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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000004.1:725523..727545+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_1250-T1 ID=CAN33_1250-T1|Name=CAN33_1250-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2023bp|location=Sequence derived from alignment at NKJJ01000004.1:725523..727545+ (Aspergillus niger FDAARGOS_311)
ATGGCGTCGGCCATCTTCTTCCTCGATCTCAAGGGCAAGGTATGAACCCC
CGTGGAGGTTGCGCTGTCATGAACAATTCCGCCGTGATCCCCTGGAACCT
GACCGTTTATTTAGACCCTTCTAGCCCGAAACTACCGCGGAGACATCCCC
ATGTCCGCCGTCGAAAATTTCCCCATCCTACTCAGTGACGCCGAAGAAGA
GAGCTCCGCCGTGGCTCCGTGCTTTTCCCACGAAGGAATTAACGTACGTA
TTTGTGTCTCCGACTCGTGGCTGCGGCGGCGCACCTGCACCTCCCCCCGC
CGTTCCCCGCAACCCGCTGTGTCTACCATCTCCCACATCAGCCCTGCGCG
CATACCCAGAAAGGAACCCAGAAGCATGGAGGTCAATTGCTGAGAATTCC
GCCTTTCCTAGTACCTCTACATCCGTCACAGCAACCTTTACATTCTTGCC
CTGACTAAGAAGAACACCAATGCCACCGAGATCCTCCTTTTCCTGCATAA
GATCGTGGAGGTGTTCACGGAATACTTCAAGGTACTGGAGGAGGAGAGTA
TCCGCGATAACTTTGTCATCATCTATGAATTGCTCGATGAGATGATGGAC
TTTGGATATCCGCAGACGACGGAGAGCAAGATATTGCAAGAGTAAGACGG
ACCCGTCTTTGAGACTACGAGTAATGGAGGACCACAGCTGACGATTCCAT
GGCAGATACATTACCCAAGAATCACACAAGCTGGAGATCCAAGCCCGACC
ACCCATTGCTGTCACCAATGCCGTGTCATGGCGAAGTGAGGGTATCCGGT
ACCGCAAGAACGAAGTCTTCCTTGATGTTGTGGAGTCCCTTAACCTCCTC
GTGTCCGCGTCTGGTAACGTGTTGCGATCGGAGATTCTCGGAGCTATCAA
GATGAAGTGTTATCTGAGTGGTATGCCGGAGCTTCGTCTGGGCTTGAACG
ACAAGGTCATGTTCGAAACCACGGGTCGCGCAACAAGAGGAAAGGCCGTC
GAGATGGAGGACGTCAAGTTCCATCAGTGTGTCCGACTTTCTCGGTTCGA
GAATGACCGCACCATCAGCTTCATTCCCCCGGATGGCGAGTTCGAGCTGA
TGAGCTACCGGTTGAACACCCAAGTCAAGCCTCTGATTTGGGTGGAATGT
CTGGTGGAGTCGCACTCTGGTTCGCGCATGGAGTATATGTTGAAGGTGCG
GCCCAGCTCCCTGCCTATAATACTAGAGAGACATATCACCAAGCTAACGT
CACTCCTCCCAAACAGGCCAAGGCCCAATTCAAGCGCCGCAGCACTGCCA
ACAACGTAGAAATCCTCGTCCCAGTCCCAGAAGATGCCGACTCACCCCGT
TTCCGCACCAACATCGGAACCGTGCACTACGCGCCTGAGAAATCCGCCAT
CATCTGGAAGATCAAGCAGTTCGGCGGAGGCAAGGAGTTCCTCATGCGCG
