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CAN33_1240-T1, CAN33_1240-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_1240-T1
Unique NameCAN33_1240-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000004.1:718925..719686+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_1240-T1 ID=CAN33_1240-T1|Name=CAN33_1240-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=762bp|location=Sequence derived from alignment at NKJJ01000004.1:718925..719686+ (Aspergillus niger FDAARGOS_311)
ATGCTCTCTCAGAAGGTTGCTCAGCAATCGTTGCGGCGGCGTACGTACTC
ACATCATCCTCTTCAGCTAATCGCGCGACACTGACTTCAATGTTGCAGTT
GCCGTCCAGCAGCCCTACGCTCTGCGTTGGTCTTTGATGAACTCGGTTTC
TCCGGCTGCCGTTGCTCTTGGAAGAACCGTTCAGACTAGGTAAGCTACTA
CGCGTGATTGGGATTCTTATTTGCGACTATTTCGACTTGGGAGGGGTTCG
CGATATCGAACTCGACGTCATGAAGCGAATGTCGCTAAGTGGAGGCGGAA
CACGAATTGCTAACGTTGTCATGCAGACATGCTGCTACCTCCTCCAACTC
CTCCGACCCTACCAAGCTCCTCGCCCAGCAGCGTCTCAACCGCCCCGTCT
CTCCCCACCTTAGCATCTACCGTCCCCAGATCACATGGATCGGCAGTAGT
ATCCACCGTATCACCGGTATTGCGCTGTCCGGAAGTCTCTACCTCTATGC
CAGTGCCTACCTCGCCTCTCCCATGCTCGGCTGGGATCTGGGCTCTGCCT
CCGCCGCCGCCGCTTTCGCCGCTCTCCCTGTTGTCGCCAAGGTTGCCCTG
AAGACTACCATGGCCCTGCCTTTCACCTACCACTGCATGAACGGCGTGCG
CCACCTCATTTGGGATACTGGTGCTGGTCTTACCAACCCCCAGGTCATCA
AGTCCGGCTGGACTGTGGTGGGTTTGAGTACTCTTAGCGCTCTTATTCTT
GCTTTCCTGTGA
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Coding sequence (CDS) from alignment at NKJJ01000004.1:718925..719686+

>CAN33_1240-T1 ID=CAN33_1240-T1|Name=CAN33_1240-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1701bp|location=Sequence derived from alignment at NKJJ01000004.1:718925..719686+ (Aspergillus niger FDAARGOS_311)
ATGCTCTCTCAGAAGGTTGCTCAGCAATCGTTGCGGCGGCTTGCCGTCCA
GCAGCCCTACGCTCTGCGTTGGTCTTTGATGAACTCGGTTTCTCCGGCTG
CCGTTGCTCTTGGAAGAACCGTTCAGACTAGACATGCTGCTACCTCCTCC
AACTCCTCCGACCCTACCAAGCTCCTCGCCCAGCAGCGTCTCAACCGCCC
CGTCTCTCCCCACCTTAGCATCTACCGTCCCCAGATCACATGGATCGGCA
GTAGTATCCACCGTATCACCGGTATTGCGCTGTCCGGAAGTCTCTACCTC
TATGCCAGTGCCTACCTCGCCTCTCCCATGCTCGGCTGGGATCTGGGCTC
TGCCTCCGCCGCCGCCGCTTTCGCCGCTCTCCCTGTTGTCGCCAAGGTTG
CCCTGAAGACTACCATGGCCCTGCCTTTCACCTACCACTGCATGAACGGC
GTGCGCCACCTCATTTGGGATACTGGTGCTGGTCTTACCAACCCCCAGGT
CATCAAGTCCGGCTGGACTGTGGTGGGTTTGAGTACTCTTAGCGCTCTTA
TTCTTGCTTTCCTGTGAATGCTCTCTCAGAAGGTTGCTCAGCAATCGTTG
CGGCGGCTTGCCGTCCAGCAGCCCTACGCTCTGCGTTGGTCTTTGATGAA
CTCGGTTTCTCCGGCTGCCGTTGCTCTTGGAAGAACCGTTCAGACTAGAC
ATGCTGCTACCTCCTCCAACTCCTCCGACCCTACCAAGCTCCTCGCCCAG
CAGCGTCTCAACCGCCCCGTCTCTCCCCACCTTAGCATCTACCGTCCCCA
GATCACATGGATCGGCAGTAGTATCCACCGTATCACCGGTATTGCGCTGT
CCGGAAGTCTCTACCTCTATGCCAGTGCCTACCTCGCCTCTCCCATGCTC
GGCTGGGATCTGGGCTCTGCCTCCGCCGCCGCCGCTTTCGCCGCTCTCCC
TGTTGTCGCCAAGGTTGCCCTGAAGACTACCATGGCCCTGCCTTTCACCT
ACCACTGCATGAACGGCGTGCGCCACCTCATTTGGGATACTGGTGCTGGT
CTTACCAACCCCCAGGTCATCAAGTCCGGCTGGACTGTGGTGGGTTTGAG
TACTCTTAGCGCTCTTATTCTTGCTTTCCTGTGAATGCTCTCTCAGAAGG
TTGCTCAGCAATCGTTGCGGCGGCTTGCCGTCCAGCAGCCCTACGCTCTG
CGTTGGTCTTTGATGAACTCGGTTTCTCCGGCTGCCGTTGCTCTTGGAAG
AACCGTTCAGACTAGACATGCTGCTACCTCCTCCAACTCCTCCGACCCTA
CCAAGCTCCTCGCCCAGCAGCGTCTCAACCGCCCCGTCTCTCCCCACCTT
AGCATCTACCGTCCCCAGATCACATGGATCGGCAGTAGTATCCACCGTAT
CACCGGTATTGCGCTGTCCGGAAGTCTCTACCTCTATGCCAGTGCCTACC
TCGCCTCTCCCATGCTCGGCTGGGATCTGGGCTCTGCCTCCGCCGCCGCC
GCTTTCGCCGCTCTCCCTGTTGTCGCCAAGGTTGCCCTGAAGACTACCAT
GGCCCTGCCTTTCACCTACCACTGCATGAACGGCGTGCGCCACCTCATTT
GGGATACTGGTGCTGGTCTTACCAACCCCCAGGTCATCAAGTCCGGCTGG
ACTGTGGTGGGTTTGAGTACTCTTAGCGCTCTTATTCTTGCTTTCCTGTG
A
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0045281succinate dehydrogenase complex
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0006099tricarboxylic acid cycle
Vocabulary: Molecular Function
TermDefinition
GO:0009055electron transfer activity
GO:0000104succinate dehydrogenase activity
GO:0016627oxidoreductase activity, acting on the CH-CH group of donors
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_1240CAN33_1240Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_1240-T1.exon1CAN33_1240-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_1240-T1.exon2CAN33_1240-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_1240-T1.exon3CAN33_1240-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_1240-T1.cdsCAN33_1240-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_1240-T1CAN33_1240-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR018495
DBxrefInterPro:IPR014314
DBxrefInterPro:IPR034804
DBxrefInterPro:IPR000701
DBxrefPFAM:PF01127
ProductSuccinate dehydrogenase/Fumarate reductase transmembrane subunit family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000004.1supercontigNKJJ01000004.1:718925..719686 +
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