CAN33_12860-T1, CAN33_12860-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview


Name	CAN33_12860-T1
Unique Name	CAN33_12860-T1
Type	mRNA
Organism	Aspergillus niger FDAARGOS_311

Sequences

The following sequences are available for this feature:

mRNA from alignment at NKJJ01000010.1:432751..434248+
coding sequence from alignment at NKJJ01000010.1:432751..434248+

mRNA from alignment at NKJJ01000010.1:432751..434248+

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>CAN33_12860-T1 ID=CAN33_12860-T1|Name=CAN33_12860-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1498bp|location=Sequence derived from alignment at NKJJ01000010.1:432751..434248+ (Aspergillus niger FDAARGOS_311)
ATGGCGTCCGTTTCGCCACCCAAACCGTGGGAGAGGGCAGGCGCTGCTGC
TGGTATGTCCACAGCTCTCTTGGAAAATGATGAATTAGTAAAACAATATA
TATCTTCATATTACGGTGTGACTGACACATCACTCACTTAAAGGGTCTCC
TGCTTTGGCAACATCATCGGCGGCTACTCCGACCGCCTCATCCGCGATGA
CGGCCAGTTCGACTACTCCGACCGCGGCCGCCAGTGCCTCGGCCCCCACA
GCTACAGCATCTTCAACATCTACTGCTCCCGATCTCCCGTCCCGTCCTAA
TTCACTGAATTCTGTTGTCAATCGCACCGCCTCCAATTACTCTCCCTACT
CGGCCTCCCGGTTCGGCGCAAGCCCTTACGGCGGCTACGGAAGCTACTCG
TCGCCGTACTCCCGCTTCGGCACGATGGGCTCCATGTACGGAGGCTATGG
CGGCATGGGAGGATATGGCGGCATGTATGGTGGCATGGGAGGCATGGGGG
GATGTACGGCGGCATGCCCGGTGATCCCAACGATCCCAACAGCCTGACGA
ATTCCTTCAGCCAGAGCACCCAAGCTACGTTCCAGATGATTGAGAGTATC
GTGGGTGCGTTTGGAGGATTCGCTCAGATGCTGGAGAGCACATACATGGC
GACGCACAGCTCCTTCTTTGGTACGTTAACATCTTTTCCTCGGCGCGTTG
TTGCCTGTTCACTAATAGTTGTCCCTAGCCATGGTCTCTGTGGCAGAGCA
GTTCGGCAACCTCCGAAACACGCTTGGCTCCGCCCTCGGTATCTTCACCA
TCATCCGCTGGTTCAAGACTCTGATCGCGAAGATCACCGGTCGTCCCCCG
CCGGCTGATGCTACCGCCCTCACTCCGTCTGCCTTTGCAGCATTCCTCAG
CGGCCGCTCCTCCCCCGCCACCCTGCCGGATGGCACTCCCGCTCCCCCCA
AGCCCTCCAAGAAGCCGTTCTTCATGTTCCTGATCGCCGTATTCGGTCTT
CCCTACCTGATGGGCAAGCTGATCAAGGCTCTGGCTCGGTCGCAAGAGGA
ACGTCGCCAGCTGATGCTGGGTCCAAATGGCGAGCCCGTGCAGGGCCAAG
GCGCACCGCTTGACCCTTCCAAGCTTGACTTTTGCCGCGTGCTCTACGAC
TACACCCCTGAAGCCCAGGAGAGCTCCGGCATCGATCTGGCCGTGAAGAA
GGGCGACATCGTCGCTGTCCTCAGCAAATCCGATCCGATGGGTAATGCCT
CGGAGTGGTGGCGTTGCCGTGCTCGTGATGGCCGCGTTGGATACTTGCCG
GGACCGTACCTGGAGACTATCCAGCGCCGCCCACAACAGCAAGCGATCAC
CTCGGGCAGCGAAGCCGGCAGTCGCAGCAACTCGATGCAGGCGAGCGCAT
CCGAGGAGATCGCCACGGAAGCCAAGAAGCCCCAGCTGAAGGGCAAGATG
GGTGATATTTCGCCTGAAAGCTTCCAGAAGAGCGCGTTCTACTCATGA

