You are here

Home

CAN33_12990-T1, CAN33_12990-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_12990-T1
Unique NameCAN33_12990-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000010.1:504144..505913-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_12990-T1 ID=CAN33_12990-T1|Name=CAN33_12990-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1770bp|location=Sequence derived from alignment at NKJJ01000010.1:504144..505913- (Aspergillus niger FDAARGOS_311)
ATGCCTGCCCCTACGACTGCAGCAGTCACCTCCAAGAAGAGGAAAAATGT
CAAGTCGAGCGCCGTTCCCTCCTCTAAGCGCCGCGCAGTCGCTGAGACTG
AGAGCCCCAATGCGATTGCCGATATCCAGCAGCTGGAAGACCAAATTTCC
GAGTCGCGAAAATACTACAACAACATTGCGACCCTGATTTCCATGCTCAA
TGTCGATGGCTCGTCGAAACCGAACATGACTGTTGCCGTTGCCCTTTGCC
GGGTTTTCAGTCGTCTGATCGCTGGTGGGAATTTGACGGAGACTAGTCGC
GCTGCAGAGAATGAGAAAATCATTGTAGCTTGGTTGAAAGAACGCTGCCG
GGAATACCAGAAGCTCTTGCTGTCCATCATTCGCGAATCTGACTCCTCAT
CTCAGGTCCGTATATATTCCAACTGGCCATATCCACACGGTACTAACACC
CAGCAGATCAGCGCCTTGACCTTGTGCCTGTGCCTCATCAACGAACGTGC
CACCCACCTCCCCGGCGACAATACTCAGGAATGGACATCGGGCTTATTCA
AGGGAATTTTCGAGGCGGTTGTTGAAGCCAAGAACGGACAAGCAGTGCTC
TCCGAATTCATCGAGAAGACAAAGGAATTCGAAGACGTGCGGTACTACAC
ATTCATGCAGCTTGCGTATGTCCACCTGCACAGAACCAAAAAGGAGCCTT
TACAGCAGTCCAAATCCACTGACACACAAAACAGCGAATACGCAGACACC
GAACAAACATCCGAGACCCTCGACGTCCTAATCTCCATACTCTCAGCATG
CGATTCCGTACCAGGCCCGGAGCACGAATTCGAAAGCTTCTACACCGAAT
CCAGCAAGCAGAACAAAAAGGTCCTCTCCGTGAACTCGCACAAGAAACGA
GCCCAAGACGCCTGGCTCGCCATCCTGCGCAACAACCTCTCCCAATCGCA
GCGTAAAACCCTCCTGCGCATCATGGTCCACAACATCGAGCCGTGGTTCA
ACCGCCCCGAACTCCTCATGGACTTCTTAACAGATTCCTACAACGTCGGA
GGAGCAACCTCTCTCCTTGCCCTCTCGGGTCTCTTCTACCTCATCCAAGA
GAAGAACCTCGACTACCCCCAATTCTACCAAAAGCTCTACTCGCTCCTCG
ACGCCGACCTCCTCCACTCCAAGCACCGCTCCCGCTTCTTCCGCCTCATG
AACACCTTCCTCGCCTCTACCCACTTGCCCGCCGCCCTGATCGCTAGCTT
CCTCAAGCGTCTCTCTCGCCTCTCTCTCAACGCGCCCCCGACTGCCATCG
TGGCCATTGTCCCCTTCATGTACAACCTCCTCAAAGAACACCCTACCTGC
GCCTTCATGATGCACCGCAACATTCGCGACGAAGGGCTCAAGGCTCAGAT
AGAAGCAGAGGGCATGGATGATCCCTTTGATCCTACTGAGCCCGATCCGA
CCCGCACAAACGCCATCGAGAGCAGTTTATGGGAAATCGAGACTCTTCAG
TCTCATTATCATCCTAATGTGGCTGCTATTGCAAACATTATTTCTGAGCA
GTTCACGAAACAATTCTATAATTTGGAGGATTTCTTGGATTACACTTACC
