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CAN33_12440-T1, CAN33_12440-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_12440-T1
Unique NameCAN33_12440-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000010.1:173830..174848-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_12440-T1 ID=CAN33_12440-T1|Name=CAN33_12440-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1019bp|location=Sequence derived from alignment at NKJJ01000010.1:173830..174848- (Aspergillus niger FDAARGOS_311)
ATGTTCATTCTTGTTAGTGATCGACTACTACTACTCTCGCTTCTATAAGC
ACCCAGTGCATACCGATAGTGGAGTATGAGCTGACCTGTATCTCACAGAC
TACGGTCTCCGATCTTATCCAGATCTCCCCGGAGGATTTCTCCAAATATA
GCGCGGTGGCTCTCGAGGATAACATCAACGAGAAGTATGCCAACAAAGTA
TGTACTAGCGCGTGAAGTTCCTTTCGTCATGTACTTTAAGCTCAGCACGG
TCTGAGAGCGATGCTTGTGAGCAAACATTGTTGACTCTGTTGTGCATAGG
TTATTCAAAAGATCGGCCTATGTATTGGTTTCTATGACCTGCTAGAGTCT
TCAGATGGTTTGATCGGCCACGGCACTGGACTTGTCAATGTAAATGGTAT
GTTCTGTCTTCTATCTACTCTGATCTTACGGTGTAGCAGAGAGACTGACC
CTATAACAGTCAAATTCCGTCTGATTGTCTTCCGCCCGTTCAAGGGCGAG
ATCATGCTTGGGAAGATCTCGAGTGCGACAGAACATGGCATTAAGGGTGA
GTACTCCGTACATGCCATGTATATGCTTGATGCATGATGTTGACAACTCC
CTAGTTGCCGTGGAATTCTTCAACGATATCCTCGTGCCCCCTGATCTACT
CCTGGATGGCGCCAGATTGTGAGTGTACCACCTATTCCAACTCTGCGATT
TCTCAGCTTACTGACAAATACCAGTGACTACGCGGATCAAGTCTGGATCT
GGGAGAACGAAGATGGCTCCACTTTCTACTTTGATGTTGGTGAAGTTGTT
CGATTCCGCGTTGAGATGGAAGAATGGCACGACCAAATCCCCAATGCACC
GGATCTAGGAGATGCCGCCGCGATCGAGCGGAAACCTCCATATTCGATTA
TTGTGAGTGACTTGCCTTACTCCAAGTATATGATTCTACCTATGTTGAAG
ACAGTCTAACATGTTATGGTATAGGGATCGATGCAAATGGCAGGGTTGGG
TCCGATCTCATGGTGGTGA
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Coding sequence (CDS) from alignment at NKJJ01000010.1:173830..174848-

>CAN33_12440-T1 ID=CAN33_12440-T1|Name=CAN33_12440-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4074bp|location=Sequence derived from alignment at NKJJ01000010.1:173830..174848- (Aspergillus niger FDAARGOS_311)
GGATCGATGCAAATGGCAGGGTTGGGTCCGATCTCATGGTGGTGATGACT
ACGCGGATCAAGTCTGGATCTGGGAGAACGAAGATGGCTCCACTTTCTAC
TTTGATGTTGGTGAAGTTGTTCGATTCCGCGTTGAGATGGAAGAATGGCA
CGACCAAATCCCCAATGCACCGGATCTAGGAGATGCCGCCGCGATCGAGC
GGAAACCTCCATATTCGATTATTTTGCCGTGGAATTCTTCAACGATATCC
TCGTGCCCCCTGATCTACTCCTGGATGGCGCCAGATTTCAAATTCCGTCT
GATTGTCTTCCGCCCGTTCAAGGGCGAGATCATGCTTGGGAAGATCTCGA
GTGCGACAGAACATGGCATTAAGGGTTATTCAAAAGATCGGCCTATGTAT
TGGTTTCTATGACCTGCTAGAGTCTTCAGATGGTTTGATCGGCCACGGCA
CTGGACTTGTCAATGTAAATGACTACGGTCTCCGATCTTATCCAGATCTC
