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CAN33_12300-T1, CAN33_12300-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_12300-T1
Unique NameCAN33_12300-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000010.1:78189..80173+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_12300-T1 ID=CAN33_12300-T1|Name=CAN33_12300-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1985bp|location=Sequence derived from alignment at NKJJ01000010.1:78189..80173+ (Aspergillus niger FDAARGOS_311)
ATGGAAGTGCTGCGTCATCGGACAGCTACCTGCCTTCAACCTGATACCTG
GGAAGATACACTGGTGAACAATTTCGGCTCACGCATTCCTATCAGTGAAG
GCACGGTCTTTCTATCCGCTCGGAATATACTCTTTGGGTGTATCATAGCG
GCGAGGTCGTCGTCATCACCTAGCGTGTGGTGATCTCGGCGTTGACTCGA
TGTAGATCTCACTGTAAGTCTACTAGTAGTAGTACCCGACTATGACACGG
TCTGAGGGACAGTCCAGCAAGTCCATGTATCATTCTGTCACACTCCACAT
GGCCGATCGATCCAGACCTACCGGGTAGAATGGGAACTTGTACTGTAACA
GAGCCATGGTTGGGATGGAGTTGCCTACTCTTAACAATCATTATTAACCT
CCCAACGGTACCCTGCCTCATTCTTCTTCCTCTCCTCTTCGCATCTCCAA
AAAATATTATCCACTCCTCCAACCACTTCTCTACCGTCCCTCCCTCTCAC
TCCTCCTCTTCTTACCTTGCATCTCCTTCATCATCATTTCATTTCTTTCA
TCATATATCTACGACTCATCTTACTTTTCCATTTCTTTGTCCTCGCTTTT
GTGAGACCCCTCATTGTTATCGCCCCTCCCATTCTAATCAGTGACGTAGT
AGTCTCCTCATCCGCCTTCGGATTTCTTCCATCATGTGTGTTTCCCATCC
CTGGGAAGCGGCTTTCCTCATTGATTCATTCTAATGTCCCTTTTTTAGGA
GAGTAATCATTAGGGAGACTAGCCTTGAAGCTTCAGAATACATTGCAGAT
TACATCATTAGTATGTCTTCCCGGAAACTCGTCGTGCTTTCATCGTATTC
TTCATTCTGCCACACCTCTATGAATTTGTCTGCTGTATGCGTTCACTTAC
TGATTATGCGGTCTAGGTCGCATAAAGTCGTTCAAGCCCAGTGAAGACCG
GCCCTTTGTGCTGGGACTCCCGACTGGTAGCAGTCCTGAGATAATTTATA
AGACTCTGGTGCGCCGGCACAGGGACGGTGATATCTCGTTCAGAAATGTC
GTAACGTTCAATATGGTATGCATTAGTAGCCCCCTCCCCCCCTTCTTTCA
TGCAAGCACTGTTTTCTTTGCTAAACAAACTAGGACGAATACGTTGGACT
GCCTCGTGACCATCCGGAGTCCTACCACAGCTTCATGTACAAGCACTTCT
TCTCCCACGTGGATATTCCGCCCCAGAACATCAATATCCTTGATGGTAAC
GCACCCGATCTCGCAGCTGAGTGTTCGTCCTTTGAGGCGCGAATTGCTCG
CTATGGCGGTATTGAGCTCTTCCTGGGTGGCGTGGGTCCAGATGGGCATA
TCGCTTTCAATGAACCAGGCTCCTCCTTGAGTAGTCGTACTCGTGTCAAG
ACCCTGGCATATGACACAATCCTGGCTAACTCGCGGTTTTTTGGCAATGA
CTTGGACTTGGTGCCGCGGAGGTCACTGACCGTGGGTATTCAGACTATCA
TGGATGCTCGCGAAGTAGTCATCGTGGCCACCGGTGCTCACAAGGCTCTT
GCTGTGGAGAAAGGCCTGGAAGGCGGCATCAACCACATGTGGACACTCTC
AGCGCTGCAGCTACACCCATATGCGCTGATTGTCTGCGACCGAGATGCAA
CTCTGGAGCTGAAGGTCAAGACTGTTCGCTATTTCGAATCAATTGAACAA
TCCGGCACGGATGCACGTACTCAGGGTCCGCCTCTTGTCTACAGACCCAG
GACATATGTTCCTGCCCCAGTGGGTGTCGTGAAACTCCAGCCGCCGCACA
TTCCTCAGAAAGCACCCAAGGATCTCCGAATCAACACGGAACTTAACACA
