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CAN33_13000-T1, CAN33_13000-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_13000-T1
Unique NameCAN33_13000-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000010.1:508102..509391+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_13000-T1 ID=CAN33_13000-T1|Name=CAN33_13000-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1290bp|location=Sequence derived from alignment at NKJJ01000010.1:508102..509391+ (Aspergillus niger FDAARGOS_311)
ATGCCGCTCCGCGAGATACTTCACAAGAAGGACGCCCTCAACAACACGGC
GGACCACTATGCGTCTAACGCCGTTCCCACGACATCCGGGAGGAATGTGC
CTCAGATCACCTTTATCCGAACCGACACAACCTCACAAGAAGTTATCCGT
CCGCCTGTCTTCGACGGAGATGCCGATCACCCCGACGATCGATATTTAGA
ACCCGTTCCTCCCTCTCCTTCGCATCGCATTTCGTTGAATCCGTTCCGTC
GCTCGCGTGCGCCCTCAGAGTCCTCGGGTGCAAACTCACCAACGCGCCCG
CGCGGAGAAAGACGGCTGACGCACCTGCTGCACTTGGATCGCTCGGGGTC
GCGGAACTCCAGCTCGTCATCAGTCAACGTCCCATCCGACCTTCCGCAGA
TCGACTGTGATAGAGGCGATGAGCAAGAAAGGGAGGCACAATGGGAGAAG
AGGGCCACTGTACTGGCGCAGCGCAGCCCGCAGGCCGGAGCTTCGTGCCT
GTCGCCTACTTCACCGACAGGCTTCGGACTGGATGGCGCCCCATCGAGGT
CGCGGAGTTCTAGTCGGAGCCGGATAAACGATCCAGAAGGGGATGTGAGT
GGTCAGATTGCGTGACCTCAATGCATGCATCTAACTGTGGCATAGATCAA
TGTACAGGAGGCGATCCGACTTCATGAAGCTGGAGGTATGGACATAACTT
GGAGATTGGCTGTCCGCTTGCTTAGTTGCTTACACCTGGATTACAGAACT
CGAACGGTCGACAAAGATGTTTGAGCACCTGGCGGATCCTAACGGTGCCA
ACAATGCACTCAGTCAAGTGCTCTATGGGCTAGCACTCCGGTAAGTAGCA
ACCGTACCTTTGTTGAGCTTCGTTTACGCCCGACTCCTATCGTGGGCTGC
ACATTTGGTGGACACTATTGCTACATGATGCTGATTTGGGCTTGATATAG
ACATGGTTGGGGCTGCTCGCCAGATCCTGATAGAGCCGTCATGTATCTCT
CGGCCGCAGCGTCCAACTCGGCATCGATAGAGTCCCAGGCGCTCCAGGCC
GGCATCAAGAAGGGCGGATCTGCCAAGGGAGAGCTAGTGTTGGCTATTTT
TGAGCTGGGAAACTGCTTCCGTAACGGCTGGGGTGTCAAGAAGGACCCAG
TCGCAGCGCGACAATACTTCGAAACGGCAGCCAATCTGGGCGATACCGAT
GCGATGAACGAAGTTGCTTGGTGCTACCTAGAAGGGTTTGGAGGGAAAAA
GGACAAGGTTAGTGTAGTTTGCGTAATGGACCGTTCGTGA
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Coding sequence (CDS) from alignment at NKJJ01000010.1:508102..509391+

>CAN33_13000-T1 ID=CAN33_13000-T1|Name=CAN33_13000-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4272bp|location=Sequence derived from alignment at NKJJ01000010.1:508102..509391+ (Aspergillus niger FDAARGOS_311)
ATGCCGCTCCGCGAGATACTTCACAAGAAGGACGCCCTCAACAACACGGC
GGACCACTATGCGTCTAACGCCGTTCCCACGACATCCGGGAGGAATGTGC
CTCAGATCACCTTTATCCGAACCGACACAACCTCACAAGAAGTTATCCGT
CCGCCTGTCTTCGACGGAGATGCCGATCACCCCGACGATCGATATTTAGA
ACCCGTTCCTCCCTCTCCTTCGCATCGCATTTCGTTGAATCCGTTCCGTC
GCTCGCGTGCGCCCTCAGAGTCCTCGGGTGCAAACTCACCAACGCGCCCG
