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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000010.1:424645..425717- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_12845-T1 ID=CAN33_12845-T1|Name=CAN33_12845-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1073bp|location=Sequence derived from alignment at NKJJ01000010.1:424645..425717- (Aspergillus niger FDAARGOS_311)
ATGGCTCTGGTGCAATATTCTGAATCAGAATCCGAAGTAGAGAACGAGCT
TCCTCAGCGCCCAACAAAAAGGCCCCGTCAGGCCGCCAACAATCCATCTT
CCTCACTCCCACCTTTACCTGCCGCTTTTCACGATCTCTATGCCTCCAGC
ACTCGCGTCAGCGTGACCGACGACCCCAGTCTCCACGGAGGCCGAAAAAG
GGTCATTCCCCATGTTGAAGGGAACTGGCCGACCCACATCTACTTGGAGT
GTATGTGTCATCCATCACCACCACCAGCACCCTCTGGCAGTAGTTGAGCC
CTCGAGAACGGAAATAACAGCCGTATAACCAATCCACAGGGTATCCATCC
AAAGATGAGCTTTCTATTCTTAGCGATGTCATAGATCAGATCAATGATAG
GCTCGATGGGAGCACGATTCAGCTCCACAGCCTACTACATAGTGATCTTG
GCGCACAACTGCCCCTCCACATTAGTCTGTCTAGACCAGTCGTGCTACGA
ACAGAACAGCGGCAGTCATTCTTGGAGCTATTTCAGTCTCAGCTGAAAGA
ATCGCAAATTCCAGCGTAAGTAGCTGACTTGTTTATTTGTTTCGGTCTTA
ATGTTTTTGTGATTGATCAATCCACCATGCTGACAAGCTATGCAAGGTTC
AACGTCACGACAAATAGCCTCGACTGTGTCTCGAATTACGAGAAGACGCG
GTGGTTTTATGTCTTACGTGCTGAAAAGCCAGAGGGAAATGCTTTGAACC
GTCTTCTTCGGCTGTCTAATCGAGCCCTGGCTCGGTTCGAACAGCCTCCG
CTATACGAGTCGTCACAGGATGTGGCGGCTGTGCGGAAGTCAAATGGTGG
TGGTACGACACTGCCACGGGAATCGAGCGATTCTGGCCAAACCGGAGCTG
ACTACTCTCACTGCTTTCATATCTCGTTGGCGTGGAGCTTGACAGGTCTG
TCGTCTGCAGAGAGTGAGCTGATCGGAGGTGTGGATTTGCAGAAGGTACG
TGAGTTGAGTGTGCGGTTTGATTGTGTCAAGGTGAAAGTTGGAAACCATG
TTTCTAGTATACCGCTGCAGTAG back to topCoding sequence (CDS) from alignment at NKJJ01000010.1:424645..425717- >CAN33_12845-T1 ID=CAN33_12845-T1|Name=CAN33_12845-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2709bp|location=Sequence derived from alignment at NKJJ01000010.1:424645..425717- (Aspergillus niger FDAARGOS_311)
GTTCAACGTCACGACAAATAGCCTCGACTGTGTCTCGAATTACGAGAAGA
CGCGGTGGTTTTATGTCTTACGTGCTGAAAAGCCAGAGGGAAATGCTTTG
AACCGTCTTCTTCGGCTGTCTAATCGAGCCCTGGCTCGGTTCGAACAGCC
TCCGCTATACGAGTCGTCACAGGATGTGGCGGCTGTGCGGAAGTCAAATG
GTGGTGGTACGACACTGCCACGGGAATCGAGCGATTCTGGCCAAACCGGA
GCTGACTACTCTCACTGCTTTCATATCTCGTTGGCGTGGAGCTTGACAGG
TCTGTCGTCTGCAGAGAGTGAGCTGATCGGAGGTGTGGATTTGCAGAAGG
TACGTGAGTTGAGTGTGCGGTTTGATTGTGTCAAGGTGAAAGTTGGAAAC
CATGTTTCTAGTATACCGCTGCAGTAGGGTATCCATCCAAAGATGAGCTT
TCTATTCTTAGCGATGTCATAGATCAGATCAATGATAGGCTCGATGGGAG
CACGATTCAGCTCCACAGCCTACTACATAGTGATCTTGGCGCACAACTGC
CCCTCCACATTAGTCTGTCTAGACCAGTCGTGCTACGAACAGAACAGCGG
CAGTCATTCTTGGAGCTATTTCAGTCTCAGCTGAAAGAATCGCAAATTCC
AGCATGGCTCTGGTGCAATATTCTGAATCAGAATCCGAAGTAGAGAACGA
