You are here

CAN33_12215-T1, CAN33_12215-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_12215-T1
Unique NameCAN33_12215-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000009.1:1123888..1124648-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_12215-T1 ID=CAN33_12215-T1|Name=CAN33_12215-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=761bp|location=Sequence derived from alignment at NKJJ01000009.1:1123888..1124648- (Aspergillus niger FDAARGOS_311)
ATGAGTGAATACTTTGACACGAGCTACGCGATGTAAGTAGGTCCAGCCTG GGTCTCATACAGCAATAGCCACTAATTCAATATTACAGTTTTGAAATCAT AGGGTCGACATTTGTGAAGGCCAAACAGCCTTATCAGCCGCTGTTCTCGA TGTCCCCTACTATCGACATCTTGAAGCGTTCTGAGTCCCAGACATGGATT GGGTGCCCCGCAGCACTTCTCTACGTGCTTTCTCTCGTGAATGCGGCTGC TTCGAGCTCTCACAAAATGCTACCAGGTTCGATTTACAATATTTATTCTC ATCTGCGGAACTTCTCTCCAATGAAATGGGCAGTTGCGGGTGCGGAAATT CATTACATAAAACCAAGATATCAATTTGCCTGTGTCTGGCAAGCAGCGAT CGAGATATACGCACTACAGGTTCTCCCAGTTCTTTTCGAAATCGATCTTT CCAACGAAAGGAGAATCAGCATTTCACTCAATTCGATCCTTCACCATCTC AAATCTATAAACCCCACGGATGTCCATCTCAAAGGCATCCTATGGCCTGC ATTCGTCATTGGCGCCGAAGTACAAACTATGTCTCAAATGGTACTCATTA CTGATGTGTTTGGGCATCTGTGGACAGTATGGCACTGTTACAATGTGACG AATGCCTTGAAGGTGCTTGAGAAGATTTGGGCTCGTCGAGCTATTGAAGG GTCGTCTAGACGATGGATTGAGTATGTCTATGAGTGGGGTGAAGATTGGA TGTTCATATAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000009.1:1123888..1124648-

>CAN33_12215-T1 ID=CAN33_12215-T1|Name=CAN33_12215-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1410bp|location=Sequence derived from alignment at NKJJ01000009.1:1123888..1124648- (Aspergillus niger FDAARGOS_311)
TTTTGAAATCATAGGGTCGACATTTGTGAAGGCCAAACAGCCTTATCAGC
CGCTGTTCTCGATGTCCCCTACTATCGACATCTTGAAGCGTTCTGAGTCC
CAGACATGGATTGGGTGCCCCGCAGCACTTCTCTACGTGCTTTCTCTCGT
GAATGCGGCTGCTTCGAGCTCTCACAAAATGCTACCAGGTTCGATTTACA
ATATTTATTCTCATCTGCGGAACTTCTCTCCAATGAAATGGGCAGTTGCG
GGTGCGGAAATTCATTACATAAAACCAAGATATCAATTTGCCTGTGTCTG
GCAAGCAGCGATCGAGATATACGCACTACAGGTTCTCCCAGTTCTTTTCG
AAATCGATCTTTCCAACGAAAGGAGAATCAGCATTTCACTCAATTCGATC
CTTCACCATCTCAAATCTATAAACCCCACGGATGTCCATCTCAAAGGCAT
CCTATGGCCTGCATTCGTCATTGGCGCCGAAGTACAAACTATGTCTCAAA
TGGTACTCATTACTGATGTGTTTGGGCATCTGTGGACAGTATGGCACTGT
TACAATGTGACGAATGCCTTGAAGGTGCTTGAGAAGATTTGGGCTCGTCG
AGCTATTGAAGGGTCGTCTAGACGATGGATTGAGTATGTCTATGAGTGGG
GTGAAGATTGGATGTTCATATAGATGAGTGAATACTTTGACACGAGCTAC
GCGATTTTTGAAATCATAGGGTCGACATTTGTGAAGGCCAAACAGCCTTA
TCAGCCGCTGTTCTCGATGTCCCCTACTATCGACATCTTGAAGCGTTCTG
AGTCCCAGACATGGATTGGGTGCCCCGCAGCACTTCTCTACGTGCTTTCT
CTCGTGAATGCGGCTGCTTCGAGCTCTCACAAAATGCTACCAGGTTCGAT
TTACAATATTTATTCTCATCTGCGGAACTTCTCTCCAATGAAATGGGCAG
TTGCGGGTGCGGAAATTCATTACATAAAACCAAGATATCAATTTGCCTGT
GTCTGGCAAGCAGCGATCGAGATATACGCACTACAGGTTCTCCCAGTTCT
TTTCGAAATCGATCTTTCCAACGAAAGGAGAATCAGCATTTCACTCAATT
CGATCCTTCACCATCTCAAATCTATAAACCCCACGGATGTCCATCTCAAA
GGCATCCTATGGCCTGCATTCGTCATTGGCGCCGAAGTACAAACTATGTC
TCAAATGGTACTCATTACTGATGTGTTTGGGCATCTGTGGACAGTATGGC
ACTGTTACAATGTGACGAATGCCTTGAAGGTGCTTGAGAAGATTTGGGCT
CGTCGAGCTATTGAAGGGTCGTCTAGACGATGGATTGAGTATGTCTATGA
GTGGGGTGAAGATTGGATGTTCATATAGATGAGTGAATACTTTGACACGA
GCTACGCGAT
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_12215CAN33_12215Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_12215-T1CAN33_12215-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_12215-T1.cdsCAN33_12215-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_12215-T1.exon2CAN33_12215-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_12215-T1.exon1CAN33_12215-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR021858
DBxrefPFAM:PF11951
ProductFungal specific transcription factor domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000009.1supercontigNKJJ01000009.1:1123888..1124648 -