CGCGGAGAAAGACGGCTGACGCACCTGCTGCACTTGGATCGCTCGGGGTC
GCGGAACTCCAGCTCGTCATCAGTCAACGTCCCATCCGACCTTCCGCAGA
TCGACTGTGATAGAGGCGATGAGCAAGAAAGGGAGGCACAATGGGAGAAG
AGGGCCACTGTACTGGCGCAGCGCAGCCCGCAGGCCGGAGCTTCGTGCCT
GTCGCCTACTTCACCGACAGGCTTCGGACTGGATGGCGCCCCATCGAGGT
CGCGGAGTTCTAGTCGGAGCCGGATAAACGATCCAGAAGGGGATATCAAT
GTACAGGAGGCGATCCGACTTCATGAAGCTGGAGAACTCGAACGGTCGAC
AAAGATGTTTGAGCACCTGGCGGATCCTAACGGTGCCAACAATGCACTCA
GTCAAGTGCTCTATGGGCTAGCACTCCGACATGGTTGGGGCTGCTCGCCA
GATCCTGATAGAGCCGTCATGTATCTCTCGGCCGCAGCGTCCAACTCGGC
ATCGATAGAGTCCCAGGCGCTCCAGGCCGGCATCAAGAAGGGCGGATCTG
CCAAGGGAGAGCTAGTGTTGGCTATTTTTGAGCTGGGAAACTGCTTCCGT
AACGGCTGGGGTGTCAAGAAGGACCCAGTCGCAGCGCGACAATACTTCGA
AACGGCAGCCAATCTGGGCGATACCGATGCGATGAACGAAGTTGCTTGGT
GCTACCTAGAAGGGTTTGGAGGGAAAAAGGACAAGGTTAGTGTAGTTTGC
GTAATGGACCGTTCGTGAATGCCGCTCCGCGAGATACTTCACAAGAAGGA
CGCCCTCAACAACACGGCGGACCACTATGCGTCTAACGCCGTTCCCACGA
CATCCGGGAGGAATGTGCCTCAGATCACCTTTATCCGAACCGACACAACC
TCACAAGAAGTTATCCGTCCGCCTGTCTTCGACGGAGATGCCGATCACCC
CGACGATCGATATTTAGAACCCGTTCCTCCCTCTCCTTCGCATCGCATTT
CGTTGAATCCGTTCCGTCGCTCGCGTGCGCCCTCAGAGTCCTCGGGTGCA
AACTCACCAACGCGCCCGCGCGGAGAAAGACGGCTGACGCACCTGCTGCA
CTTGGATCGCTCGGGGTCGCGGAACTCCAGCTCGTCATCAGTCAACGTCC
CATCCGACCTTCCGCAGATCGACTGTGATAGAGGCGATGAGCAAGAAAGG
GAGGCACAATGGGAGAAGAGGGCCACTGTACTGGCGCAGCGCAGCCCGCA
GGCCGGAGCTTCGTGCCTGTCGCCTACTTCACCGACAGGCTTCGGACTGG
ATGGCGCCCCATCGAGGTCGCGGAGTTCTAGTCGGAGCCGGATAAACGAT
CCAGAAGGGGATATCAATGTACAGGAGGCGATCCGACTTCATGAAGCTGG
AGAACTCGAACGGTCGACAAAGATGTTTGAGCACCTGGCGGATCCTAACG
GTGCCAACAATGCACTCAGTCAAGTGCTCTATGGGCTAGCACTCCGACAT
GGTTGGGGCTGCTCGCCAGATCCTGATAGAGCCGTCATGTATCTCTCGGC
CGCAGCGTCCAACTCGGCATCGATAGAGTCCCAGGCGCTCCAGGCCGGCA
TCAAGAAGGGCGGATCTGCCAAGGGAGAGCTAGTGTTGGCTATTTTTGAG
CTGGGAAACTGCTTCCGTAACGGCTGGGGTGTCAAGAAGGACCCAGTCGC
AGCGCGACAATACTTCGAAACGGCAGCCAATCTGGGCGATACCGATGCGA
TGAACGAAGTTGCTTGGTGCTACCTAGAAGGGTTTGGAGGGAAAAAGGAC
AAGGTTAGTGTAGTTTGCGTAATGGACCGTTCGTGAATGCCGCTCCGCGA
GATACTTCACAAGAAGGACGCCCTCAACAACACGGCGGACCACTATGCGT
CTAACGCCGTTCCCACGACATCCGGGAGGAATGTGCCTCAGATCACCTTT
ATCCGAACCGACACAACCTCACAAGAAGTTATCCGTCCGCCTGTCTTCGA
CGGAGATGCCGATCACCCCGACGATCGATATTTAGAACCCGTTCCTCCCT
CTCCTTCGCATCGCATTTCGTTGAATCCGTTCCGTCGCTCGCGTGCGCCC
TCAGAGTCCTCGGGTGCAAACTCACCAACGCGCCCGCGCGGAGAAAGACG
GCTGACGCACCTGCTGCACTTGGATCGCTCGGGGTCGCGGAACTCCAGCT
CGTCATCAGTCAACGTCCCATCCGACCTTCCGCAGATCGACTGTGATAGA
GGCGATGAGCAAGAAAGGGAGGCACAATGGGAGAAGAGGGCCACTGTACT
GGCGCAGCGCAGCCCGCAGGCCGGAGCTTCGTGCCTGTCGCCTACTTCAC
CGACAGGCTTCGGACTGGATGGCGCCCCATCGAGGTCGCGGAGTTCTAGT
