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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000010.1:459530..461571- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_12905-T1 ID=CAN33_12905-T1|Name=CAN33_12905-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2042bp|location=Sequence derived from alignment at NKJJ01000010.1:459530..461571- (Aspergillus niger FDAARGOS_311)
ATGTCCTTCCTTGGTGGCGCCGAGTGCTCGACGGCGGGCAATCCGTTGAC
TCAGTTCACCAAGCACGTCCAAGATGATAAGTCCCTACAGAGAGATCGCC
TCGTGGGGCGAGGCCCAGGAGGCATGCAAGAAGGCATGCGGTCCCGGGGT
ATGATGGGAGGACAAGATCAGGTACGAAGTGAACCCTTAACTATCAGAAA
TCATACATTCTCATCCAGTACTAATGCCCGATTGGTAATCCTATCCAGAT
GATGGACGAATTCGCCCAACAACCCGGCCAGATCCCCGGTGCTCCCCCGC
AACCGTTCGCTATGGAACAGCTGCGACGCGAGCTAGATCAGTTCCAAACC
ACACCTCCGAGGACGGGCTCCCCCGGCTGGGCGGCCGAGTTCGATGCGGG
CGAGCATGCCCGGATGGAGGCTGCGTTTGCCGGGCCCCAGGGCCCCATGA
TGAATAATGCGTCGGGATTTACGCCCGCGGAGTTTGCCCGGTTCCAGCAG
CAGAGTCGGGCTGGCATGCCTCAGACGGCTAACCATGTGGCGTCTGCCCC
GTCGCCGATGATGGCTGGGTACCAGCGGCCCATGGGTATGGGAGGGTATA
TGGGCATGGGTGGAATGGGGATGATGCCGCAGACATTTAACCCGATGGCG
ATGCAGCAGCAGCCGGCAGAGGCGACTACGCAGGACAAGGGCAAGGGACG
CATGGTGGAGCTGGACGACGAGAACTGGGAGGCACAGTTTGCCGAGATGG
AGACGGCGGATACCCAGAAATTGGACGATGAGGCCAACGCAGCTGTGGAG
GCAGAGCTGAATGATCTGGATAGGTCAGTCCCCCAAGATTCGGGCGATAG
TGCCTTTGAAAGCGTGTGGCAACGGGTCCAAGCTGAGACCGCAACAAACA
GGAAACTGGCCGAGGGCGAGACCGACTTTAACATTGACGACAATCTGCAT
ATGGGTGAGATGGGCGAATGGGACGGATTCGATACGCTTAACACGCGCTT
CCGGAACCCTCAACTAGGCGATTATATGTTCGAAGAAGATAACGTGTTCC
GGAGCGTGAGCAATCCTTTCGAAGAGGGAGTGAAGATCATGCGCGAGGGT
GGAAACCTCTCCCTGGCTGCCTTGGCTTTCGAGGCGGCAGTCCAGAAAGA
TCCTCAACATGTCCAGGCCTGGACCATGCTGGGATCGGCTCAGGCGCAGA
ACGAGAAGGAGCTTCCCGCCATCAGAGCGCTGGAGCAGGCACTTAAGATT
GATGCTAACAATCTGGATGCGCTGATGGGACTGGCTGTTTCCTACACCAA
CGAGGGCTATGACTCGACATCGTACCGCACTTTGGAGCGTTGGCTGTCAG
TCAAGTACCCCCAGATTATCAACCCTAATGATGTTTCATCGGAAGCCGAC
TTGGGCTTTACGGACCGCCAGCTCCTGCACGACCGTGTCACCGATCTCTT
CATCCAGGCTGCTCAGCTGTCGCCATCTGGCGAGCAAATGGACCCGGACG
TCCAGGTCGGTCTTGGCGTTCTCTTCTACTGCGCAGAGGAGTATGACAAG
GCGGTCGATTGCTTCTCTGCTGCGTTGGCGTCCACGGAATCCGGAACGTC
GAACCAACAGGAGCAGCTCCACCTGCTGTGGAACCGTCTGGGTGCTACGC
TTGCCAACTCGGGTCGCTCCGAGGAGGCGATCGAGGCCTACGAGCAGGCG
CTGAACATCAATCCCAACTTCGTCCGGGCACGGTACAACCTGGGTGTGTC
GTGCATCAACATCGGCTGCTACCCAGAAGCCGCGCAACACCTGCTGGGAG
CGCTATCGATGCACCGGGTGGTTGAGCAGGAAGGTCGAGAGCGGGCACGT
GAGATTGTTGGGGGCGAGGGTGGCATTGACGACGAGCAGCTGGATCGCAT
GATTCATGTCAGCCAGAATCAGAGTACCAACCTGTACGACACGTTGCGGC
GAGTATTTAGCCAGATGGGACGACGCGATCTGGCTGATCAGGTGGTGGCG