CAGAGCTGGGTCTGCCGTCCGTAAAGGGCGACGACGAGCACGGCGGTGGC
ATGACCGGCGGTTTCGGAGGTAGCATGGGTGGAACTGGGCAGGGCAAGGC
AAAGCGGCCGATCAACGTCAAATTCGAAATCCCTTACTTCACTACTAGCG
GTATCCAAGTCCGGTACTTGAAGATCACGGAACCTAAGGTATGTCCATAA
ATCCATGTCAACTCCCTTCCCTTCAACAACCCACCATCAGTTGGATTGGA
AGCCTTGTCGCACAAGCACAATGCAATGCAATGGATGCTAACGAATGACC
CAATGAATGCAGCTACAATACCCCTCCCTCCCATGGGTGCGATATATAAC
ACAATCAGGCGACATTGCTGTCCGCATGCCAGATGTACAATGATGTAAAG
CGTTTCTTTCTTCTATTTCTTTCTTCTTTAGTTTCATTCAATAGATATAC
TTTCTCTCTTTTCTTTGCATCAAGCATGGATCATTCATCTGTTGATGGAG
TGTACTCCTCGTACAGATTTGATGCACTAGCACATGATCCTCGACTGACT
GAATGTAGTGGTGCAACTGGTAG back to topCoding sequence (CDS) from alignment at NKJJ01000004.1:725523..727545+ >CAN33_1250-T1 ID=CAN33_1250-T1|Name=CAN33_1250-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=7650bp|location=Sequence derived from alignment at NKJJ01000004.1:725523..727545+ (Aspergillus niger FDAARGOS_311)
ATGGCGTCGGCCATCTTCTTCCTCGATCTCAAGGGCAAGACCCTTCTAGC
CCGAAACTACCGCGGAGACATCCCCATGTCCGCCGTCGAAAATTTCCCCA
TCCTACTCAGTGACGCCGAAGAAGAGAGCTCCGCCGTGGCTCCGTGCTTT
TCCCACGAAGGAATTAACTACCTCTACATCCGTCACAGCAACCTTTACAT
TCTTGCCCTGACTAAGAAGAACACCAATGCCACCGAGATCCTCCTTTTCC
TGCATAAGATCGTGGAGGTGTTCACGGAATACTTCAAGGTACTGGAGGAG
GAGAGTATCCGCGATAACTTTGTCATCATCTATGAATTGCTCGATGAGAT
GATGGACTTTGGATATCCGCAGACGACGGAGAGCAAGATATTGCAAGAAT
ACATTACCCAAGAATCACACAAGCTGGAGATCCAAGCCCGACCACCCATT
GCTGTCACCAATGCCGTGTCATGGCGAAGTGAGGGTATCCGGTACCGCAA
GAACGAAGTCTTCCTTGATGTTGTGGAGTCCCTTAACCTCCTCGTGTCCG
CGTCTGGTAACGTGTTGCGATCGGAGATTCTCGGAGCTATCAAGATGAAG
TGTTATCTGAGTGGTATGCCGGAGCTTCGTCTGGGCTTGAACGACAAGGT
CATGTTCGAAACCACGGGTCGCGCAACAAGAGGAAAGGCCGTCGAGATGG
AGGACGTCAAGTTCCATCAGTGTGTCCGACTTTCTCGGTTCGAGAATGAC
CGCACCATCAGCTTCATTCCCCCGGATGGCGAGTTCGAGCTGATGAGCTA
CCGGTTGAACACCCAAGTCAAGCCTCTGATTTGGGTGGAATGTCTGGTGG
AGTCGCACTCTGGTTCGCGCATGGAGTATATGTTGAAGGCCAAGGCCCAA
TTCAAGCGCCGCAGCACTGCCAACAACGTAGAAATCCTCGTCCCAGTCCC
AGAAGATGCCGACTCACCCCGTTTCCGCACCAACATCGGAACCGTGCACT
