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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000010.1:457162..457790- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_12895-T1 ID=CAN33_12895-T1|Name=CAN33_12895-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=629bp|location=Sequence derived from alignment at NKJJ01000010.1:457162..457790- (Aspergillus niger FDAARGOS_311)
ATGGACATCTCCCGCTCCATCTTCCCACTCAACCATCCCCGCCAACGCCT
CGACGCAGGCACCTACGCCACGATGGGCGTGGGATGGGGTACATCGTCGC
AGCGCATGAAGCATACAACGCTATCCCTTCACCCTCATCCACCAAACAAA
AGAAAATAGTAGCCTTCGAAGGCGACAGCGCCTTCGGCTTCAGCGCCATG
GAAATCGAAACCCTAGCGCGGTACCGCATCCCCGCGCTTATCTACGTGGT
CAATAACTCGGGCATATATCATGGGGATTCGGTGAGTGAGGATGATTGGA
GGGTGTTGCAGGGTCAGACGGTGGGGAATGATACGAAATCCGAGTCTGGG
TCTGAGAAGGGAAGTGGTGGAGGGACGAAGGGGTTACGCTCAACGAGTCT
CCTCTATGAAACTAGATATGAGATGTTGGCGACGATGTGTGGCGGGAAGG
GATTCTTCGTTAGGACGGAGGAGGAGTTGGAGAGGGCGACGAGGGAAGGG
TTCGAGAGTGAGTGCGTTACGGTTGTCAATGTTATTGTGGAGCCCGGGAT
TGGGAAGGAGATTGGGTTTGCGTGGCAGGGCAAGGGCAAGGGGGATTCTT
CTACTGGTGAAAGAGAGGTGAAGTTGTAG back to topCoding sequence (CDS) from alignment at NKJJ01000010.1:457162..457790- >CAN33_12895-T1 ID=CAN33_12895-T1|Name=CAN33_12895-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1116bp|location=Sequence derived from alignment at NKJJ01000010.1:457162..457790- (Aspergillus niger FDAARGOS_311)
TAGCCTTCGAAGGCGACAGCGCCTTCGGCTTCAGCGCCATGGAAATCGAA
ACCCTAGCGCGGTACCGCATCCCCGCGCTTATCTACGTGGTCAATAACTC
GGGCATATATCATGGGGATTCGGTGAGTGAGGATGATTGGAGGGTGTTGC
AGGGTCAGACGGTGGGGAATGATACGAAATCCGAGTCTGGGTCTGAGAAG
GGAAGTGGTGGAGGGACGAAGGGGTTACGCTCAACGAGTCTCCTCTATGA
AACTAGATATGAGATGTTGGCGACGATGTGTGGCGGGAAGGGATTCTTCG
TTAGGACGGAGGAGGAGTTGGAGAGGGCGACGAGGGAAGGGTTCGAGAGT
GAGTGCGTTACGGTTGTCAATGTTATTGTGGAGCCCGGGATTGGGAAGGA
GATTGGGTTTGCGTGGCAGGGCAAGGGCAAGGGGGATTCTTCTACTGGTG
AAAGAGAGGTGAAGTTGTAGATGGACATCTCCCGCTCCATCTTCCCACTC
AACCATCCCCGCCAACGCCTCGACGCAGGCACCTACGCCACGATGGGCGT
GGGATGGGTAGCCTTCGAAGGCGACAGCGCCTTCGGCTTCAGCGCCATGG
AAATCGAAACCCTAGCGCGGTACCGCATCCCCGCGCTTATCTACGTGGTC
AATAACTCGGGCATATATCATGGGGATTCGGTGAGTGAGGATGATTGGAG
GGTGTTGCAGGGTCAGACGGTGGGGAATGATACGAAATCCGAGTCTGGGT
CTGAGAAGGGAAGTGGTGGAGGGACGAAGGGGTTACGCTCAACGAGTCTC
CTCTATGAAACTAGATATGAGATGTTGGCGACGATGTGTGGCGGGAAGGG
ATTCTTCGTTAGGACGGAGGAGGAGTTGGAGAGGGCGACGAGGGAAGGGT
TCGAGAGTGAGTGCGTTACGGTTGTCAATGTTATTGTGGAGCCCGGGATT
GGGAAGGAGATTGGGTTTGCGTGGCAGGGCAAGGGCAAGGGGGATTCTTC
TACTGGTGAAAGAGAGGTGAAGTTGTAGATGGACATCTCCCGCTCCATCT
TCCCACTCAACCATCCCCGCCAACGCCTCGACGCAGGCACCTACGCCACG
ATGGGCGTGGGATGGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
| GO:0030976 | thiamine pyrophosphate binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029061 |
| DBxref | InterPro:IPR011766 |
| DBxref | PFAM:PF02775 |
| Product | Thiamine pyrophosphate enzyme C-terminal TPP binding domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000010.1 | supercontig | NKJJ01000010.1:457162..457790 - |
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