AGGGTATGTTGCAGGGAGAGCTGGGGACTGAGGACAAGCCGTTCAAGAGG
ACGCCGGTGGTGGAGTATCAAATACCCAGGCGGATCTTCACGGATCGGTT
GTTGGAGGAAGATGGTGGCCAGGATTCGGGTCCTGGTAGCTTTGTCCGAG
GATTGTGGGATTTTGCTTGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000010.1:504144..505913-

>CAN33_12990-T1 ID=CAN33_12990-T1|Name=CAN33_12990-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4950bp|location=Sequence derived from alignment at NKJJ01000010.1:504144..505913- (Aspergillus niger FDAARGOS_311)
CGAATACGCAGACACCGAACAAACATCCGAGACCCTCGACGTCCTAATCT
CCATACTCTCAGCATGCGATTCCGTACCAGGCCCGGAGCACGAATTCGAA
AGCTTCTACACCGAATCCAGCAAGCAGAACAAAAAGGTCCTCTCCGTGAA
CTCGCACAAGAAACGAGCCCAAGACGCCTGGCTCGCCATCCTGCGCAACA
ACCTCTCCCAATCGCAGCGTAAAACCCTCCTGCGCATCATGGTCCACAAC
ATCGAGCCGTGGTTCAACCGCCCCGAACTCCTCATGGACTTCTTAACAGA
TTCCTACAACGTCGGAGGAGCAACCTCTCTCCTTGCCCTCTCGGGTCTCT
TCTACCTCATCCAAGAGAAGAACCTCGACTACCCCCAATTCTACCAAAAG
CTCTACTCGCTCCTCGACGCCGACCTCCTCCACTCCAAGCACCGCTCCCG
CTTCTTCCGCCTCATGAACACCTTCCTCGCCTCTACCCACTTGCCCGCCG
CCCTGATCGCTAGCTTCCTCAAGCGTCTCTCTCGCCTCTCTCTCAACGCG
CCCCCGACTGCCATCGTGGCCATTGTCCCCTTCATGTACAACCTCCTCAA
AGAACACCCTACCTGCGCCTTCATGATGCACCGCAACATTCGCGACGAAG
GGCTCAAGGCTCAGATAGAAGCAGAGGGCATGGATGATCCCTTTGATCCT
ACTGAGCCCGATCCGACCCGCACAAACGCCATCGAGAGCAGTTTATGGGA
AATCGAGACTCTTCAGTCTCATTATCATCCTAATGTGGCTGCTATTGCAA
ACATTATTTCTGAGCAGTTCACGAAACAATTCTATAATTTGGAGGATTTC
TTGGATTACACTTACCAGGGTATGTTGCAGGGAGAGCTGGGGACTGAGGA
CAAGCCGTTCAAGAGGACGCCGGTGGTGGAGTATCAAATACCCAGGCGGA
TCTTCACGGATCGGTTGTTGGAGGAAGATGGTGGCCAGGATTCGGGTCCT
GGTAGCTTTGTCCGAGGATTGTGGGATTTTGCTTGAATCAGCGCCTTGAC
CTTGTGCCTGTGCCTCATCAACGAACGTGCCACCCACCTCCCCGGCGACA
ATACTCAGGAATGGACATCGGGCTTATTCAAGGGAATTTTCGAGGCGGTT
GTTGAAGCCAAGAACGGACAAGCAGTGCTCTCCGAATTCATCGAGAAGAC
AAAGGAATTCGAAGACGTGCGGTACTACACATTCATGCAGCTTGCATGCC
TGCCCCTACGACTGCAGCAGTCACCTCCAAGAAGAGGAAAAATGTCAAGT
CGAGCGCCGTTCCCTCCTCTAAGCGCCGCGCAGTCGCTGAGACTGAGAGC
CCCAATGCGATTGCCGATATCCAGCAGCTGGAAGACCAAATTTCCGAGTC
GCGAAAATACTACAACAACATTGCGACCCTGATTTCCATGCTCAATGTCG
ATGGCTCGTCGAAACCGAACATGACTGTTGCCGTTGCCCTTTGCCGGGTT
TTCAGTCGTCTGATCGCTGGTGGGAATTTGACGGAGACTAGTCGCGCTGC
