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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000010.1:536182..537488+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_13025-T1 ID=CAN33_13025-T1|Name=CAN33_13025-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1307bp|location=Sequence derived from alignment at NKJJ01000010.1:536182..537488+ (Aspergillus niger FDAARGOS_311)
ATGGCTTCCCAAAAAATCACCTCCGCCCTCGCGGAGATCGAATCCTCCGC
GAACCCCCAAAACAAGCTGCAGCTCTACAACAACCTCCTCAGCGACATCG
TATCGACGTCCACAGAACCCCAGATTTCTAGAGACCTAATTTACTTTCTT
GACTCCGTCCTCAGCGAAGACATCAGCATCGTCGCCGCCCGCCCCATCCT
CGACTCCTTCATCGTCGTCCTCCGCAAACTCACCCAAGAAACCCAAATCA
GCGTCGGCCAACACGCCATCACCCTCCTCCAATCCCGATCCACCTCTGTC
GAAGAACAAGACGCGCAGATCCGCGAGCTCCTCGCAGATGCCTACGAAGC
CGAAGGCCAGTACACCGACGCCGCAAAAGCCCTGCAGGGCATCCACATCG
ACAGTTCGCAGCGTCTGGTCTCCGACGCAGCCAAGGTGCGGCTATGGATC
CGGATTGTGAGATACTACCTCGAGGAAGACGATACCACAAGTGCGGAGGC
TTTCTTGAACCGCATCAAGAACCTACCGAGTAAGATCGAGGATCATGAGT
TGAAGCTACATTTCAAGCTATCCCAGGCTCGTATATTGGATGCTCGCCGA
CGCTTTCTCGATGCTAGTCAGGAATACTTCAATGTTAGCCTTGCGGCGGG
AGTGGATGAAGCGGATCGATTGCAGGCCTTGGCGGCTGCTATTCGGTGTG
CGGTGCTCGCTCCGGCCGGGCCGCAGCGGTCTCGGATCCTCGCGACGTTG
TATAAGGATGATCGGTCGACGTCGGTGGATGAGTTTGCTATCCTGGAGAA
AATGTTCCTGGATCGGTTGCTGACTCCAGAGGAGGTGGCTGCGTTCGCGC
AGCGGTTGGCGCCGCATCAGTTGGCTGTGACGGCTGATGGGTCTACGGTG
CTTGATAAGGCTGTTGTTGAACACAATTTGGTTGCGGCCAGCAAGCTTTA
CGAAAATATTACGACTGATGCGTTGGGTGCGATCCTGGGGCTTCAAGGGA
GCGGGGACTTCACGGCGGGGGAGAAGGCGGAAGATTATGCGGCGAGGATG
GTCGAGCAGGGTCGATTGAAGGGGAGTATTGATCAGATTGACGGGATAAT
ATACTTCGATGGAGGAAATGCGACTACAGGACAGCATATCCGGCAGTGGG
ATGCTGGGGTGCAGGGTTTGGCCGAGGACGTGGAGAGAGTGGCTACCAGC
ATTACCAATGCGTTTCCAGTGAGTACTATCATTTCAGTACAATTGTGGTC
TACAGTGAGCTAACATAAGAGTAGGAATTCGCAGCTGGACAGCCAGCAGT
GCATTGA back to topCoding sequence (CDS) from alignment at NKJJ01000010.1:536182..537488+ >CAN33_13025-T1 ID=CAN33_13025-T1|Name=CAN33_13025-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2502bp|location=Sequence derived from alignment at NKJJ01000010.1:536182..537488+ (Aspergillus niger FDAARGOS_311)
ATGGCTTCCCAAAAAATCACCTCCGCCCTCGCGGAGATCGAATCCTCCGC
GAACCCCCAAAACAAGCTGCAGCTCTACAACAACCTCCTCAGCGACATCG
TATCGACGTCCACAGAACCCCAGATTTCTAGAGACCTAATTTACTTTCTT
GACTCCGTCCTCAGCGAAGACATCAGCATCGTCGCCGCCCGCCCCATCCT
CGACTCCTTCATCGTCGTCCTCCGCAAACTCACCCAAGAAACCCAAATCA
GCGTCGGCCAACACGCCATCACCCTCCTCCAATCCCGATCCACCTCTGTC
GAAGAACAAGACGCGCAGATCCGCGAGCTCCTCGCAGATGCCTACGAAGC
CGAAGGCCAGTACACCGACGCCGCAAAAGCCCTGCAGGGCATCCACATCG
ACAGTTCGCAGCGTCTGGTCTCCGACGCAGCCAAGGTGCGGCTATGGATC
