|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000010.1:626541..628565+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_13135-T1 ID=CAN33_13135-T1|Name=CAN33_13135-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2025bp|location=Sequence derived from alignment at NKJJ01000010.1:626541..628565+ (Aspergillus niger FDAARGOS_311)
ATGGAATCCGCACGCCGCTATAACGTCGAACGGTCCTGCCTGCGCTGCCA
TCAACGCAAGGTCCGCTGCGATAAGAGCTCTCCATGTGGGTCTTGTATAC
GAGCAAATGTGCTCTGTCAATACCCCGGCCCTAATCGCGTCAAGCGTCGG
CCTCCAAAAGTTCATAATTCTGATGTCATTGCCCGACTGGAATCACTTGA
GCGCTCCATCGCGGCTCTCGCTGGAAACCGATTGCTGCCTCACCTTCAGC
GCGAAGTGGCAGACGGACGGACCGTTTCTGCACCGGGTGCGGGGTCCCCC
TCTAGCAAAGAACCGTCCCCGACGGGCACAAGTGCGGCGGCGGAGCCATC
GCACGACGGCCTTCTAGTTGAGGACGGCCGGTATATCAATGAACAACTCT
TGTCTCGGGTCTTGGAAGATGAGAAAGAGCTTCAATCTGCCATTGGGACG
CCGAAAAGCGATACCAGCAGCTCCAGGCGCCCACTCACGCTCAGAGCGGA
AGGTCTCCTTGTCAGTCGCTATGTGGAGGAAGGAGATCTCTATAGCCTGC
ACCCGTGTCAGTGGCAGTCGACACAACTCTGGCAAACCTTCTTGAACCGC
ATCGACCCAATAATCAAGATACTTCACGTTCCATCGACTCAGCCGCGGAT
ATTCGCAGCTATCAACCAGCCAGCGGCCGCGCCCGCTGATCTCCATGCTT
TGCTTTTTGCCATCTTCTTTGCGGCCACAACAAGTGTGCTTGCCGAGGAC
CCAGCACATGAACAGCGGCGATCAGAAGTCAAGCGATACCAGCAAGGGCT
GGAACTTGCTCTCTATCAGTCGAATTTCTTGGACGCTCCCACACTAACAT
CGCTGCAAGCGATGAGTATCTACCAGGTAAGAACCAGCTAGCTAGTATTG
CCATATGGACTTGTAGCTCATCTTACGGCATATTTAGATGTGCTTGCGCT
ATTACAACAGCGGACGATCTGGATGGACGATGCGAGGGTTGGTTATCCGG
GCAGCACAATCCATTGGACTCCACCGTGACGGGAGACACTTCAAATTGAC
TCCGCTGGAATGTGAGCTGCGCCGCCGACTCTGGTGGCACATTTGTACGG
CTGATAGTCGCGCAGTCGAGGATCATGGAGTTGGTGTCAATAGCGGCGAG
GAGGTCTGCGACACCGCATTTCCTGCAAATATCGACGATCAGGACCTTTC
TGCTACGGCGACGGTGCCACCGGAGTCCAAAGACCGCTGGACAGAGATGA
CAGCATCCCTGATCACAACAGTAGTGAACGAAAAGCGCCTGGAATTGCAT
CGCATACTGACAACCAAAGTCACTGGGAAAGATCCCGCTGAGATAGCGCG
GGAAGCAAAAGAGCACGTATACAACACCTATATGCAACACGGCGACCCCA
ACATTCCGATCCAACGACACGGAATGATACTAGGGGAGGTTCTAGTACTG
AAGATGGAAATGTACTTGAACCAAAAAGCCCTCCAGACAAATAGCACCGC
AATACCGGTCGCGAAGCGTCGTGAGTTGCAGACCAAAACTCTGGACATCT
CCTGCCAAGCCCTCGAACGCACCAATGAAATGTTTACGGACGCGCTTCTC
CGCGGATATCGCTGGCTTTCTTCTACATTCATGCCTTACTTTCTCCTCAC
ATACATATTGTGGCACCTCTGTGTGTATCCAGTGGGGCTGCATGTTGAAC
GTGCATGGCGAGCAATTAACCTGGTTTTCGACCTGACCGAGAAGGACCCC