AGAGAATGAGAAAATCATTGTAGCTTGGTTGAAAGAACGCTGCCGGGAAT
ACCAGAAGCTCTTGCTGTCCATCATTCGCGAATCTGACTCCTCATCTCAG
CGAATACGCAGACACCGAACAAACATCCGAGACCCTCGACGTCCTAATCT
CCATACTCTCAGCATGCGATTCCGTACCAGGCCCGGAGCACGAATTCGAA
AGCTTCTACACCGAATCCAGCAAGCAGAACAAAAAGGTCCTCTCCGTGAA
CTCGCACAAGAAACGAGCCCAAGACGCCTGGCTCGCCATCCTGCGCAACA
ACCTCTCCCAATCGCAGCGTAAAACCCTCCTGCGCATCATGGTCCACAAC
ATCGAGCCGTGGTTCAACCGCCCCGAACTCCTCATGGACTTCTTAACAGA
TTCCTACAACGTCGGAGGAGCAACCTCTCTCCTTGCCCTCTCGGGTCTCT
TCTACCTCATCCAAGAGAAGAACCTCGACTACCCCCAATTCTACCAAAAG
CTCTACTCGCTCCTCGACGCCGACCTCCTCCACTCCAAGCACCGCTCCCG
CTTCTTCCGCCTCATGAACACCTTCCTCGCCTCTACCCACTTGCCCGCCG
CCCTGATCGCTAGCTTCCTCAAGCGTCTCTCTCGCCTCTCTCTCAACGCG
CCCCCGACTGCCATCGTGGCCATTGTCCCCTTCATGTACAACCTCCTCAA
AGAACACCCTACCTGCGCCTTCATGATGCACCGCAACATTCGCGACGAAG
GGCTCAAGGCTCAGATAGAAGCAGAGGGCATGGATGATCCCTTTGATCCT
ACTGAGCCCGATCCGACCCGCACAAACGCCATCGAGAGCAGTTTATGGGA
AATCGAGACTCTTCAGTCTCATTATCATCCTAATGTGGCTGCTATTGCAA
ACATTATTTCTGAGCAGTTCACGAAACAATTCTATAATTTGGAGGATTTC
TTGGATTACACTTACCAGGGTATGTTGCAGGGAGAGCTGGGGACTGAGGA
CAAGCCGTTCAAGAGGACGCCGGTGGTGGAGTATCAAATACCCAGGCGGA
TCTTCACGGATCGGTTGTTGGAGGAAGATGGTGGCCAGGATTCGGGTCCT
GGTAGCTTTGTCCGAGGATTGTGGGATTTTGCTTGAATCAGCGCCTTGAC
CTTGTGCCTGTGCCTCATCAACGAACGTGCCACCCACCTCCCCGGCGACA
ATACTCAGGAATGGACATCGGGCTTATTCAAGGGAATTTTCGAGGCGGTT
GTTGAAGCCAAGAACGGACAAGCAGTGCTCTCCGAATTCATCGAGAAGAC
AAAGGAATTCGAAGACGTGCGGTACTACACATTCATGCAGCTTGCATGCC
TGCCCCTACGACTGCAGCAGTCACCTCCAAGAAGAGGAAAAATGTCAAGT
CGAGCGCCGTTCCCTCCTCTAAGCGCCGCGCAGTCGCTGAGACTGAGAGC
CCCAATGCGATTGCCGATATCCAGCAGCTGGAAGACCAAATTTCCGAGTC
GCGAAAATACTACAACAACATTGCGACCCTGATTTCCATGCTCAATGTCG
ATGGCTCGTCGAAACCGAACATGACTGTTGCCGTTGCCCTTTGCCGGGTT
TTCAGTCGTCTGATCGCTGGTGGGAATTTGACGGAGACTAGTCGCGCTGC
AGAGAATGAGAAAATCATTGTAGCTTGGTTGAAAGAACGCTGCCGGGAAT
ACCAGAAGCTCTTGCTGTCCATCATTCGCGAATCTGACTCCTCATCTCAG
CGAATACGCAGACACCGAACAAACATCCGAGACCCTCGACGTCCTAATCT
CCATACTCTCAGCATGCGATTCCGTACCAGGCCCGGAGCACGAATTCGAA
AGCTTCTACACCGAATCCAGCAAGCAGAACAAAAAGGTCCTCTCCGTGAA
CTCGCACAAGAAACGAGCCCAAGACGCCTGGCTCGCCATCCTGCGCAACA
ACCTCTCCCAATCGCAGCGTAAAACCCTCCTGCGCATCATGGTCCACAAC
ATCGAGCCGTGGTTCAACCGCCCCGAACTCCTCATGGACTTCTTAACAGA