TCGGTAGAAGACGAGGAACTCACACCAGACAGCATGTCTTCACGTATGGT
TGACTCGGCGATTGGAGGGCTGGATTCGACTCTGAAGGGGGACTTGTTCT
TTGATCACATGGGCTCACGGGTTGCATCGCATTGA
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Coding sequence (CDS) from alignment at NKJJ01000010.1:78189..80173+

>CAN33_12300-T1 ID=CAN33_12300-T1|Name=CAN33_12300-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3285bp|location=Sequence derived from alignment at NKJJ01000010.1:78189..80173+ (Aspergillus niger FDAARGOS_311)
ATGGAAGTGCTGCGTCATCGGACAGCTACCTGCCTTCAACCTGATACCTG
GGAAGATACACTGGTGAACAATTTCGGCTCACGCATTCCTATCAGTCGCA
TAAAGTCGTTCAAGCCCAGTGAAGACCGGCCCTTTGTGCTGGGACTCCCG
ACTGGTAGCAGTCCTGAGATAATTTATAAGACTCTGGTGCGCCGGCACAG
GGACGGTGATATCTCGTTCAGAAATGTCGTAACGTTCAATATGGACGAAT
ACGTTGGACTGCCTCGTGACCATCCGGAGTCCTACCACAGCTTCATGTAC
AAGCACTTCTTCTCCCACGTGGATATTCCGCCCCAGAACATCAATATCCT
TGATGGTAACGCACCCGATCTCGCAGCTGAGTGTTCGTCCTTTGAGGCGC
GAATTGCTCGCTATGGCGGTATTGAGCTCTTCCTGGGTGGCGTGGGTCCA
GATGGGCATATCGCTTTCAATGAACCAGGCTCCTCCTTGAGTAGTCGTAC
TCGTGTCAAGACCCTGGCATATGACACAATCCTGGCTAACTCGCGGTTTT
TTGGCAATGACTTGGACTTGGTGCCGCGGAGGTCACTGACCGTGGGTATT
CAGACTATCATGGATGCTCGCGAAGTAGTCATCGTGGCCACCGGTGCTCA
CAAGGCTCTTGCTGTGGAGAAAGGCCTGGAAGGCGGCATCAACCACATGT
GGACACTCTCAGCGCTGCAGCTACACCCATATGCGCTGATTGTCTGCGAC
CGAGATGCAACTCTGGAGCTGAAGGTCAAGACTGTTCGCTATTTCGAATC
AATTGAACAATCCGGCACGGATGCACGTACTCAGGGTCCGCCTCTTGTCT
ACAGACCCAGGACATATGTTCCTGCCCCAGTGGGTGTCGTGAAACTCCAG
CCGCCGCACATTCCTCAGAAAGCACCCAAGGATCTCCGAATCAACACGGA
ACTTAACACATCGGTAGAAGACGAGGAACTCACACCAGACAGCATGTCTT
CACGTATGGTTGACTCGGCGATTGGAGGGCTGGATTCGACTCTGAAGGGG
GACTTGTTCTTTGATCACATGGGCTCACGGGTTGCATCGCATTGAATGGA
AGTGCTGCGTCATCGGACAGCTACCTGCCTTCAACCTGATACCTGGGAAG
ATACACTGGTGAACAATTTCGGCTCACGCATTCCTATCAGTCGCATAAAG
TCGTTCAAGCCCAGTGAAGACCGGCCCTTTGTGCTGGGACTCCCGACTGG
TAGCAGTCCTGAGATAATTTATAAGACTCTGGTGCGCCGGCACAGGGACG
GTGATATCTCGTTCAGAAATGTCGTAACGTTCAATATGGACGAATACGTT
GGACTGCCTCGTGACCATCCGGAGTCCTACCACAGCTTCATGTACAAGCA
CTTCTTCTCCCACGTGGATATTCCGCCCCAGAACATCAATATCCTTGATG
GTAACGCACCCGATCTCGCAGCTGAGTGTTCGTCCTTTGAGGCGCGAATT
GCTCGCTATGGCGGTATTGAGCTCTTCCTGGGTGGCGTGGGTCCAGATGG
GCATATCGCTTTCAATGAACCAGGCTCCTCCTTGAGTAGTCGTACTCGTG
TCAAGACCCTGGCATATGACACAATCCTGGCTAACTCGCGGTTTTTTGGC
AATGACTTGGACTTGGTGCCGCGGAGGTCACTGACCGTGGGTATTCAGAC
TATCATGGATGCTCGCGAAGTAGTCATCGTGGCCACCGGTGCTCACAAGG
CTCTTGCTGTGGAGAAAGGCCTGGAAGGCGGCATCAACCACATGTGGACA
CTCTCAGCGCTGCAGCTACACCCATATGCGCTGATTGTCTGCGACCGAGA
TGCAACTCTGGAGCTGAAGGTCAAGACTGTTCGCTATTTCGAATCAATTG