ACGCGCCTGAGAAATCCGCCATCATCTGGAAGATCAAGCAGTTCGGCGGA
GGCAAGGAGTTCCTCATGCGCGCAGAGCTGGGTCTGCCGTCCGTAAAGGG
CGACGACGAGCACGGCGGTGGCATGACCGGCGGTTTCGGAGGTAGCATGG
GTGGAACTGGGCAGGGCAAGGCAAAGCGGCCGATCAACGTCAAATTCGAA
ATCCCTTACTTCACTACTAGCGGTATCCAAGTCCGGTACTTGAAGATCAC
GGAACCTAAGTGGTGCAACTGGTAGATGGCGTCGGCCATCTTCTTCCTCG
ATCTCAAGGGCAAGACCCTTCTAGCCCGAAACTACCGCGGAGACATCCCC
ATGTCCGCCGTCGAAAATTTCCCCATCCTACTCAGTGACGCCGAAGAAGA
GAGCTCCGCCGTGGCTCCGTGCTTTTCCCACGAAGGAATTAACTACCTCT
ACATCCGTCACAGCAACCTTTACATTCTTGCCCTGACTAAGAAGAACACC
AATGCCACCGAGATCCTCCTTTTCCTGCATAAGATCGTGGAGGTGTTCAC
GGAATACTTCAAGGTACTGGAGGAGGAGAGTATCCGCGATAACTTTGTCA
TCATCTATGAATTGCTCGATGAGATGATGGACTTTGGATATCCGCAGACG
ACGGAGAGCAAGATATTGCAAGAATACATTACCCAAGAATCACACAAGCT
GGAGATCCAAGCCCGACCACCCATTGCTGTCACCAATGCCGTGTCATGGC
GAAGTGAGGGTATCCGGTACCGCAAGAACGAAGTCTTCCTTGATGTTGTG
GAGTCCCTTAACCTCCTCGTGTCCGCGTCTGGTAACGTGTTGCGATCGGA
GATTCTCGGAGCTATCAAGATGAAGTGTTATCTGAGTGGTATGCCGGAGC
TTCGTCTGGGCTTGAACGACAAGGTCATGTTCGAAACCACGGGTCGCGCA
ACAAGAGGAAAGGCCGTCGAGATGGAGGACGTCAAGTTCCATCAGTGTGT
CCGACTTTCTCGGTTCGAGAATGACCGCACCATCAGCTTCATTCCCCCGG
ATGGCGAGTTCGAGCTGATGAGCTACCGGTTGAACACCCAAGTCAAGCCT
CTGATTTGGGTGGAATGTCTGGTGGAGTCGCACTCTGGTTCGCGCATGGA
GTATATGTTGAAGGCCAAGGCCCAATTCAAGCGCCGCAGCACTGCCAACA
ACGTAGAAATCCTCGTCCCAGTCCCAGAAGATGCCGACTCACCCCGTTTC
CGCACCAACATCGGAACCGTGCACTACGCGCCTGAGAAATCCGCCATCAT
CTGGAAGATCAAGCAGTTCGGCGGAGGCAAGGAGTTCCTCATGCGCGCAG
AGCTGGGTCTGCCGTCCGTAAAGGGCGACGACGAGCACGGCGGTGGCATG
ACCGGCGGTTTCGGAGGTAGCATGGGTGGAACTGGGCAGGGCAAGGCAAA
GCGGCCGATCAACGTCAAATTCGAAATCCCTTACTTCACTACTAGCGGTA
TCCAAGTCCGGTACTTGAAGATCACGGAACCTAAGTGGTGCAACTGGTAG
ATGGCGTCGGCCATCTTCTTCCTCGATCTCAAGGGCAAGACCCTTCTAGC
CCGAAACTACCGCGGAGACATCCCCATGTCCGCCGTCGAAAATTTCCCCA
TCCTACTCAGTGACGCCGAAGAAGAGAGCTCCGCCGTGGCTCCGTGCTTT
TCCCACGAAGGAATTAACTACCTCTACATCCGTCACAGCAACCTTTACAT
TCTTGCCCTGACTAAGAAGAACACCAATGCCACCGAGATCCTCCTTTTCC
TGCATAAGATCGTGGAGGTGTTCACGGAATACTTCAAGGTACTGGAGGAG