CGGAGCCGGATAAACGATCCAGAAGGGGATATCAATGTACAGGAGGCGAT
CCGACTTCATGAAGCTGGAGAACTCGAACGGTCGACAAAGATGTTTGAGC
ACCTGGCGGATCCTAACGGTGCCAACAATGCACTCAGTCAAGTGCTCTAT
GGGCTAGCACTCCGACATGGTTGGGGCTGCTCGCCAGATCCTGATAGAGC
CGTCATGTATCTCTCGGCCGCAGCGTCCAACTCGGCATCGATAGAGTCCC
AGGCGCTCCAGGCCGGCATCAAGAAGGGCGGATCTGCCAAGGGAGAGCTA
GTGTTGGCTATTTTTGAGCTGGGAAACTGCTTCCGTAACGGCTGGGGTGT
CAAGAAGGACCCAGTCGCAGCGCGACAATACTTCGAAACGGCAGCCAATC
TGGGCGATACCGATGCGATGAACGAAGTTGCTTGGTGCTACCTAGAAGGG
TTTGGAGGGAAAAAGGACAAGGTTAGTGTAGTTTGCGTAATGGACCGTTC
GTGAATGCCGCTCCGCGAGATACTTCACAAGAAGGACGCCCTCAACAACA
CGGCGGACCACTATGCGTCTAACGCCGTTCCCACGACATCCGGGAGGAAT
GTGCCTCAGATCACCTTTATCCGAACCGACACAACCTCACAAGAAGTTAT
CCGTCCGCCTGTCTTCGACGGAGATGCCGATCACCCCGACGATCGATATT
TAGAACCCGTTCCTCCCTCTCCTTCGCATCGCATTTCGTTGAATCCGTTC
CGTCGCTCGCGTGCGCCCTCAGAGTCCTCGGGTGCAAACTCACCAACGCG
CCCGCGCGGAGAAAGACGGCTGACGCACCTGCTGCACTTGGATCGCTCGG
GGTCGCGGAACTCCAGCTCGTCATCAGTCAACGTCCCATCCGACCTTCCG
CAGATCGACTGTGATAGAGGCGATGAGCAAGAAAGGGAGGCACAATGGGA
GAAGAGGGCCACTGTACTGGCGCAGCGCAGCCCGCAGGCCGGAGCTTCGT
GCCTGTCGCCTACTTCACCGACAGGCTTCGGACTGGATGGCGCCCCATCG
AGGTCGCGGAGTTCTAGTCGGAGCCGGATAAACGATCCAGAAGGGGATAT
CAATGTACAGGAGGCGATCCGACTTCATGAAGCTGGAGAACTCGAACGGT
CGACAAAGATGTTTGAGCACCTGGCGGATCCTAACGGTGCCAACAATGCA
CTCAGTCAAGTGCTCTATGGGCTAGCACTCCGACATGGTTGGGGCTGCTC
GCCAGATCCTGATAGAGCCGTCATGTATCTCTCGGCCGCAGCGTCCAACT
CGGCATCGATAGAGTCCCAGGCGCTCCAGGCCGGCATCAAGAAGGGCGGA
TCTGCCAAGGGAGAGCTAGTGTTGGCTATTTTTGAGCTGGGAAACTGCTT
CCGTAACGGCTGGGGTGTCAAGAAGGACCCAGTCGCAGCGCGACAATACT
TCGAAACGGCAGCCAATCTGGGCGATACCGATGCGATGAACGAAGTTGCT
TGGTGCTACCTAGAAGGGTTTGGAGGGAAAAAGGACAAGGTTAGTGTAGT
TTGCGTAATGGACCGTTCGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_13000CAN33_13000Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_13000-T1.exon1CAN33_13000-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_13000-T1.exon2CAN33_13000-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_13000-T1.exon3CAN33_13000-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_13000-T1.exon4CAN33_13000-T1.exon4Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_13000-T1.cdsCAN33_13000-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_13000-T1CAN33_13000-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR011990
DBxrefInterPro:IPR006597
DBxrefPFAM:PF08238
ProductSel1 repeat family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000010.1supercontigNKJJ01000010.1:508102..509391 +
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