTGGAAC
TATCTTCTGGGGTTTGTGCTCGTCACAATCATTATTGTGGTTGGCTTGAC
GGAAGATCCTCCTAGTGTACGAATGACATCTTTGCCACCGTCTATTCTGC
TCGTGCAAGTTGGCCTCACACTCGTCATTGTCGGAGTTCTGGCAAAGCTT
CGCGTACGGCAACCATTTCCAGTGTCTTCTATGCCCGCAGGTACAGCATT
TCGTCCAGGTATCTTAGTGATCATCGAAGATGTCGTTGCGGTGGACGGGG
GCCGAGGCAGGGCATACCGTTCAGCCCTAATGGAAAGGTATGCAGCCAGC
TTACGGTTCCGACGACTAATTGAGAATCTCAATTGGTTCTGGGGATTTGG
TGGGCTCCTGATGGGAATTGTTTTGATATGTATACTTGCATCGGTTGGCA
GTCAGACCTTTGCGTTTGGGTTGGGTAAGTTCATGATTGGTCTTTTTCCT
GTCGTTATGTACCCCACTTTAAGGCCCATATCCTGAGATTTCTCTTATAC
CGAGAGTGAAGGCTAACATAATTCTTATTGTTTTTTTCGGATAGGGTGGA
TTGTCCCATGGATTTGGGCAGGTGTCTGGGCAGTCATCACGACTTACTGG
GTGAAATCTGCGCTGAGGGAAGAGAAGCTTACCTGGTCGGAGAGCCAGAA
AGTAGTGGAGGTGTAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000009.1:1070757..1073622-

>CAN33_12140-T1 ID=CAN33_12140-T1|Name=CAN33_12140-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4380bp|location=Sequence derived from alignment at NKJJ01000009.1:1070757..1073622- (Aspergillus niger FDAARGOS_311)
GGTGGATTGTCCCATGGATTTGGGCAGGTGTCTGGGCAGTCATCACGACT
TACTGGGTGAAATCTGCGCTGAGGGAAGAGAAGCTTACCTGGTCGGAGAG
CCAGAAAGTAGTGGAGGTGTAGTTTGACTTCTTCCACTGGAACTATCTTC
TGGGGTTTGTGCTCGTCACAATCATTATTGTGGTTGGCTTGACGGAAGAT
CCTCCTAGTGTACGAATGACATCTTTGCCACCGTCTATTCTGCTCGTGCA
AGTTGGCCTCACACTCGTCATTGTCGGAGTTCTGGCAAAGCTTCGCGTAC
GGCAACCATTTCCAGTGTCTTCTATGCCCGCAGGTACAGCATTTCGTCCA
GGTATCTTAGTGATCATCGAAGATGTCGTTGCGGTGGACGGGGGCCGAGG
CAGGGCATACCGTTCAGCCCTAATGGAAAGGTATGCAGCCAGCTTACGGT
TCCGACGACTAATTGAGAATCTCAATTGGTTCTGGGGATTTGGTGGGCTC
CTGATGGGAATTGTTTTGATATGTATACTTGCATCGGTTGGCAGTCAGAC
CTTTGCGTTTGGGTTGGTTATCGGGTCGAAAGCCACTGCCACCTGTACTG
ACCGATACGGCAAGCAAGTGGTCTTGGTAATGACAGGAAATTGGAACGAT
CGTGCTGCCCATATTGTTAATGAAAGTACTGGAGAAGCAGTCGCTCGCAT
TTCCAAGAAGCGTTTTACCGCCAGTCATATTTTCTTTGGCCAGGACACGT
ATAATGTGATTGTGGCGCCTGGTATGTCTCAACCATATCTGCATCCGGTG
TCCCAGTCTGTCGCGTTGTTTGAGCAATTCATTGCAACGGAGCCACAGGC
CCTAGTCTTGAAGGAGAAGGTGCTCTCTCTTTCTGGAGATAGCTTCGATA
TCAGGCTTGGGGATGGAGTGCCAATTCTGAAAGTGACTGGTACTTTGTTG
TCAGTTTCCGGACGTAAGAAAGTCGAAGACATGGATCGCAACCATCTATT
TGATATTCGCAAGGAGCATATGCACGTTCACACAACCTATGTGTTGGAGG
ATCCCGATGGTAACAAGATATGCGAGGTCAGGAGCAGTCACAAATGGTGG