CGGATTGTGAGATACTACCTCGAGGAAGACGATACCACAAGTGCGGAGGC
TTTCTTGAACCGCATCAAGAACCTACCGAGTAAGATCGAGGATCATGAGT
TGAAGCTACATTTCAAGCTATCCCAGGCTCGTATATTGGATGCTCGCCGA
CGCTTTCTCGATGCTAGTCAGGAATACTTCAATGTTAGCCTTGCGGCGGG
AGTGGATGAAGCGGATCGATTGCAGGCCTTGGCGGCTGCTATTCGGTGTG
CGGTGCTCGCTCCGGCCGGGCCGCAGCGGTCTCGGATCCTCGCGACGTTG
TATAAGGATGATCGGTCGACGTCGGTGGATGAGTTTGCTATCCTGGAGAA
AATGTTCCTGGATCGGTTGCTGACTCCAGAGGAGGTGGCTGCGTTCGCGC
AGCGGTTGGCGCCGCATCAGTTGGCTGTGACGGCTGATGGGTCTACGGTG
CTTGATAAGGCTGTTGTTGAACACAATTTGGTTGCGGCCAGCAAGCTTTA
CGAAAATATTACGACTGATGCGTTGGGTGCGATCCTGGGGCTTCAAGGGA
GCGGGGACTTCACGGCGGGGGAGAAGGCGGAAGATTATGCGGCGAGGATG
GTCGAGCAGGGTCGATTGAAGGGGAGTATTGATCAGATTGACGGGATAAT
ATACTTCGATGGAGGAAATGCGACTACAGGACAGCATATCCGGCAGTGGG
ATGCTGGGGTGCAGGGTTTGGCCGAGGACGTGGAGAGAGTGGCTACCAGC
ATTACCAATGCGTTTCCAGAATTCGCAGCTGGACAGCCAGCAGTGCATTG
AATGGCTTCCCAAAAAATCACCTCCGCCCTCGCGGAGATCGAATCCTCCG
CGAACCCCCAAAACAAGCTGCAGCTCTACAACAACCTCCTCAGCGACATC
GTATCGACGTCCACAGAACCCCAGATTTCTAGAGACCTAATTTACTTTCT
TGACTCCGTCCTCAGCGAAGACATCAGCATCGTCGCCGCCCGCCCCATCC
TCGACTCCTTCATCGTCGTCCTCCGCAAACTCACCCAAGAAACCCAAATC
AGCGTCGGCCAACACGCCATCACCCTCCTCCAATCCCGATCCACCTCTGT
CGAAGAACAAGACGCGCAGATCCGCGAGCTCCTCGCAGATGCCTACGAAG
CCGAAGGCCAGTACACCGACGCCGCAAAAGCCCTGCAGGGCATCCACATC
GACAGTTCGCAGCGTCTGGTCTCCGACGCAGCCAAGGTGCGGCTATGGAT
CCGGATTGTGAGATACTACCTCGAGGAAGACGATACCACAAGTGCGGAGG
CTTTCTTGAACCGCATCAAGAACCTACCGAGTAAGATCGAGGATCATGAG
TTGAAGCTACATTTCAAGCTATCCCAGGCTCGTATATTGGATGCTCGCCG
ACGCTTTCTCGATGCTAGTCAGGAATACTTCAATGTTAGCCTTGCGGCGG
GAGTGGATGAAGCGGATCGATTGCAGGCCTTGGCGGCTGCTATTCGGTGT
GCGGTGCTCGCTCCGGCCGGGCCGCAGCGGTCTCGGATCCTCGCGACGTT
GTATAAGGATGATCGGTCGACGTCGGTGGATGAGTTTGCTATCCTGGAGA
AAATGTTCCTGGATCGGTTGCTGACTCCAGAGGAGGTGGCTGCGTTCGCG
CAGCGGTTGGCGCCGCATCAGTTGGCTGTGACGGCTGATGGGTCTACGGT
GCTTGATAAGGCTGTTGTTGAACACAATTTGGTTGCGGCCAGCAAGCTTT
ACGAAAATATTACGACTGATGCGTTGGGTGCGATCCTGGGGCTTCAAGGG
AGCGGGGACTTCACGGCGGGGGAGAAGGCGGAAGATTATGCGGCGAGGAT
GGTCGAGCAGGGTCGATTGAAGGGGAGTATTGATCAGATTGACGGGATAA
TATACTTCGATGGAGGAAATGCGACTACAGGACAGCATATCCGGCAGTGG
GATGCTGGGGTGCAGGGTTTGGCCGAGGACGTGGAGAGAGTGGCTACCAG
CATTACCAATGCGTTTCCAGAATTCGCAGCTGGACAGCCAGCAGTGCATT
GA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036390 |
| DBxref | InterPro:IPR036388 |
| DBxref | InterPro:IPR019585 |
| DBxref | InterPro:IPR011990 |
| DBxref | InterPro:IPR000717 |
| DBxref | PFAM:PF10602 |
| DBxref | PFAM:PF01399 |
| Product | PCI domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000010.1 | supercontig | NKJJ01000010.1:536182..537488 + |
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