Coding sequence (CDS) from alignment at NKJJ01000010.1:432751..434248+

>CAN33_12860-T1 ID=CAN33_12860-T1|Name=CAN33_12860-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5052bp|location=Sequence derived from alignment at NKJJ01000010.1:432751..434248+ (Aspergillus niger FDAARGOS_311)
ATGGCGTCCGTTTCGCCACCCAAACCGTGGGAGAGGGCAGGCGCTGCTGC
TGGGTCTCCTGCTTTGGCAACATCATCGGCGGCTACTCCGACCGCCTCAT
CCGCGATGACGGCCAGTTCGACTACTCCGACCGCGGCCGCCAGTGCCTCG
GCCCCCACAGCTACAGCATCTTCAACATCTACTGCTCCCGATCTCCCGTC
CCGTCCTAATTCACTGAATTCTGTTGTCAATCGCACCGCCTCCAATTACT
CTCCCTACTCGGCCTCCCGGTTCGGCGCAAGCCCTTACGGCGGCTACGGA
AGCTACTCGTCGCCGTACTCCCGCTTCGGCACGATGGGCTCCATGTACGG
AGGCTATGGCGGCATGGGAGGATATGGCGGCATCCAGAGCACCCAAGCTA
CGTTCCAGATGATTGAGAGTATCGTGGGTGCGTTTGGAGGATTCGCTCAG
ATGCTGGAGAGCACATACATGGCGACGCACAGCTCCTTCTTTGCCATGGT
CTCTGTGGCAGAGCAGTTCGGCAACCTCCGAAACACGCTTGGCTCCGCCC
TCGGTATCTTCACCATCATCCGCTGGTTCAAGACTCTGATCGCGAAGATC
ACCGGTCGTCCCCCGCCGGCTGATGCTACCGCCCTCACTCCGTCTGCCTT
TGCAGCATTCCTCAGCGGCCGCTCCTCCCCCGCCACCCTGCCGGATGGCA
CTCCCGCTCCCCCCAAGCCCTCCAAGAAGCCGTTCTTCATGTTCCTGATC
GCCGTATTCGGTCTTCCCTACCTGATGGGCAAGCTGATCAAGGCTCTGGC
TCGGTCGCAAGAGGAACGTCGCCAGCTGATGCTGGGTCCAAATGGCGAGC
CCGTGCAGGGCCAAGGCGCACCGCTTGACCCTTCCAAGCTTGACTTTTGC
CGCGTGCTCTACGACTACACCCCTGAAGCCCAGGAGAGCTCCGGCATCGA
TCTGGCCGTGAAGAAGGGCGACATCGTCGCTGTCCTCAGCAAATCCGATC
CGATGGGTAATGCCTCGGAGTGGTGGCGTTGCCGTGCTCGTGATGGCCGC
GTTGGATACTTGCCGGGACCGTACCTGGAGACTATCCAGCGCCGCCCACA
ACAGCAAGCGATCACCTCGGGCAGCGAAGCCGGCAGTCGCAGCAACTCGA
TGCAGGCGAGCGCATCCGAGGAGATCGCCACGGAAGCCAAGAAGCCCCAG
CTGAAGGGCAAGATGGGTGATATTTCGCCTGAAAGCTTCCAGAAGAGCGC
GTTCTACTCATGAATGGCGTCCGTTTCGCCACCCAAACCGTGGGAGAGGG
CAGGCGCTGCTGCTGGGTCTCCTGCTTTGGCAACATCATCGGCGGCTACT
CCGACCGCCTCATCCGCGATGACGGCCAGTTCGACTACTCCGACCGCGGC
CGCCAGTGCCTCGGCCCCCACAGCTACAGCATCTTCAACATCTACTGCTC
CCGATCTCCCGTCCCGTCCTAATTCACTGAATTCTGTTGTCAATCGCACC
GCCTCCAATTACTCTCCCTACTCGGCCTCCCGGTTCGGCGCAAGCCCTTA
CGGCGGCTACGGAAGCTACTCGTCGCCGTACTCCCGCTTCGGCACGATGG
GCTCCATGTACGGAGGCTATGGCGGCATGGGAGGATATGGCGGCATCCAG
AGCACCCAAGCTACGTTCCAGATGATTGAGAGTATCGTGGGTGCGTTTGG
AGGATTCGCTCAGATGCTGGAGAGCACATACATGGCGACGCACAGCTCCT
TCTTTGCCATGGTCTCTGTGGCAGAGCAGTTCGGCAACCTCCGAAACACG
CTTGGCTCCGCCCTCGGTATCTTCACCATCATCCGCTGGTTCAAGACTCT
GATCGCGAAGATCACCGGTCGTCCCCCGCCGGCTGATGCTACCGCCCTCA
CTCCGTCTGCCTTTGCAGCATTCCTCAGCGGCCGCTCCTCCCCCGCCACC
CTGCCGGATGGCACTCCCGCTCCCCCCAAGCCCTCCAAGAAGCCGTTCTT
CATGTTCCTGATCGCCGTATTCGGTCTTCCCTACCTGATGGGCAAGCTGA
TCAAGGCTCTGGCTCGGTCGCAAGAGGAACGTCGCCAGCTGATGCTGGGT
CCAAATGGCGAGCCCGTGCAGGGCCAAGGCGCACCGCTTGACCCTTCCAA
GCTTGACTTTTGCCGCGTGCTCTACGACTACACCCCTGAAGCCCAGGAGA
GCTCCGGCATCGATCTGGCCGTGAAGAAGGGCGACATCGTCGCTGTCCTC
AGCAAATCCGATCCGATGGGTAATGCCTCGGAGTGGTGGCGTTGCCGTGC
TCGTGATGGCCGCGTTGGATACTTGCCGGGACCGTACCTGGAGACTATCC
AGCGCCGCCCACAACAGCAAGCGATCACCTCGGGCAGCGAAGCCGGCAGT
CGCAGCAACTCGATGCAGGCGAGCGCATCCGAGGAGATCGCCACGGAAGC
CAAGAAGCCCCAGCTGAAGGGCAAGATGGGTGATATTTCGCCTGAAAGCT
