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CAN33_1245-T1, CAN33_1245-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_1245-T1
Unique NameCAN33_1245-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000004.1:723391..724359+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_1245-T1 ID=CAN33_1245-T1|Name=CAN33_1245-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=969bp|location=Sequence derived from alignment at NKJJ01000004.1:723391..724359+ (Aspergillus niger FDAARGOS_311)
ATGGCTTCCGTACTATCGACTCGCGCGGTCAGGACCGCCTCCTGCTCCGC
ATGCCGCTCCCTCGCTCGTCCCAACTCCATCGCAGCCGGTCTCCTTCCGC
GGCGAGGACTCTCGACGGCCACCGAAGATGCAGCAGTCAACCATGCAGAC
AAGCCCCGGTGGTCGTACACGCCGCCTCGTGCCAAAGCGCCGTTCTCCTT
GAGACTCAACTCCAACCGCCCCGAGTTCCCCGTGAATTCAGATCCCAAGG
TTCTGGACCGGTTCTACATCCTCATGCTCGGAAACGACGGCGACAAGATG
CTCTCGGAGGAAACCAAGTGGCTCGCAGTGACACACAAGAGTTTTGATCA
GGGCCGGAGAGGTTTCAACGACCGTTTGGCCTTCCTGGGTATGTCAAGTG
TTGCTGTGCAATGAATGGTAACAGGATTGGATACTAATGCGGATGGGGTT
GTACACAGGCAAGCGTATTGTTCAGCTGCAGGCTTCGTTGGCTTTGGTCC
AGAGTCCTAGCAACGCTGCTAACTCTGCCACCCCCGATGCGTATGGCCGG
GTCCCCTTCACTCACCCGGCTTTAGATAGCCTGGACAACCTCGACTACAA
CACGAAGAGCTTCCTTACGAGCAAGACGAAGCTGTCGGAACTTGCTCACA
AGTATGACATGCAGAGAGTTGTGAGATGGTGCCCTCGGAAGGTGAGTCTA
CGGTTCCCGTGCATTAAGACGACATTCGGACACCCTGCGCTGCTGGGCTT
TTGATATTGTCTTGTGAGTTGGTCAATTGGATCCCCTGCTAACAGCGGCG
TGTTTACGTGTAGCCCAACAACCTCGAAAGCTCTGGAATGGACCTCGTTC
TCGCCCACACGATGTACGCTGTGATCGGTGCCATCTCCCTGGAGAAGGGC
AATGCTGTTGCGAACAAGGTGGCCCGTGAGCGCATATTAGCACCTCTGGG
ATTCAAGATCGCGGCTTGA
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Coding sequence (CDS) from alignment at NKJJ01000004.1:723391..724359+

>CAN33_1245-T1 ID=CAN33_1245-T1|Name=CAN33_1245-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2331bp|location=Sequence derived from alignment at NKJJ01000004.1:723391..724359+ (Aspergillus niger FDAARGOS_311)
ATGGCTTCCGTACTATCGACTCGCGCGGTCAGGACCGCCTCCTGCTCCGC
ATGCCGCTCCCTCGCTCGTCCCAACTCCATCGCAGCCGGTCTCCTTCCGC
GGCGAGGACTCTCGACGGCCACCGAAGATGCAGCAGTCAACCATGCAGAC
AAGCCCCGGTGGTCGTACACGCCGCCTCGTGCCAAAGCGCCGTTCTCCTT
GAGACTCAACTCCAACCGCCCCGAGTTCCCCGTGAATTCAGATCCCAAGG
TTCTGGACCGGTTCTACATCCTCATGCTCGGAAACGACGGCGACAAGATG
CTCTCGGAGGAAACCAAGTGGCTCGCAGTGACACACAAGAGTTTTGATCA
GGGCCGGAGAGGTTTCAACGACCGTTTGGCCTTCCTGGGCAAGCGTATTG
TTCAGCTGCAGGCTTCGTTGGCTTTGGTCCAGAGTCCTAGCAACGCTGCT
AACTCTGCCACCCCCGATGCGTATGGCCGGGTCCCCTTCACTCACCCGGC
TTTAGATAGCCTGGACAACCTCGACTACAACACGAAGAGCTTCCTTACGA
GCAAGACGAAGCTGTCGGAACTTGCTCACAAGTATGACATGCAGAGAGTT
GTGAGATGGTGCCCTCGGAAGCCCAACAACCTCGAAAGCTCTGGAATGGA
CCTCGTTCTCGCCCACACGATGTACGCTGTGATCGGTGCCATCTCCCTGG