GAGAGTATCCGCGATAACTTTGTCATCATCTATGAATTGCTCGATGAGAT
GATGGACTTTGGATATCCGCAGACGACGGAGAGCAAGATATTGCAAGAAT
ACATTACCCAAGAATCACACAAGCTGGAGATCCAAGCCCGACCACCCATT
GCTGTCACCAATGCCGTGTCATGGCGAAGTGAGGGTATCCGGTACCGCAA
GAACGAAGTCTTCCTTGATGTTGTGGAGTCCCTTAACCTCCTCGTGTCCG
CGTCTGGTAACGTGTTGCGATCGGAGATTCTCGGAGCTATCAAGATGAAG
TGTTATCTGAGTGGTATGCCGGAGCTTCGTCTGGGCTTGAACGACAAGGT
CATGTTCGAAACCACGGGTCGCGCAACAAGAGGAAAGGCCGTCGAGATGG
AGGACGTCAAGTTCCATCAGTGTGTCCGACTTTCTCGGTTCGAGAATGAC
CGCACCATCAGCTTCATTCCCCCGGATGGCGAGTTCGAGCTGATGAGCTA
CCGGTTGAACACCCAAGTCAAGCCTCTGATTTGGGTGGAATGTCTGGTGG
AGTCGCACTCTGGTTCGCGCATGGAGTATATGTTGAAGGCCAAGGCCCAA
TTCAAGCGCCGCAGCACTGCCAACAACGTAGAAATCCTCGTCCCAGTCCC
AGAAGATGCCGACTCACCCCGTTTCCGCACCAACATCGGAACCGTGCACT
ACGCGCCTGAGAAATCCGCCATCATCTGGAAGATCAAGCAGTTCGGCGGA
GGCAAGGAGTTCCTCATGCGCGCAGAGCTGGGTCTGCCGTCCGTAAAGGG
CGACGACGAGCACGGCGGTGGCATGACCGGCGGTTTCGGAGGTAGCATGG
GTGGAACTGGGCAGGGCAAGGCAAAGCGGCCGATCAACGTCAAATTCGAA
ATCCCTTACTTCACTACTAGCGGTATCCAAGTCCGGTACTTGAAGATCAC
GGAACCTAAGTGGTGCAACTGGTAGATGGCGTCGGCCATCTTCTTCCTCG
ATCTCAAGGGCAAGACCCTTCTAGCCCGAAACTACCGCGGAGACATCCCC
ATGTCCGCCGTCGAAAATTTCCCCATCCTACTCAGTGACGCCGAAGAAGA
GAGCTCCGCCGTGGCTCCGTGCTTTTCCCACGAAGGAATTAACTACCTCT
ACATCCGTCACAGCAACCTTTACATTCTTGCCCTGACTAAGAAGAACACC
AATGCCACCGAGATCCTCCTTTTCCTGCATAAGATCGTGGAGGTGTTCAC
GGAATACTTCAAGGTACTGGAGGAGGAGAGTATCCGCGATAACTTTGTCA
TCATCTATGAATTGCTCGATGAGATGATGGACTTTGGATATCCGCAGACG
ACGGAGAGCAAGATATTGCAAGAATACATTACCCAAGAATCACACAAGCT
GGAGATCCAAGCCCGACCACCCATTGCTGTCACCAATGCCGTGTCATGGC
GAAGTGAGGGTATCCGGTACCGCAAGAACGAAGTCTTCCTTGATGTTGTG
GAGTCCCTTAACCTCCTCGTGTCCGCGTCTGGTAACGTGTTGCGATCGGA
GATTCTCGGAGCTATCAAGATGAAGTGTTATCTGAGTGGTATGCCGGAGC
TTCGTCTGGGCTTGAACGACAAGGTCATGTTCGAAACCACGGGTCGCGCA
ACAAGAGGAAAGGCCGTCGAGATGGAGGACGTCAAGTTCCATCAGTGTGT
CCGACTTTCTCGGTTCGAGAATGACCGCACCATCAGCTTCATTCCCCCGG
ATGGCGAGTTCGAGCTGATGAGCTACCGGTTGAACACCCAAGTCAAGCCT
CTGATTTGGGTGGAATGTCTGGTGGAGTCGCACTCTGGTTCGCGCATGGA