ATTGTCCCATGGATTTGGGCAGGTGTCTGGGCAGTCATCACGACTTACTG
GGTGAAATCTGCGCTGAGGGAAGAGAAGCTTACCTGGTCGGAGAGCCAGA
AAGTAGTGGAGGTGTAGTTTGACTTCTTCCACTGGAACTATCTTCTGGGG
TTTGTGCTCGTCACAATCATTATTGTGGTTGGCTTGACGGAAGATCCTCC
TAGTGTACGAATGACATCTTTGCCACCGTCTATTCTGCTCGTGCAAGTTG
GCCTCACACTCGTCATTGTCGGAGTTCTGGCAAAGCTTCGCGTACGGCAA
CCATTTCCAGTGTCTTCTATGCCCGCAGGTACAGCATTTCGTCCAGGTAT
CTTAGTGATCATCGAAGATGTCGTTGCGGTGGACGGGGGCCGAGGCAGGG
CATACCGTTCAGCCCTAATGGAAAGGTATGCAGCCAGCTTACGGTTCCGA
CGACTAATTGAGAATCTCAATTGGTTCTGGGGATTTGGTGGGCTCCTGAT
GGGAATTGTTTTGATATGTATACTTGCATCGGTTGGCAGTCAGACCTTTG
CGTTTGGGTTGGTTATCGGGTCGAAAGCCACTGCCACCTGTACTGACCGA
TACGGCAAGCAAGTGGTCTTGGTAATGACAGGAAATTGGAACGATCGTGC
TGCCCATATTGTTAATGAAAGTACTGGAGAAGCAGTCGCTCGCATTTCCA
AGAAGCGTTTTACCGCCAGTCATATTTTCTTTGGCCAGGACACGTATAAT
GTGATTGTGGCGCCTGGTATGTCTCAACCATATCTGCATCCGGTGTCCCA
GTCTGTCGCGTTGTTTGAGCAATTCATTGCAACGGAGCCACAGGCCCTAG
TCTTGAAGGAGAAGGTGCTCTCTCTTTCTGGAGATAGCTTCGATATCAGG
CTTGGGGATGGAGTGCCAATTCTGAAAGTGACTGGTACTTTGTTGTCAGT
TTCCGGACGTAAGAAAGTCGAAGACATGGATCGCAACCATCTATTTGATA
TTCGCAAGGAGCATATGCACGTTCACACAACCTATGTGTTGGAGGATCCC
GATGGTAACAAGATATGCGAGGTCAGGAGCAGTCACAAATGGTGGATTGT
CCCATGGATTTGGGCAGGTGTCTGGGCAGTCATCACGACTTACTGGGTGA
AATCTGCGCTGAGGGAAGAGAAGCTTACCTGGTCGGAGAGCCAGAAAGTA
GTGGAGGTGTAGTTTGACTTCTTCCACTGGAACTATCTTCTGGGGTTTGT
GCTCGTCACAATCATTATTGTGGTTGGCTTGACGGAAGATCCTCCTAGTG
TACGAATGACATCTTTGCCACCGTCTATTCTGCTCGTGCAAGTTGGCCTC
ACACTCGTCATTGTCGGAGTTCTGGCAAAGCTTCGCGTACGGCAACCATT
TCCAGTGTCTTCTATGCCCGCAGGTACAGCATTTCGTCCAGGTATCTTAG
TGATCATCGAAGATGTCGTTGCGGTGGACGGGGGCCGAGGCAGGGCATAC
CGTTCAGCCCTAATGGAAAGGTATGCAGCCAGCTTACGGTTCCGACGACT
AATTGAGAATCTCAATTGGTTCTGGGGATTTGGTGGGCTCCTGATGGGAA
TTGTTTTGATATGTATACTTGCATCGGTTGGCAGTCAGACCTTTGCGTTT
GGGTTGGTTATCGGGTCGAAAGCCACTGCCACCTGTACTGACCGATACGG
CAAGCAAGTGGTCTTGGTAATGACAGGAAATTGGAACGATCGTGCTGCCC
ATATTGTTAATGAAAGTACTGGAGAAGCAGTCGCTCGCATTTCCAAGAAG
CGTTTTACCGCCAGTCATATTTTCTTTGGCCAGGACACGTATAATGTGAT
TGTGGCGCCTGGTATGTCTCAACCATATCTGCATCCGGTGTCCCAGTCTG
TCGCGTTGTTTGAGCAATTCATTGCAACGGAGCCACAGGCCCTAGTCTTG
AAGGAGAAGGTGCTCTCTCTTTCTGGAGATAGCTTCGATATCAGGCTTGG
GGATGGAGTGCCAATTCTGAAAGTGACTGGTACTTTGTTGTCAGTTTCCG
