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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000010.1:506150..507086+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_12995-T1 ID=CAN33_12995-T1|Name=CAN33_12995-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=937bp|location=Sequence derived from alignment at NKJJ01000010.1:506150..507086+ (Aspergillus niger FDAARGOS_311)
ATGGCTTCGCGTTTGGCTAAGAGCGCCCTTGGTATGCCGAACTAGACTCT
TTTCGGCTTGCTTTATCAACTGGCTATGATTGTTAACGCCCCCTAGGTGC
TGCCCGGCTCCGGCCGACCCTTCCCACGCGCAACGTCGCTCCCATCACTG
CCACCTTGACCGCGTCTCGCTCGGTCTCCAACGTTCCCACCGAGGACCCC
AAGAAGAAGGCTCAGTCCATCATCGATGCCCTCCCCGGCAACTCCCTGGT
CTCCAAGACCGCCGTCCTCTCTGCCGCTGCCGGTATCTCCATCGCTGCCA
TCAGCAACGAGCTCTATGTTATGAACGAGGAAACCGTTGCTGCTTTCTGT
CTTCTCAGCGTCTTCACTGCCGTTGCCAAGTACGGTGGTCCTGCTTACCG
TGAGTGGGCTGAGGGTCAGGTTCAGAAGCACAAGGACATCCTGAACGCTG
CCCGTGCCGACCACACCAACGCCGTTAAGCAGCGTATGGAGAACGTCCAG
GAGCTCTCCAGCGTTGTTGAGCTCACTAAGCAGCTGTTCGCTGTTTCCAA
GGTACATTCAGATCCTTTCCATACTCATCCGATCGAAACGTGGTCGGGTT
AGCGGACGCAGGAAGCTAATGGTATATAAAGGAAACCGCTCAGCTTGAGG
CTCAGGCCTACGAGCTTGAGCAGCGCACTGCTCTGGCTACCGAGGCTAAG
CAGGTTCTCGACTCCTGGGTTCGCTACGAGGGCCAGGTTAAGCAGCGCCA
GCAGCGTGAGCTTGCCGAGAGCGTCATCGGCAAGATCCAGAAGGAGCTTG
AGAACCCAAGGTTCTCCAGCAGATCCTTCAGCAGAGCGTTGCTGATGTTG
AGCGTAAGTTGATTTCTTGTGAGCAGCATTTTTTTGATACAATGCTTACG
ACTATTTACAGGTATCATGTCCTCCAAGGCCCAGTAA back to topCoding sequence (CDS) from alignment at NKJJ01000010.1:506150..507086+ >CAN33_12995-T1 ID=CAN33_12995-T1|Name=CAN33_12995-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2952bp|location=Sequence derived from alignment at NKJJ01000010.1:506150..507086+ (Aspergillus niger FDAARGOS_311)
ATGGCTTCGCGTTTGGCTAAGAGCGCCCTTGGTGCTGCCCGGCTCCGGCC
GACCCTTCCCACGCGCAACGTCGCTCCCATCACTGCCACCTTGACCGCGT
CTCGCTCGGTCTCCAACGTTCCCACCGAGGACCCCAAGAAGAAGGCTCAG
TCCATCATCGATGCCCTCCCCGGCAACTCCCTGGTCTCCAAGACCGCCGT
CCTCTCTGCCGCTGCCGGTATCTCCATCGCTGCCATCAGCAACGAGCTCT
ATGTTATGAACGAGGAAACCGTTGCTGCTTTCTGTCTTCTCAGCGTCTTC
ACTGCCGTTGCCAAGTACGGTGGTCCTGCTTACCGTGAGTGGGCTGAGGG
TCAGGTTCAGAAGCACAAGGACATCCTGAACGCTGCCCGTGCCGACCACA
CCAACGCCGTTAAGCAGCGTATGGAGAACGTCCAGGAGCTCTCCAGCGTT
GTTGAGCTCACTAAGCAGCTGTTCGCTGTTTCCAAGGAAACCGCTCAGCT
TGAGGCTCAGGCCTACGAGCTTGAGCAGCGCACTGCTCTGGCTACCGAGG
CTAAGCAGGTTCTCGACTCCTGGGTTCGCTACGAGGGCCAGGTTAAGCAG
CGCCAGCAGCGTGAGCTTGCCGAGAGCGTCATCGGCAAGATCCAGAAGGA
GCTTGAGAACCCAAGGTTCTCCAGCAGATCCTTCAGCAGAGCGTTGCTGA
TGTTGAGCGTAAGTATCATGTCCTCCAAGGCCCAGTAAATGGCTTCGCGT
TTGGCTAAGAGCGCCCTTGGTGCTGCCCGGCTCCGGCCGACCCTTCCCAC
GCGCAACGTCGCTCCCATCACTGCCACCTTGACCGCGTCTCGCTCGGTCT
CCAACGTTCCCACCGAGGACCCCAAGAAGAAGGCTCAGTCCATCATCGAT
GCCCTCCCCGGCAACTCCCTGGTCTCCAAGACCGCCGTCCTCTCTGCCGC