AACAATCCGGCACGGATGCACGTACTCAGGGTCCGCCTCTTGTCTACAGA
CCCAGGACATATGTTCCTGCCCCAGTGGGTGTCGTGAAACTCCAGCCGCC
GCACATTCCTCAGAAAGCACCCAAGGATCTCCGAATCAACACGGAACTTA
ACACATCGGTAGAAGACGAGGAACTCACACCAGACAGCATGTCTTCACGT
ATGGTTGACTCGGCGATTGGAGGGCTGGATTCGACTCTGAAGGGGGACTT
GTTCTTTGATCACATGGGCTCACGGGTTGCATCGCATTGAATGGAAGTGC
TGCGTCATCGGACAGCTACCTGCCTTCAACCTGATACCTGGGAAGATACA
CTGGTGAACAATTTCGGCTCACGCATTCCTATCAGTCGCATAAAGTCGTT
CAAGCCCAGTGAAGACCGGCCCTTTGTGCTGGGACTCCCGACTGGTAGCA
GTCCTGAGATAATTTATAAGACTCTGGTGCGCCGGCACAGGGACGGTGAT
ATCTCGTTCAGAAATGTCGTAACGTTCAATATGGACGAATACGTTGGACT
GCCTCGTGACCATCCGGAGTCCTACCACAGCTTCATGTACAAGCACTTCT
TCTCCCACGTGGATATTCCGCCCCAGAACATCAATATCCTTGATGGTAAC
GCACCCGATCTCGCAGCTGAGTGTTCGTCCTTTGAGGCGCGAATTGCTCG
CTATGGCGGTATTGAGCTCTTCCTGGGTGGCGTGGGTCCAGATGGGCATA
TCGCTTTCAATGAACCAGGCTCCTCCTTGAGTAGTCGTACTCGTGTCAAG
ACCCTGGCATATGACACAATCCTGGCTAACTCGCGGTTTTTTGGCAATGA
CTTGGACTTGGTGCCGCGGAGGTCACTGACCGTGGGTATTCAGACTATCA
TGGATGCTCGCGAAGTAGTCATCGTGGCCACCGGTGCTCACAAGGCTCTT
GCTGTGGAGAAAGGCCTGGAAGGCGGCATCAACCACATGTGGACACTCTC
AGCGCTGCAGCTACACCCATATGCGCTGATTGTCTGCGACCGAGATGCAA
CTCTGGAGCTGAAGGTCAAGACTGTTCGCTATTTCGAATCAATTGAACAA
TCCGGCACGGATGCACGTACTCAGGGTCCGCCTCTTGTCTACAGACCCAG
GACATATGTTCCTGCCCCAGTGGGTGTCGTGAAACTCCAGCCGCCGCACA
TTCCTCAGAAAGCACCCAAGGATCTCCGAATCAACACGGAACTTAACACA
TCGGTAGAAGACGAGGAACTCACACCAGACAGCATGTCTTCACGTATGGT
TGACTCGGCGATTGGAGGGCTGGATTCGACTCTGAAGGGGGACTTGTTCT
TTGATCACATGGGCTCACGGGTTGCATCGCATTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004342glucosamine-6-phosphate deaminase activity
Vocabulary: Biological Process
TermDefinition
GO:0006044N-acetylglucosamine metabolic process
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
GNPDA1CAN33_12300Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_12300-T1.exon1CAN33_12300-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_12300-T1.exon2CAN33_12300-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_12300-T1.exon3CAN33_12300-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_12300-T1.cdsCAN33_12300-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_12300-T1CAN33_12300-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR037171
DBxrefInterPro:IPR018321
DBxrefInterPro:IPR004547
DBxrefInterPro:IPR006148
DBxrefPFAM:PF01182
ProductGlucosamine-6-phosphate isomerase 1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000010.1supercontigNKJJ01000010.1:78189..80173 +
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