GGGATGGATGTCAATGTGTTCCGACGGGAGTTTGAGTTCTAA back to topCoding sequence (CDS) from alignment at NKJJ01000010.1:459530..461571- >CAN33_12905-T1 ID=CAN33_12905-T1|Name=CAN33_12905-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3930bp|location=Sequence derived from alignment at NKJJ01000010.1:459530..461571- (Aspergillus niger FDAARGOS_311)
ATGATGGACGAATTCGCCCAACAACCCGGCCAGATCCCCGGTGCTCCCCC
GCAACCGTTCGCTATGGAACAGCTGCGACGCGAGCTAGATCAGTTCCAAA
CCACACCTCCGAGGACGGGCTCCCCCGGCTGGGCGGCCGAGTTCGATGCG
GGCGAGCATGCCCGGATGGAGGCTGCGTTTGCCGGGCCCCAGGGCCCCAT
GATGAATAATGCGTCGGGATTTACGCCCGCGGAGTTTGCCCGGTTCCAGC
AGCAGAGTCGGGCTGGCATGCCTCAGACGGCTAACCATGTGGCGTCTGCC
CCGTCGCCGATGATGGCTGGGTACCAGCGGCCCATGGGTATGGGAGGGTA
TATGGGCATGGGTGGAATGGGGATGATGCCGCAGACATTTAACCCGATGG
CGATGCAGCAGCAGCCGGCAGAGGCGACTACGCAGGACAAGGGCAAGGGA
CGCATGGTGGAGCTGGACGACGAGAACTGGGAGGCACAGTTTGCCGAGAT
GGAGACGGCGGATACCCAGAAATTGGACGATGAGGCCAACGCAGCTGTGG
AGGCAGAGCTGAATGATCTGGATAGGTCAGTCCCCCAAGATTCGGGCGAT
AGTGCCTTTGAAAGCGTGTGGCAACGGGTCCAAGCTGAGACCGCAACAAA
CAGGAAACTGGCCGAGGGCGAGACCGACTTTAACATTGACGACAATCTGC
ATATGGGTGAGATGGGCGAATGGGACGGATTCGATACGCTTAACACGCGC
TTCCGGAACCCTCAACTAGGCGATTATATGTTCGAAGAAGATAACGTGTT
CCGGAGCGTGAGCAATCCTTTCGAAGAGGGAGTGAAGATCATGCGCGAGG
GTGGAAACCTCTCCCTGGCTGCCTTGGCTTTCGAGGCGGCAGTCCAGAAA
GATCCTCAACATGTCCAGGCCTGGACCATGCTGGGATCGGCTCAGGCGCA
GAACGAGAAGGAGCTTCCCGCCATCAGAGCGCTGGAGCAGGCACTTAAGA
TTGATGCTAACAATCTGGATGCGCTGATGGGACTGGCTGTTTCCTACACC
AACGAGGGCTATGACTCGACATCGTACCGCACTTTGGAGCGTTGGCTGTC
AGTCAAGTACCCCCAGATTATCAACCCTAATGATGTTTCATCGGAAGCCG
ACTTGGGCTTTACGGACCGCCAGCTCCTGCACGACCGTGTCACCGATCTC
TTCATCCAGGCTGCTCAGCTGTCGCCATCTGGCGAGCAAATGGACCCGGA
CGTCCAGGTCGGTCTTGGCGTTCTCTTCTACTGCGCAGAGGAGTATGACA
AGGCGGTCGATTGCTTCTCTGCTGCGTTGGCGTCCACGGAATCCGGAACG
TCGAACCAACAGGAGCAGCTCCACCTGCTGTGGAACCGTCTGGGTGCTAC
GCTTGCCAACTCGGGTCGCTCCGAGGAGGCGATCGAGGCCTACGAGCAGG
CGCTGAACATCAATCCCAACTTCGTCCGGGCACGGTACAACCTGGGTGTG
TCGTGCATCAACATCGGCTGCTACCCAGAAGCCGCGCAACACCTGCTGGG
AGCGCTATCGATGCACCGGGTGGTTGAGCAGGAAGGTCGAGAGCGGGCAC
GTGAGATTGTTGGGGGCGAGGGTGGCATTGACGACGAGCAGCTGGATCGC
ATGATTCATGTCAGCCAGAATCAGAGTACCAACCTGTACGACACGTTGCG
GCGAGTATTTAGCCAGATGGGACGACGCGATCTGGCTGATCAGGTGGTGG
CGGGGATGGATGTCAATGTGTTCCGACGGGAGTTTGAGTTCTAAATGTCC
TTCCTTGGTGGCGCCGAGTGCTCGACGGCGGGCAATCCGTTGACTCAGTT
CACCAAGCACGTCCAAGATGATAAGTCCCTACAGAGAGATCGCCTCGTGG
GGCGAGGCCCAGGAGGCATGCAAGAAGGCATGCGGTCCCGGGGTATGATG
GGAGGACAAGATCAGATGATGGACGAATTCGCCCAACAACCCGGCCAGAT
CCCCGGTGCTCCCCCGCAACCGTTCGCTATGGAACAGCTGCGACGCGAGC