GTATATGTTGAAGGCCAAGGCCCAATTCAAGCGCCGCAGCACTGCCAACA
ACGTAGAAATCCTCGTCCCAGTCCCAGAAGATGCCGACTCACCCCGTTTC
CGCACCAACATCGGAACCGTGCACTACGCGCCTGAGAAATCCGCCATCAT
CTGGAAGATCAAGCAGTTCGGCGGAGGCAAGGAGTTCCTCATGCGCGCAG
AGCTGGGTCTGCCGTCCGTAAAGGGCGACGACGAGCACGGCGGTGGCATG
ACCGGCGGTTTCGGAGGTAGCATGGGTGGAACTGGGCAGGGCAAGGCAAA
GCGGCCGATCAACGTCAAATTCGAAATCCCTTACTTCACTACTAGCGGTA
TCCAAGTCCGGTACTTGAAGATCACGGAACCTAAGTGGTGCAACTGGTAG
ATGGCGTCGGCCATCTTCTTCCTCGATCTCAAGGGCAAGACCCTTCTAGC
CCGAAACTACCGCGGAGACATCCCCATGTCCGCCGTCGAAAATTTCCCCA
TCCTACTCAGTGACGCCGAAGAAGAGAGCTCCGCCGTGGCTCCGTGCTTT
TCCCACGAAGGAATTAACTACCTCTACATCCGTCACAGCAACCTTTACAT
TCTTGCCCTGACTAAGAAGAACACCAATGCCACCGAGATCCTCCTTTTCC
TGCATAAGATCGTGGAGGTGTTCACGGAATACTTCAAGGTACTGGAGGAG
GAGAGTATCCGCGATAACTTTGTCATCATCTATGAATTGCTCGATGAGAT
GATGGACTTTGGATATCCGCAGACGACGGAGAGCAAGATATTGCAAGAAT
ACATTACCCAAGAATCACACAAGCTGGAGATCCAAGCCCGACCACCCATT
GCTGTCACCAATGCCGTGTCATGGCGAAGTGAGGGTATCCGGTACCGCAA
GAACGAAGTCTTCCTTGATGTTGTGGAGTCCCTTAACCTCCTCGTGTCCG
CGTCTGGTAACGTGTTGCGATCGGAGATTCTCGGAGCTATCAAGATGAAG
TGTTATCTGAGTGGTATGCCGGAGCTTCGTCTGGGCTTGAACGACAAGGT
CATGTTCGAAACCACGGGTCGCGCAACAAGAGGAAAGGCCGTCGAGATGG
AGGACGTCAAGTTCCATCAGTGTGTCCGACTTTCTCGGTTCGAGAATGAC
CGCACCATCAGCTTCATTCCCCCGGATGGCGAGTTCGAGCTGATGAGCTA
CCGGTTGAACACCCAAGTCAAGCCTCTGATTTGGGTGGAATGTCTGGTGG
AGTCGCACTCTGGTTCGCGCATGGAGTATATGTTGAAGGCCAAGGCCCAA
TTCAAGCGCCGCAGCACTGCCAACAACGTAGAAATCCTCGTCCCAGTCCC
AGAAGATGCCGACTCACCCCGTTTCCGCACCAACATCGGAACCGTGCACT
ACGCGCCTGAGAAATCCGCCATCATCTGGAAGATCAAGCAGTTCGGCGGA
GGCAAGGAGTTCCTCATGCGCGCAGAGCTGGGTCTGCCGTCCGTAAAGGG
CGACGACGAGCACGGCGGTGGCATGACCGGCGGTTTCGGAGGTAGCATGG
GTGGAACTGGGCAGGGCAAGGCAAAGCGGCCGATCAACGTCAAATTCGAA
ATCCCTTACTTCACTACTAGCGGTATCCAAGTCCGGTACTTGAAGATCAC
GGAACCTAAGTGGTGCAACTGGTAGATGGCGTCGGCCATCTTCTTCCTCG
ATCTCAAGGGCAAGACCCTTCTAGCCCGAAACTACCGCGGAGACATCCCC
ATGTCCGCCGTCGAAAATTTCCCCATCCTACTCAGTGACGCCGAAGAAGA
GAGCTCCGCCGTGGCTCCGTGCTTTTCCCACGAAGGAATTAACTACCTCT