TTCCTACAACGTCGGAGGAGCAACCTCTCTCCTTGCCCTCTCGGGTCTCT
TCTACCTCATCCAAGAGAAGAACCTCGACTACCCCCAATTCTACCAAAAG
CTCTACTCGCTCCTCGACGCCGACCTCCTCCACTCCAAGCACCGCTCCCG
CTTCTTCCGCCTCATGAACACCTTCCTCGCCTCTACCCACTTGCCCGCCG
CCCTGATCGCTAGCTTCCTCAAGCGTCTCTCTCGCCTCTCTCTCAACGCG
CCCCCGACTGCCATCGTGGCCATTGTCCCCTTCATGTACAACCTCCTCAA
AGAACACCCTACCTGCGCCTTCATGATGCACCGCAACATTCGCGACGAAG
GGCTCAAGGCTCAGATAGAAGCAGAGGGCATGGATGATCCCTTTGATCCT
ACTGAGCCCGATCCGACCCGCACAAACGCCATCGAGAGCAGTTTATGGGA
AATCGAGACTCTTCAGTCTCATTATCATCCTAATGTGGCTGCTATTGCAA
ACATTATTTCTGAGCAGTTCACGAAACAATTCTATAATTTGGAGGATTTC
TTGGATTACACTTACCAGGGTATGTTGCAGGGAGAGCTGGGGACTGAGGA
CAAGCCGTTCAAGAGGACGCCGGTGGTGGAGTATCAAATACCCAGGCGGA
TCTTCACGGATCGGTTGTTGGAGGAAGATGGTGGCCAGGATTCGGGTCCT
GGTAGCTTTGTCCGAGGATTGTGGGATTTTGCTTGAATCAGCGCCTTGAC
CTTGTGCCTGTGCCTCATCAACGAACGTGCCACCCACCTCCCCGGCGACA
ATACTCAGGAATGGACATCGGGCTTATTCAAGGGAATTTTCGAGGCGGTT
GTTGAAGCCAAGAACGGACAAGCAGTGCTCTCCGAATTCATCGAGAAGAC
AAAGGAATTCGAAGACGTGCGGTACTACACATTCATGCAGCTTGCATGCC
TGCCCCTACGACTGCAGCAGTCACCTCCAAGAAGAGGAAAAATGTCAAGT
CGAGCGCCGTTCCCTCCTCTAAGCGCCGCGCAGTCGCTGAGACTGAGAGC
CCCAATGCGATTGCCGATATCCAGCAGCTGGAAGACCAAATTTCCGAGTC
GCGAAAATACTACAACAACATTGCGACCCTGATTTCCATGCTCAATGTCG
ATGGCTCGTCGAAACCGAACATGACTGTTGCCGTTGCCCTTTGCCGGGTT
TTCAGTCGTCTGATCGCTGGTGGGAATTTGACGGAGACTAGTCGCGCTGC
AGAGAATGAGAAAATCATTGTAGCTTGGTTGAAAGAACGCTGCCGGGAAT
ACCAGAAGCTCTTGCTGTCCATCATTCGCGAATCTGACTCCTCATCTCAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_12990CAN33_12990Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_12990-T1CAN33_12990-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_12990-T1.cdsCAN33_12990-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_12990-T1.exon3CAN33_12990-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_12990-T1.exon2CAN33_12990-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_12990-T1.exon1CAN33_12990-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteBUSCO:EOG09261RWU
DBxrefInterPro:IPR005612
DBxrefPFAM:PF03914
ProductCBF/Mak21 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000010.1supercontigNKJJ01000010.1:504144..505913 -
Powered by Drupal