TAGATCAGTTCCAAACCACACCTCCGAGGACGGGCTCCCCCGGCTGGGCG
GCCGAGTTCGATGCGGGCGAGCATGCCCGGATGGAGGCTGCGTTTGCCGG
GCCCCAGGGCCCCATGATGAATAATGCGTCGGGATTTACGCCCGCGGAGT
TTGCCCGGTTCCAGCAGCAGAGTCGGGCTGGCATGCCTCAGACGGCTAAC
CATGTGGCGTCTGCCCCGTCGCCGATGATGGCTGGGTACCAGCGGCCCAT
GGGTATGGGAGGGTATATGGGCATGGGTGGAATGGGGATGATGCCGCAGA
CATTTAACCCGATGGCGATGCAGCAGCAGCCGGCAGAGGCGACTACGCAG
GACAAGGGCAAGGGACGCATGGTGGAGCTGGACGACGAGAACTGGGAGGC
ACAGTTTGCCGAGATGGAGACGGCGGATACCCAGAAATTGGACGATGAGG
CCAACGCAGCTGTGGAGGCAGAGCTGAATGATCTGGATAGGTCAGTCCCC
CAAGATTCGGGCGATAGTGCCTTTGAAAGCGTGTGGCAACGGGTCCAAGC
TGAGACCGCAACAAACAGGAAACTGGCCGAGGGCGAGACCGACTTTAACA
TTGACGACAATCTGCATATGGGTGAGATGGGCGAATGGGACGGATTCGAT
ACGCTTAACACGCGCTTCCGGAACCCTCAACTAGGCGATTATATGTTCGA
AGAAGATAACGTGTTCCGGAGCGTGAGCAATCCTTTCGAAGAGGGAGTGA
AGATCATGCGCGAGGGTGGAAACCTCTCCCTGGCTGCCTTGGCTTTCGAG
GCGGCAGTCCAGAAAGATCCTCAACATGTCCAGGCCTGGACCATGCTGGG
ATCGGCTCAGGCGCAGAACGAGAAGGAGCTTCCCGCCATCAGAGCGCTGG
AGCAGGCACTTAAGATTGATGCTAACAATCTGGATGCGCTGATGGGACTG
GCTGTTTCCTACACCAACGAGGGCTATGACTCGACATCGTACCGCACTTT
GGAGCGTTGGCTGTCAGTCAAGTACCCCCAGATTATCAACCCTAATGATG
TTTCATCGGAAGCCGACTTGGGCTTTACGGACCGCCAGCTCCTGCACGAC
CGTGTCACCGATCTCTTCATCCAGGCTGCTCAGCTGTCGCCATCTGGCGA
GCAAATGGACCCGGACGTCCAGGTCGGTCTTGGCGTTCTCTTCTACTGCG
CAGAGGAGTATGACAAGGCGGTCGATTGCTTCTCTGCTGCGTTGGCGTCC
ACGGAATCCGGAACGTCGAACCAACAGGAGCAGCTCCACCTGCTGTGGAA
CCGTCTGGGTGCTACGCTTGCCAACTCGGGTCGCTCCGAGGAGGCGATCG
AGGCCTACGAGCAGGCGCTGAACATCAATCCCAACTTCGTCCGGGCACGG
TACAACCTGGGTGTGTCGTGCATCAACATCGGCTGCTACCCAGAAGCCGC
GCAACACCTGCTGGGAGCGCTATCGATGCACCGGGTGGTTGAGCAGGAAG
GTCGAGAGCGGGCACGTGAGATTGTTGGGGGCGAGGGTGGCATTGACGAC
GAGCAGCTGGATCGCATGATTCATGTCAGCCAGAATCAGAGTACCAACCT
GTACGACACGTTGCGGCGAGTATTTAGCCAGATGGGACGACGCGATCTGG
CTGATCAGGTGGTGGCGGGGATGGATGTCAATGTGTTCCGACGGGAGTTT
GAGTTCTAAATGTCCTTCCTTGGTGGCGCCGAGTGCTCGACGGCGGGCAA
TCCGTTGACTCAGTTCACCAAGCACGTCCAAGATGATAAGTCCCTACAGA
GAGATCGCCTCGTGGGGCGAGGCCCAGGAGGCATGCAAGAAGGCATGCGG
TCCCGGGGTATGATGGGAGGACAAGATCAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013026 |
| DBxref | InterPro:IPR011990 |
| DBxref | InterPro:IPR019734 |
| DBxref | PFAM:PF13181 |
| DBxref | PFAM:PF13176 |
| DBxref | PFAM:PF07720 |
| DBxref | PFAM:PF07719 |
| DBxref | PFAM:PF13432 |
| DBxref | PFAM:PF13414 |
| DBxref | PFAM:PF00515 |
| Product | TPR repeat family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000010.1 | supercontig | NKJJ01000010.1:459530..461571 - |
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