AGAAGGGCAATGCTGTTGCGAACAAGGTGGCCCGTGAGCGCATATTAGCA
CCTCTGGGATTCAAGATCGCGGCTTGAATGGCTTCCGTACTATCGACTCG
CGCGGTCAGGACCGCCTCCTGCTCCGCATGCCGCTCCCTCGCTCGTCCCA
ACTCCATCGCAGCCGGTCTCCTTCCGCGGCGAGGACTCTCGACGGCCACC
GAAGATGCAGCAGTCAACCATGCAGACAAGCCCCGGTGGTCGTACACGCC
GCCTCGTGCCAAAGCGCCGTTCTCCTTGAGACTCAACTCCAACCGCCCCG
AGTTCCCCGTGAATTCAGATCCCAAGGTTCTGGACCGGTTCTACATCCTC
ATGCTCGGAAACGACGGCGACAAGATGCTCTCGGAGGAAACCAAGTGGCT
CGCAGTGACACACAAGAGTTTTGATCAGGGCCGGAGAGGTTTCAACGACC
GTTTGGCCTTCCTGGGCAAGCGTATTGTTCAGCTGCAGGCTTCGTTGGCT
TTGGTCCAGAGTCCTAGCAACGCTGCTAACTCTGCCACCCCCGATGCGTA
TGGCCGGGTCCCCTTCACTCACCCGGCTTTAGATAGCCTGGACAACCTCG
ACTACAACACGAAGAGCTTCCTTACGAGCAAGACGAAGCTGTCGGAACTT
GCTCACAAGTATGACATGCAGAGAGTTGTGAGATGGTGCCCTCGGAAGCC
CAACAACCTCGAAAGCTCTGGAATGGACCTCGTTCTCGCCCACACGATGT
ACGCTGTGATCGGTGCCATCTCCCTGGAGAAGGGCAATGCTGTTGCGAAC
AAGGTGGCCCGTGAGCGCATATTAGCACCTCTGGGATTCAAGATCGCGGC
TTGAATGGCTTCCGTACTATCGACTCGCGCGGTCAGGACCGCCTCCTGCT
CCGCATGCCGCTCCCTCGCTCGTCCCAACTCCATCGCAGCCGGTCTCCTT
CCGCGGCGAGGACTCTCGACGGCCACCGAAGATGCAGCAGTCAACCATGC
AGACAAGCCCCGGTGGTCGTACACGCCGCCTCGTGCCAAAGCGCCGTTCT
CCTTGAGACTCAACTCCAACCGCCCCGAGTTCCCCGTGAATTCAGATCCC
AAGGTTCTGGACCGGTTCTACATCCTCATGCTCGGAAACGACGGCGACAA
GATGCTCTCGGAGGAAACCAAGTGGCTCGCAGTGACACACAAGAGTTTTG
ATCAGGGCCGGAGAGGTTTCAACGACCGTTTGGCCTTCCTGGGCAAGCGT
ATTGTTCAGCTGCAGGCTTCGTTGGCTTTGGTCCAGAGTCCTAGCAACGC
TGCTAACTCTGCCACCCCCGATGCGTATGGCCGGGTCCCCTTCACTCACC
CGGCTTTAGATAGCCTGGACAACCTCGACTACAACACGAAGAGCTTCCTT
ACGAGCAAGACGAAGCTGTCGGAACTTGCTCACAAGTATGACATGCAGAG
AGTTGTGAGATGGTGCCCTCGGAAGCCCAACAACCTCGAAAGCTCTGGAA
TGGACCTCGTTCTCGCCCACACGATGTACGCTGTGATCGGTGCCATCTCC
CTGGAGAAGGGCAATGCTGTTGCGAACAAGGTGGCCCGTGAGCGCATATT
AGCACCTCTGGGATTCAAGATCGCGGCTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006396RNA processing
Vocabulary: Molecular Function
TermDefinition
GO:0004525ribonuclease III activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_1245CAN33_1245Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_1245-T1.exon1CAN33_1245-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_1245-T1.exon2CAN33_1245-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_1245-T1.exon3CAN33_1245-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_1245-T1.cdsCAN33_1245-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_1245-T1CAN33_1245-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036389
DBxrefInterPro:IPR000999
DBxrefPFAM:PF14622
DBxrefPFAM:PF00636
ProductRibonuclease III domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000004.1supercontigNKJJ01000004.1:723391..724359 +
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