CCCGGAGGATTTCTCCAAATATAGCGCGGTGGCTCTCGAGGATAACATCA
ACGAGAAGTATGCCAACAAAATGTTCATTCTTGGATCGATGCAAATGGCA
GGGTTGGGTCCGATCTCATGGTGGTGATGACTACGCGGATCAAGTCTGGA
TCTGGGAGAACGAAGATGGCTCCACTTTCTACTTTGATGTTGGTGAAGTT
GTTCGATTCCGCGTTGAGATGGAAGAATGGCACGACCAAATCCCCAATGC
ACCGGATCTAGGAGATGCCGCCGCGATCGAGCGGAAACCTCCATATTCGA
TTATTTTGCCGTGGAATTCTTCAACGATATCCTCGTGCCCCCTGATCTAC
TCCTGGATGGCGCCAGATTTCAAATTCCGTCTGATTGTCTTCCGCCCGTT
CAAGGGCGAGATCATGCTTGGGAAGATCTCGAGTGCGACAGAACATGGCA
TTAAGGGTTATTCAAAAGATCGGCCTATGTATTGGTTTCTATGACCTGCT
AGAGTCTTCAGATGGTTTGATCGGCCACGGCACTGGACTTGTCAATGTAA
ATGACTACGGTCTCCGATCTTATCCAGATCTCCCCGGAGGATTTCTCCAA
ATATAGCGCGGTGGCTCTCGAGGATAACATCAACGAGAAGTATGCCAACA
AAATGTTCATTCTTGGATCGATGCAAATGGCAGGGTTGGGTCCGATCTCA
TGGTGGTGATGACTACGCGGATCAAGTCTGGATCTGGGAGAACGAAGATG
GCTCCACTTTCTACTTTGATGTTGGTGAAGTTGTTCGATTCCGCGTTGAG
ATGGAAGAATGGCACGACCAAATCCCCAATGCACCGGATCTAGGAGATGC
CGCCGCGATCGAGCGGAAACCTCCATATTCGATTATTTTGCCGTGGAATT
CTTCAACGATATCCTCGTGCCCCCTGATCTACTCCTGGATGGCGCCAGAT
TTCAAATTCCGTCTGATTGTCTTCCGCCCGTTCAAGGGCGAGATCATGCT
TGGGAAGATCTCGAGTGCGACAGAACATGGCATTAAGGGTTATTCAAAAG
ATCGGCCTATGTATTGGTTTCTATGACCTGCTAGAGTCTTCAGATGGTTT
GATCGGCCACGGCACTGGACTTGTCAATGTAAATGACTACGGTCTCCGAT
CTTATCCAGATCTCCCCGGAGGATTTCTCCAAATATAGCGCGGTGGCTCT
CGAGGATAACATCAACGAGAAGTATGCCAACAAAATGTTCATTCTTGGAT
CGATGCAAATGGCAGGGTTGGGTCCGATCTCATGGTGGTGATGACTACGC
GGATCAAGTCTGGATCTGGGAGAACGAAGATGGCTCCACTTTCTACTTTG
ATGTTGGTGAAGTTGTTCGATTCCGCGTTGAGATGGAAGAATGGCACGAC
CAAATCCCCAATGCACCGGATCTAGGAGATGCCGCCGCGATCGAGCGGAA
ACCTCCATATTCGATTATTTTGCCGTGGAATTCTTCAACGATATCCTCGT
GCCCCCTGATCTACTCCTGGATGGCGCCAGATTTCAAATTCCGTCTGATT
GTCTTCCGCCCGTTCAAGGGCGAGATCATGCTTGGGAAGATCTCGAGTGC
GACAGAACATGGCATTAAGGGTTATTCAAAAGATCGGCCTATGTATTGGT
TTCTATGACCTGCTAGAGTCTTCAGATGGTTTGATCGGCCACGGCACTGG
ACTTGTCAATGTAAATGACTACGGTCTCCGATCTTATCCAGATCTCCCCG
GAGGATTTCTCCAAATATAGCGCGGTGGCTCTCGAGGATAACATCAACGA
GAAGTATGCCAACAAAATGTTCATTCTTGGATCGATGCAAATGGCAGGGT
TGGGTCCGATCTCATGGTGGTGATGACTACGCGGATCAAGTCTGGATCTG
GGAGAACGAAGATGGCTCCACTTTCTACTTTGATGTTGGTGAAGTTGTTC
GATTCCGCGTTGAGATGGAAGAATGGCACGACCAAATCCCCAATGCACCG
GATCTAGGAGATGCCGCCGCGATCGAGCGGAAACCTCCATATTCGATTAT
TTTGCCGTGGAATTCTTCAACGATATCCTCGTGCCCCCTGATCTACTCCT
GGATGGCGCCAGATTTCAAATTCCGTCTGATTGTCTTCCGCCCGTTCAAG
GGCGAGATCATGCTTGGGAAGATCTCGAGTGCGACAGAACATGGCATTAA
GGGTTATTCAAAAGATCGGCCTATGTATTGGTTTCTATGACCTGCTAGAG
TCTTCAGATGGTTTGATCGGCCACGGCACTGGACTTGTCAATGTAAATGA
CTACGGTCTCCGATCTTATCCAGATCTCCCCGGAGGATTTCTCCAAATAT
AGCGCGGTGGCTCTCGAGGATAACATCAACGAGAAGTATGCCAACAAAAT
