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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000010.1:618187..619243+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_13120-T1 ID=CAN33_13120-T1|Name=CAN33_13120-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1057bp|location=Sequence derived from alignment at NKJJ01000010.1:618187..619243+ (Aspergillus niger FDAARGOS_311)
ATGTGTATCGCGCTTCTATCCACCGCACATCCTTCCTATCCCTTGATCAT
CATCAACAACAGGGATGTACGCGACAATGATTCAAACCACATGCTCGGAT
CCGTCCAAAACTAACGGCGTCTAGGAATACATACGTCGACCGACATCTCC
CGCTGACTGGTGGCCTTCACCAGGGTCCAATATCTTAGGTGGCCGTGATC
TAGCGCGAGAGCCACATGGAACATGGATGGGAGTGACCAGAGAAGGCAAA
GTGGCAGTCTTGACCAACTACCGCGAGAATACATCAGAACAAGCTATTGG
GGCGAAGAGCCGGGGGGCCATTGTATGTAGCTGGCTTGCTGCGCCTTCTG
ACGAGAAGCGGTCAACCCGGGAATATGTGCAGGATATGGTTGCGAGTCCC
ACCGCCAGGAATGTCGGTGGGTTCAGCCTGCTTTGTGGATACATCAACGA
GCCCCTGGCAATCGTCTCCAATCGCTCATCCACCATGGACCAAATTGCAT
GGGTTGCCACAAAACCTGATCAGACTTTGGGTCTCAGTAACACAGTTTTC
GAGGATCGGTCATGGCCTAAGATTCTTGACGGCGAAAGACTGATGAATGA
AGCCATTGCTACGCACGTGCAGGCTGGGGAGGACGAAGATGCTCTTATTA
CCCGATTCCTTGATATGCTGAGCACCAATACACTCCCGAAGCTCTCAGAA
GATGCCACTGCGGAGGACTACCTTCCGTATTTTCGAAAGAGCATCTTCAT
TCCTATCCTGGGTGCTCGCGAGAAACCCGCGAAGCCGGCAGATACAGTAG
CTCCTGTGTGCGTTGATGGTAAGCAGGCAAATGGGGCTGCGGGAGGGGAG
CACCATGCAATGGATCTCTCATTCCTGCATGGTGCATATGGGACTCAACA
ACAAACGGTAGTACTGGTAAGCGGCGATGGACGTGTGCGATATTTCGAAC
GCACATTATATGACAACGATGCAAACGCGATCCCGATCGGCCAGGGTGAT
CGATCATTCGAATTTCACGTCGGTCAACACTGCAACGAAGCCGACAGAAC
TTCATGA back to topCoding sequence (CDS) from alignment at NKJJ01000010.1:618187..619243+ >CAN33_13120-T1 ID=CAN33_13120-T1|Name=CAN33_13120-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1998bp|location=Sequence derived from alignment at NKJJ01000010.1:618187..619243+ (Aspergillus niger FDAARGOS_311)
ATGTGTATCGCGCTTCTATCCACCGCACATCCTTCCTATCCCTTGATCAT
CATCAACAACAGGGATGAATACATACGTCGACCGACATCTCCCGCTGACT
GGTGGCCTTCACCAGGGTCCAATATCTTAGGTGGCCGTGATCTAGCGCGA
GAGCCACATGGAACATGGATGGGAGTGACCAGAGAAGGCAAAGTGGCAGT
CTTGACCAACTACCGCGAGAATACATCAGAACAAGCTATTGGGGCGAAGA
GCCGGGGGGCCATTGTATGTAGCTGGCTTGCTGCGCCTTCTGACGAGAAG
CGGTCAACCCGGGAATATGTGCAGGATATGGTTGCGAGTCCCACCGCCAG
GAATGTCGGTGGGTTCAGCCTGCTTTGTGGATACATCAACGAGCCCCTGG
CAATCGTCTCCAATCGCTCATCCACCATGGACCAAATTGCATGGGTTGCC
ACAAAACCTGATCAGACTTTGGGTCTCAGTAACACAGTTTTCGAGGATCG
GTCATGGCCTAAGATTCTTGACGGCGAAAGACTGATGAATGAAGCCATTG
CTACGCACGTGCAGGCTGGGGAGGACGAAGATGCTCTTATTACCCGATTC
CTTGATATGCTGAGCACCAATACACTCCCGAAGCTCTCAGAAGATGCCAC
TGCGGAGGACTACCTTCCGTATTTTCGAAAGAGCATCTTCATTCCTATCC
TGGGTGCTCGCGAGAAACCCGCGAAGCCGGCAGATACAGTAGCTCCTGTG
TGCGTTGATGGTAAGCAGGCAAATGGGGCTGCGGGAGGGGAGCACCATGC
AATGGATCTCTCATTCCTGCATGGTGCATATGGGACTCAACAACAAACGG
TAGTACTGGTAAGCGGCGATGGACGTGTGCGATATTTCGAACGCACATTA
TATGACAACGATGCAAACGCGATCCCGATCGGCCAGGGTGATCGATCATT
CGAATTTCACGTCGGTCAACACTGCAACGAAGCCGACAGAACTTCATGAA
TGTGTATCGCGCTTCTATCCACCGCACATCCTTCCTATCCCTTGATCATC
ATCAACAACAGGGATGAATACATACGTCGACCGACATCTCCCGCTGACTG
GTGGCCTTCACCAGGGTCCAATATCTTAGGTGGCCGTGATCTAGCGCGAG
AGCCACATGGAACATGGATGGGAGTGACCAGAGAAGGCAAAGTGGCAGTC
TTGACCAACTACCGCGAGAATACATCAGAACAAGCTATTGGGGCGAAGAG
CCGGGGGGCCATTGTATGTAGCTGGCTTGCTGCGCCTTCTGACGAGAAGC
GGTCAACCCGGGAATATGTGCAGGATATGGTTGCGAGTCCCACCGCCAGG
AATGTCGGTGGGTTCAGCCTGCTTTGTGGATACATCAACGAGCCCCTGGC
AATCGTCTCCAATCGCTCATCCACCATGGACCAAATTGCATGGGTTGCCA
CAAAACCTGATCAGACTTTGGGTCTCAGTAACACAGTTTTCGAGGATCGG
TCATGGCCTAAGATTCTTGACGGCGAAAGACTGATGAATGAAGCCATTGC
TACGCACGTGCAGGCTGGGGAGGACGAAGATGCTCTTATTACCCGATTCC
TTGATATGCTGAGCACCAATACACTCCCGAAGCTCTCAGAAGATGCCACT
GCGGAGGACTACCTTCCGTATTTTCGAAAGAGCATCTTCATTCCTATCCT
GGGTGCTCGCGAGAAACCCGCGAAGCCGGCAGATACAGTAGCTCCTGTGT
GCGTTGATGGTAAGCAGGCAAATGGGGCTGCGGGAGGGGAGCACCATGCA
ATGGATCTCTCATTCCTGCATGGTGCATATGGGACTCAACAACAAACGGT
AGTACTGGTAAGCGGCGATGGACGTGTGCGATATTTCGAACGCACATTAT
ATGACAACGATGCAAACGCGATCCCGATCGGCCAGGGTGATCGATCATTC
GAATTTCACGTCGGTCAACACTGCAACGAAGCCGACAGAACTTCATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR008551 |
| DBxref | PFAM:PF05742 |
| Product | NRDE protein family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000010.1 | supercontig | NKJJ01000010.1:618187..619243 + |
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