GCTTCCTCAGCGCCCAACAAAAAGGCCCCGTCAGGCCGCCAACAATCCAT
CTTCCTCACTCCCACCTTTACCTGCCGCTTTTCACGATCTCTATGCCTCC
AGCACTCGCGTCAGCGTGACCGACGACCCCAGTCTCCACGGAGGCCGAAA
AAGGGTCATTCCCCATGTTGAAGGGAACTGGCCGACCCACATCTACTTGG
AGTGTTCAACGTCACGACAAATAGCCTCGACTGTGTCTCGAATTACGAGA
AGACGCGGTGGTTTTATGTCTTACGTGCTGAAAAGCCAGAGGGAAATGCT
TTGAACCGTCTTCTTCGGCTGTCTAATCGAGCCCTGGCTCGGTTCGAACA
GCCTCCGCTATACGAGTCGTCACAGGATGTGGCGGCTGTGCGGAAGTCAA
ATGGTGGTGGTACGACACTGCCACGGGAATCGAGCGATTCTGGCCAAACC
GGAGCTGACTACTCTCACTGCTTTCATATCTCGTTGGCGTGGAGCTTGAC
AGGTCTGTCGTCTGCAGAGAGTGAGCTGATCGGAGGTGTGGATTTGCAGA
AGGTACGTGAGTTGAGTGTGCGGTTTGATTGTGTCAAGGTGAAAGTTGGA
AACCATGTTTCTAGTATACCGCTGCAGTAGGGTATCCATCCAAAGATGAG
CTTTCTATTCTTAGCGATGTCATAGATCAGATCAATGATAGGCTCGATGG
GAGCACGATTCAGCTCCACAGCCTACTACATAGTGATCTTGGCGCACAAC
TGCCCCTCCACATTAGTCTGTCTAGACCAGTCGTGCTACGAACAGAACAG
CGGCAGTCATTCTTGGAGCTATTTCAGTCTCAGCTGAAAGAATCGCAAAT
TCCAGCATGGCTCTGGTGCAATATTCTGAATCAGAATCCGAAGTAGAGAA
CGAGCTTCCTCAGCGCCCAACAAAAAGGCCCCGTCAGGCCGCCAACAATC
CATCTTCCTCACTCCCACCTTTACCTGCCGCTTTTCACGATCTCTATGCC
TCCAGCACTCGCGTCAGCGTGACCGACGACCCCAGTCTCCACGGAGGCCG
AAAAAGGGTCATTCCCCATGTTGAAGGGAACTGGCCGACCCACATCTACT
TGGAGTGTTCAACGTCACGACAAATAGCCTCGACTGTGTCTCGAATTACG
AGAAGACGCGGTGGTTTTATGTCTTACGTGCTGAAAAGCCAGAGGGAAAT
GCTTTGAACCGTCTTCTTCGGCTGTCTAATCGAGCCCTGGCTCGGTTCGA
ACAGCCTCCGCTATACGAGTCGTCACAGGATGTGGCGGCTGTGCGGAAGT
CAAATGGTGGTGGTACGACACTGCCACGGGAATCGAGCGATTCTGGCCAA
ACCGGAGCTGACTACTCTCACTGCTTTCATATCTCGTTGGCGTGGAGCTT
GACAGGTCTGTCGTCTGCAGAGAGTGAGCTGATCGGAGGTGTGGATTTGC
AGAAGGTACGTGAGTTGAGTGTGCGGTTTGATTGTGTCAAGGTGAAAGTT
GGAAACCATGTTTCTAGTATACCGCTGCAGTAGGGTATCCATCCAAAGAT
GAGCTTTCTATTCTTAGCGATGTCATAGATCAGATCAATGATAGGCTCGA
TGGGAGCACGATTCAGCTCCACAGCCTACTACATAGTGATCTTGGCGCAC
AACTGCCCCTCCACATTAGTCTGTCTAGACCAGTCGTGCTACGAACAGAA
CAGCGGCAGTCATTCTTGGAGCTATTTCAGTCTCAGCTGAAAGAATCGCA
AATTCCAGCATGGCTCTGGTGCAATATTCTGAATCAGAATCCGAAGTAGA
GAACGAGCTTCCTCAGCGCCCAACAAAAAGGCCCCGTCAGGCCGCCAACA
ATCCATCTTCCTCACTCCCACCTTTACCTGCCGCTTTTCACGATCTCTAT
GCCTCCAGCACTCGCGTCAGCGTGACCGACGACCCCAGTCTCCACGGAGG
CCGAAAAAGGGTCATTCCCCATGTTGAAGGGAACTGGCCGACCCACATCT
ACTTGGAGT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004518 | nuclease activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0034477 | U6 snRNA 3'-end processing |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR027521 |
| DBxref | PFAM:PF09749 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000010.1 | supercontig | NKJJ01000010.1:424645..425717 - |
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