GTTCATTCTTGGATCGATGCAAATGGCAGGGTTGGGTCCGATCTCATGGT
GGTGATGACTACGCGGATCAAGTCTGGATCTGGGAGAACGAAGATGGCTC
CACTTTCTACTTTGATGTTGGTGAAGTTGTTCGATTCCGCGTTGAGATGG
AAGAATGGCACGACCAAATCCCCAATGCACCGGATCTAGGAGATGCCGCC
GCGATCGAGCGGAAACCTCCATATTCGATTATTTTGCCGTGGAATTCTTC
AACGATATCCTCGTGCCCCCTGATCTACTCCTGGATGGCGCCAGATTTCA
AATTCCGTCTGATTGTCTTCCGCCCGTTCAAGGGCGAGATCATGCTTGGG
AAGATCTCGAGTGCGACAGAACATGGCATTAAGGGTTATTCAAAAGATCG
GCCTATGTATTGGTTTCTATGACCTGCTAGAGTCTTCAGATGGTTTGATC
GGCCACGGCACTGGACTTGTCAATGTAAATGACTACGGTCTCCGATCTTA
TCCAGATCTCCCCGGAGGATTTCTCCAAATATAGCGCGGTGGCTCTCGAG
GATAACATCAACGAGAAGTATGCCAACAAAATGTTCATTCTTGGATCGAT
GCAAATGGCAGGGTTGGGTCCGATCTCATGGTGGTGATGACTACGCGGAT
CAAGTCTGGATCTGGGAGAACGAAGATGGCTCCACTTTCTACTTTGATGT
TGGTGAAGTTGTTCGATTCCGCGTTGAGATGGAAGAATGGCACGACCAAA
TCCCCAATGCACCGGATCTAGGAGATGCCGCCGCGATCGAGCGGAAACCT
CCATATTCGATTATTTTGCCGTGGAATTCTTCAACGATATCCTCGTGCCC
CCTGATCTACTCCTGGATGGCGCCAGATTTCAAATTCCGTCTGATTGTCT
TCCGCCCGTTCAAGGGCGAGATCATGCTTGGGAAGATCTCGAGTGCGACA
GAACATGGCATTAAGGGTTATTCAAAAGATCGGCCTATGTATTGGTTTCT
ATGACCTGCTAGAGTCTTCAGATGGTTTGATCGGCCACGGCACTGGACTT
GTCAATGTAAATGACTACGGTCTCCGATCTTATCCAGATCTCCCCGGAGG
ATTTCTCCAAATATAGCGCGGTGGCTCTCGAGGATAACATCAACGAGAAG
TATGCCAACAAAATGTTCATTCTT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003899DNA-directed 5'-3' RNA polymerase activity
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_12440CAN33_12440Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_12440-T1CAN33_12440-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_12440-T1.cdsCAN33_12440-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_12440-T1.exon7CAN33_12440-T1.exon7Aspergillus niger FDAARGOS_311exon
CAN33_12440-T1.exon6CAN33_12440-T1.exon6Aspergillus niger FDAARGOS_311exon
CAN33_12440-T1.exon5CAN33_12440-T1.exon5Aspergillus niger FDAARGOS_311exon
CAN33_12440-T1.exon4CAN33_12440-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_12440-T1.exon3CAN33_12440-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_12440-T1.exon2CAN33_12440-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_12440-T1.exon1CAN33_12440-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR005576
DBxrefInterPro:IPR036898
DBxrefInterPro:IPR013238
DBxrefPFAM:PF03876
DBxrefPFAM:PF08292
ProductRNA polymerase III subunit Rpc25 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000010.1supercontigNKJJ01000010.1:173830..174848 -
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