TCCAGAAGAGCGCGTTCTACTCATGAATGGCGTCCGTTTCGCCACCCAAA
CCGTGGGAGAGGGCAGGCGCTGCTGCTGGGTCTCCTGCTTTGGCAACATC
ATCGGCGGCTACTCCGACCGCCTCATCCGCGATGACGGCCAGTTCGACTA
CTCCGACCGCGGCCGCCAGTGCCTCGGCCCCCACAGCTACAGCATCTTCA
ACATCTACTGCTCCCGATCTCCCGTCCCGTCCTAATTCACTGAATTCTGT
TGTCAATCGCACCGCCTCCAATTACTCTCCCTACTCGGCCTCCCGGTTCG
GCGCAAGCCCTTACGGCGGCTACGGAAGCTACTCGTCGCCGTACTCCCGC
TTCGGCACGATGGGCTCCATGTACGGAGGCTATGGCGGCATGGGAGGATA
TGGCGGCATCCAGAGCACCCAAGCTACGTTCCAGATGATTGAGAGTATCG
TGGGTGCGTTTGGAGGATTCGCTCAGATGCTGGAGAGCACATACATGGCG
ACGCACAGCTCCTTCTTTGCCATGGTCTCTGTGGCAGAGCAGTTCGGCAA
CCTCCGAAACACGCTTGGCTCCGCCCTCGGTATCTTCACCATCATCCGCT
GGTTCAAGACTCTGATCGCGAAGATCACCGGTCGTCCCCCGCCGGCTGAT
GCTACCGCCCTCACTCCGTCTGCCTTTGCAGCATTCCTCAGCGGCCGCTC
CTCCCCCGCCACCCTGCCGGATGGCACTCCCGCTCCCCCCAAGCCCTCCA
AGAAGCCGTTCTTCATGTTCCTGATCGCCGTATTCGGTCTTCCCTACCTG
ATGGGCAAGCTGATCAAGGCTCTGGCTCGGTCGCAAGAGGAACGTCGCCA
GCTGATGCTGGGTCCAAATGGCGAGCCCGTGCAGGGCCAAGGCGCACCGC
TTGACCCTTCCAAGCTTGACTTTTGCCGCGTGCTCTACGACTACACCCCT
GAAGCCCAGGAGAGCTCCGGCATCGATCTGGCCGTGAAGAAGGGCGACAT
CGTCGCTGTCCTCAGCAAATCCGATCCGATGGGTAATGCCTCGGAGTGGT
GGCGTTGCCGTGCTCGTGATGGCCGCGTTGGATACTTGCCGGGACCGTAC
CTGGAGACTATCCAGCGCCGCCCACAACAGCAAGCGATCACCTCGGGCAG
CGAAGCCGGCAGTCGCAGCAACTCGATGCAGGCGAGCGCATCCGAGGAGA
TCGCCACGGAAGCCAAGAAGCCCCAGCTGAAGGGCAAGATGGGTGATATT
TCGCCTGAAAGCTTCCAGAAGAGCGCGTTCTACTCATGAATGGCGTCCGT
TTCGCCACCCAAACCGTGGGAGAGGGCAGGCGCTGCTGCTGGGTCTCCTG
CTTTGGCAACATCATCGGCGGCTACTCCGACCGCCTCATCCGCGATGACG
GCCAGTTCGACTACTCCGACCGCGGCCGCCAGTGCCTCGGCCCCCACAGC
TACAGCATCTTCAACATCTACTGCTCCCGATCTCCCGTCCCGTCCTAATT
CACTGAATTCTGTTGTCAATCGCACCGCCTCCAATTACTCTCCCTACTCG
GCCTCCCGGTTCGGCGCAAGCCCTTACGGCGGCTACGGAAGCTACTCGTC
GCCGTACTCCCGCTTCGGCACGATGGGCTCCATGTACGGAGGCTATGGCG
GCATGGGAGGATATGGCGGCATCCAGAGCACCCAAGCTACGTTCCAGATG
ATTGAGAGTATCGTGGGTGCGTTTGGAGGATTCGCTCAGATGCTGGAGAG
CACATACATGGCGACGCACAGCTCCTTCTTTGCCATGGTCTCTGTGGCAG
AGCAGTTCGGCAACCTCCGAAACACGCTTGGCTCCGCCCTCGGTATCTTC
ACCATCATCCGCTGGTTCAAGACTCTGATCGCGAAGATCACCGGTCGTCC
CCCGCCGGCTGATGCTACCGCCCTCACTCCGTCTGCCTTTGCAGCATTCC
TCAGCGGCCGCTCCTCCCCCGCCACCCTGCCGGATGGCACTCCCGCTCCC
CCCAAGCCCTCCAAGAAGCCGTTCTTCATGTTCCTGATCGCCGTATTCGG
TCTTCCCTACCTGATGGGCAAGCTGATCAAGGCTCTGGCTCGGTCGCAAG
AGGAACGTCGCCAGCTGATGCTGGGTCCAAATGGCGAGCCCGTGCAGGGC
CAAGGCGCACCGCTTGACCCTTCCAAGCTTGACTTTTGCCGCGTGCTCTA
CGACTACACCCCTGAAGCCCAGGAGAGCTCCGGCATCGATCTGGCCGTGA
AGAAGGGCGACATCGTCGCTGTCCTCAGCAAATCCGATCCGATGGGTAAT
GCCTCGGAGTGGTGGCGTTGCCGTGCTCGTGATGGCCGCGTTGGATACTT
GCCGGGACCGTACCTGGAGACTATCCAGCGCCGCCCACAACAGCAAGCGA
TCACCTCGGGCAGCGAAGCCGGCAGTCGCAGCAACTCGATGCAGGCGAGC
GCATCCGAGGAGATCGCCACGGAAGCCAAGAAGCCCCAGCTGAAGGGCAA
GATGGGTGATATTTCGCCTGAAAGCTTCCAGAAGAGCGCGTTCTACTCAT
GA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005777	peroxisome
GO:0016021	integral component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0016560	protein import into peroxisome matrix, docking