ACATCCGTCACAGCAACCTTTACATTCTTGCCCTGACTAAGAAGAACACC
AATGCCACCGAGATCCTCCTTTTCCTGCATAAGATCGTGGAGGTGTTCAC
GGAATACTTCAAGGTACTGGAGGAGGAGAGTATCCGCGATAACTTTGTCA
TCATCTATGAATTGCTCGATGAGATGATGGACTTTGGATATCCGCAGACG
ACGGAGAGCAAGATATTGCAAGAATACATTACCCAAGAATCACACAAGCT
GGAGATCCAAGCCCGACCACCCATTGCTGTCACCAATGCCGTGTCATGGC
GAAGTGAGGGTATCCGGTACCGCAAGAACGAAGTCTTCCTTGATGTTGTG
GAGTCCCTTAACCTCCTCGTGTCCGCGTCTGGTAACGTGTTGCGATCGGA
GATTCTCGGAGCTATCAAGATGAAGTGTTATCTGAGTGGTATGCCGGAGC
TTCGTCTGGGCTTGAACGACAAGGTCATGTTCGAAACCACGGGTCGCGCA
ACAAGAGGAAAGGCCGTCGAGATGGAGGACGTCAAGTTCCATCAGTGTGT
CCGACTTTCTCGGTTCGAGAATGACCGCACCATCAGCTTCATTCCCCCGG
ATGGCGAGTTCGAGCTGATGAGCTACCGGTTGAACACCCAAGTCAAGCCT
CTGATTTGGGTGGAATGTCTGGTGGAGTCGCACTCTGGTTCGCGCATGGA
GTATATGTTGAAGGCCAAGGCCCAATTCAAGCGCCGCAGCACTGCCAACA
ACGTAGAAATCCTCGTCCCAGTCCCAGAAGATGCCGACTCACCCCGTTTC
CGCACCAACATCGGAACCGTGCACTACGCGCCTGAGAAATCCGCCATCAT
CTGGAAGATCAAGCAGTTCGGCGGAGGCAAGGAGTTCCTCATGCGCGCAG
AGCTGGGTCTGCCGTCCGTAAAGGGCGACGACGAGCACGGCGGTGGCATG
ACCGGCGGTTTCGGAGGTAGCATGGGTGGAACTGGGCAGGGCAAGGCAAA
GCGGCCGATCAACGTCAAATTCGAAATCCCTTACTTCACTACTAGCGGTA
TCCAAGTCCGGTACTTGAAGATCACGGAACCTAAGTGGTGCAACTGGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0030131 | clathrin adaptor complex |
Vocabulary: Biological Process
| Term | Definition |
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| GO:0016192 | vesicle-mediated transport |
| GO:0006886 | intracellular protein transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036168 |
| DBxref | InterPro:IPR011012 |
| DBxref | InterPro:IPR018240 |
| DBxref | InterPro:IPR022775 |
| DBxref | InterPro:IPR028565 |
| DBxref | InterPro:IPR001392 |
| DBxref | PFAM:PF01217 |
| DBxref | PFAM:PF00928 |
| Product | AP-1 complex subunit mu-1-Iike |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000004.1 | supercontig | NKJJ01000004.1:725523..727545 + |
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