GACGTAAGAAAGTCGAAGACATGGATCGCAACCATCTATTTGATATTCGC
AAGGAGCATATGCACGTTCACACAACCTATGTGTTGGAGGATCCCGATGG
TAACAAGATATGCGAGGTCAGGAGCAGTCACAAATGGTGGATTGTCCCAT
GGATTTGGGCAGGTGTCTGGGCAGTCATCACGACTTACTGGGTGAAATCT
GCGCTGAGGGAAGAGAAGCTTACCTGGTCGGAGAGCCAGAAAGTAGTGGA
GGTGTAGTTTGACTTCTTCCACTGGAACTATCTTCTGGGGTTTGTGCTCG
TCACAATCATTATTGTGGTTGGCTTGACGGAAGATCCTCCTAGTGTACGA
ATGACATCTTTGCCACCGTCTATTCTGCTCGTGCAAGTTGGCCTCACACT
CGTCATTGTCGGAGTTCTGGCAAAGCTTCGCGTACGGCAACCATTTCCAG
TGTCTTCTATGCCCGCAGGTACAGCATTTCGTCCAGGTATCTTAGTGATC
ATCGAAGATGTCGTTGCGGTGGACGGGGGCCGAGGCAGGGCATACCGTTC
AGCCCTAATGGAAAGGTATGCAGCCAGCTTACGGTTCCGACGACTAATTG
AGAATCTCAATTGGTTCTGGGGATTTGGTGGGCTCCTGATGGGAATTGTT
TTGATATGTATACTTGCATCGGTTGGCAGTCAGACCTTTGCGTTTGGGTT
GGTTATCGGGTCGAAAGCCACTGCCACCTGTACTGACCGATACGGCAAGC
AAGTGGTCTTGGTAATGACAGGAAATTGGAACGATCGTGCTGCCCATATT
GTTAATGAAAGTACTGGAGAAGCAGTCGCTCGCATTTCCAAGAAGCGTTT
TACCGCCAGTCATATTTTCTTTGGCCAGGACACGTATAATGTGATTGTGG
CGCCTGGTATGTCTCAACCATATCTGCATCCGGTGTCCCAGTCTGTCGCG
TTGTTTGAGCAATTCATTGCAACGGAGCCACAGGCCCTAGTCTTGAAGGA
GAAGGTGCTCTCTCTTTCTGGAGATAGCTTCGATATCAGGCTTGGGGATG
GAGTGCCAATTCTGAAAGTGACTGGTACTTTGTTGTCAGTTTCCGGACGT
AAGAAAGTCGAAGACATGGATCGCAACCATCTATTTGATATTCGCAAGGA
GCATATGCACGTTCACACAACCTATGTGTTGGAGGATCCCGATGGTAACA
AGATATGCGAGGTCAGGAGCAGTCACAAAT
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_12140CAN33_12140Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_12140-T1CAN33_12140-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_12140-T1.cdsCAN33_12140-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_12140-T1.exon4CAN33_12140-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_12140-T1.exon3CAN33_12140-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_12140-T1.exon2CAN33_12140-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_12140-T1.exon1CAN33_12140-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR025659
DBxrefInterPro:IPR038595
DBxrefInterPro:IPR007612
DBxrefPFAM:PF04525
ProductTubby C 2 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000009.1supercontigNKJJ01000009.1:1070757..1073622 -
Powered by Drupal