TGCCGGTATCTCCATCGCTGCCATCAGCAACGAGCTCTATGTTATGAACG
AGGAAACCGTTGCTGCTTTCTGTCTTCTCAGCGTCTTCACTGCCGTTGCC
AAGTACGGTGGTCCTGCTTACCGTGAGTGGGCTGAGGGTCAGGTTCAGAA
GCACAAGGACATCCTGAACGCTGCCCGTGCCGACCACACCAACGCCGTTA
AGCAGCGTATGGAGAACGTCCAGGAGCTCTCCAGCGTTGTTGAGCTCACT
AAGCAGCTGTTCGCTGTTTCCAAGGAAACCGCTCAGCTTGAGGCTCAGGC
CTACGAGCTTGAGCAGCGCACTGCTCTGGCTACCGAGGCTAAGCAGGTTC
TCGACTCCTGGGTTCGCTACGAGGGCCAGGTTAAGCAGCGCCAGCAGCGT
GAGCTTGCCGAGAGCGTCATCGGCAAGATCCAGAAGGAGCTTGAGAACCC
AAGGTTCTCCAGCAGATCCTTCAGCAGAGCGTTGCTGATGTTGAGCGTAA
GTATCATGTCCTCCAAGGCCCAGTAAATGGCTTCGCGTTTGGCTAAGAGC
GCCCTTGGTGCTGCCCGGCTCCGGCCGACCCTTCCCACGCGCAACGTCGC
TCCCATCACTGCCACCTTGACCGCGTCTCGCTCGGTCTCCAACGTTCCCA
CCGAGGACCCCAAGAAGAAGGCTCAGTCCATCATCGATGCCCTCCCCGGC
AACTCCCTGGTCTCCAAGACCGCCGTCCTCTCTGCCGCTGCCGGTATCTC
CATCGCTGCCATCAGCAACGAGCTCTATGTTATGAACGAGGAAACCGTTG
CTGCTTTCTGTCTTCTCAGCGTCTTCACTGCCGTTGCCAAGTACGGTGGT
CCTGCTTACCGTGAGTGGGCTGAGGGTCAGGTTCAGAAGCACAAGGACAT
CCTGAACGCTGCCCGTGCCGACCACACCAACGCCGTTAAGCAGCGTATGG
AGAACGTCCAGGAGCTCTCCAGCGTTGTTGAGCTCACTAAGCAGCTGTTC
GCTGTTTCCAAGGAAACCGCTCAGCTTGAGGCTCAGGCCTACGAGCTTGA
GCAGCGCACTGCTCTGGCTACCGAGGCTAAGCAGGTTCTCGACTCCTGGG
TTCGCTACGAGGGCCAGGTTAAGCAGCGCCAGCAGCGTGAGCTTGCCGAG
AGCGTCATCGGCAAGATCCAGAAGGAGCTTGAGAACCCAAGGTTCTCCAG
CAGATCCTTCAGCAGAGCGTTGCTGATGTTGAGCGTAAGTATCATGTCCT
CCAAGGCCCAGTAAATGGCTTCGCGTTTGGCTAAGAGCGCCCTTGGTGCT
GCCCGGCTCCGGCCGACCCTTCCCACGCGCAACGTCGCTCCCATCACTGC
CACCTTGACCGCGTCTCGCTCGGTCTCCAACGTTCCCACCGAGGACCCCA
AGAAGAAGGCTCAGTCCATCATCGATGCCCTCCCCGGCAACTCCCTGGTC
TCCAAGACCGCCGTCCTCTCTGCCGCTGCCGGTATCTCCATCGCTGCCAT
CAGCAACGAGCTCTATGTTATGAACGAGGAAACCGTTGCTGCTTTCTGTC
TTCTCAGCGTCTTCACTGCCGTTGCCAAGTACGGTGGTCCTGCTTACCGT
GAGTGGGCTGAGGGTCAGGTTCAGAAGCACAAGGACATCCTGAACGCTGC
CCGTGCCGACCACACCAACGCCGTTAAGCAGCGTATGGAGAACGTCCAGG
AGCTCTCCAGCGTTGTTGAGCTCACTAAGCAGCTGTTCGCTGTTTCCAAG
GAAACCGCTCAGCTTGAGGCTCAGGCCTACGAGCTTGAGCAGCGCACTGC
TCTGGCTACCGAGGCTAAGCAGGTTCTCGACTCCTGGGTTCGCTACGAGG
GCCAGGTTAAGCAGCGCCAGCAGCGTGAGCTTGCCGAGAGCGTCATCGGC
AAGATCCAGAAGGAGCTTGAGAACCCAAGGTTCTCCAGCAGATCCTTCAG
CAGAGCGTTGCTGATGTTGAGCGTAAGTATCATGTCCTCCAAGGCCCAGT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0000276 | mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0015078 | proton transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0015986 | ATP synthesis coupled proton transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR008688 |
| DBxref | PFAM:PF05405 |
| Product | atp4 subunit B of the stator stalk of mitochondrial F1F0 ATP synthase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000010.1 | supercontig | NKJJ01000010.1:506150..507086 + |
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