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
CAN33_12860	CAN33_12860	Aspergillus niger FDAARGOS_311	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CAN33_12860-T1.exon1	CAN33_12860-T1.exon1	Aspergillus niger FDAARGOS_311	exon
CAN33_12860-T1.exon2	CAN33_12860-T1.exon2	Aspergillus niger FDAARGOS_311	exon
CAN33_12860-T1.exon3	CAN33_12860-T1.exon3	Aspergillus niger FDAARGOS_311	exon
CAN33_12860-T1.exon4	CAN33_12860-T1.exon4	Aspergillus niger FDAARGOS_311	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CAN33_12860-T1.cds	CAN33_12860-T1.cds	Aspergillus niger FDAARGOS_311	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
CAN33_12860-T1	CAN33_12860-T1-protein	Aspergillus niger FDAARGOS_311	polypeptide

Properties


Property Name	Value
DBxref	InterPro:IPR036028
DBxref	InterPro:IPR007223
DBxref	InterPro:IPR001452
DBxref	PFAM:PF07653
DBxref	PFAM:PF00018
DBxref	PFAM:PF04088
Product	Peroxin 13 N-terminal region family protein

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Aspergillus niger FDAARGOS_311 whole genome analysis	2021-11-01

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NKJJ01000010.1	supercontig	NKJJ01000010.1:432751..434248 +

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CAN33_12860-T1, CAN33_12860-T1 (mRNA) Aspergillus niger FDAARGOS_311