TGTGGCCAGACCCGGGGCCAAAGTGGGCGATAATCACTCGCCTGCGCGAC
AAGGCGTTGCATATCCGACAGATGCAGGTGGCTGCGGAGCAGGCCACGGG
CTCAGCCGATGAGAACCAACCGACAGGTGCCGATCAAGCGGAGGCGCCAA
TGGTTGAGTCGTTCTTCGACTTTGTAAATTGGGATATGGGCGTCCTTGGG
TTTCCGGACTGGACTGGCTTAATGCAGAGTGTCGACATTACGGGCTTCGA
GCATCTGATAGATACTCAGATTTGA back to topCoding sequence (CDS) from alignment at NKJJ01000010.1:626541..628565+ >CAN33_13135-T1 ID=CAN33_13135-T1|Name=CAN33_13135-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=7284bp|location=Sequence derived from alignment at NKJJ01000010.1:626541..628565+ (Aspergillus niger FDAARGOS_311)
ATGGAATCCGCACGCCGCTATAACGTCGAACGGTCCTGCCTGCGCTGCCA
TCAACGCAAGGTCCGCTGCGATAAGAGCTCTCCATGTGGGTCTTGTATAC
GAGCAAATGTGCTCTGTCAATACCCCGGCCCTAATCGCGTCAAGCGTCGG
CCTCCAAAAGTTCATAATTCTGATGTCATTGCCCGACTGGAATCACTTGA
GCGCTCCATCGCGGCTCTCGCTGGAAACCGATTGCTGCCTCACCTTCAGC
GCGAAGTGGCAGACGGACGGACCGTTTCTGCACCGGGTGCGGGGTCCCCC
TCTAGCAAAGAACCGTCCCCGACGGGCACAAGTGCGGCGGCGGAGCCATC
GCACGACGGCCTTCTAGTTGAGGACGGCCGGTATATCAATGAACAACTCT
TGTCTCGGGTCTTGGAAGATGAGAAAGAGCTTCAATCTGCCATTGGGACG
CCGAAAAGCGATACCAGCAGCTCCAGGCGCCCACTCACGCTCAGAGCGGA
AGGTCTCCTTGTCAGTCGCTATGTGGAGGAAGGAGATCTCTATAGCCTGC
ACCCGTGTCAGTGGCAGTCGACACAACTCTGGCAAACCTTCTTGAACCGC
ATCGACCCAATAATCAAGATACTTCACGTTCCATCGACTCAGCCGCGGAT
ATTCGCAGCTATCAACCAGCCAGCGGCCGCGCCCGCTGATCTCCATGCTT
TGCTTTTTGCCATCTTCTTTGCGGCCACAACAAGTGTGCTTGCCGAGGAC
CCAGCACATGAACAGCGGCGATCAGAAGTCAAGCGATACCAGCAAGGGCT
GGAACTTGCTCTCTATCAGTCGAATTTCTTGGACGCTCCCACACTAACAT
CGCTGCAAGCGATGAGTATCTACCAGATGTGCTTGCGCTATTACAACAGC
GGACGATCTGGATGGACGATGCGAGGGTTGGTTATCCGGGCAGCACAATC
CATTGGACTCCACCGTGACGGGAGACACTTCAAATTGACTCCGCTGGAAT
TCGAGGATCATGGAGTTGGTGTCAATAGCGGCGAGGAGGTCTGCGACACC
GCATTTCCTGCAAATATCGACGATCAGGACCTTTCTGCTACGGCGACGGT
GCCACCGGAGTCCAAAGACCGCTGGACAGAGATGACAGCATCCCTGATCA
CAACAGTAGTGAACGAAAAGCGCCTGGAATTGCATCGCATACTGACAACC
AAAGTCACTGGGAAAGATCCCGCTGAGATAGCGCGGGAAGCAAAAGAGCA
CGTATACAACACCTATATGCAACACGGCGACCCCAACATTCCGATCCAAC
GACACGGAATGATACTAGGGGAGGTTCTAGTACTGAAGATGGAAATGTAC
TTGAACCAAAAAGCCCTCCAGACAAATAGCACCGCAATACCGGTCGCGAA
GCGTCGTGAGTTGCAGACCAAAACTCTGGACATCTCCTGCCAAGCCCTCG
AACGCACCAATGAAATGTTTACGGACGCGCTTCTCCGCGGATATCGCTGG
CTTTCTTCTACATTCATGCCTTACTTTCTCCTCACATACATATTGTGGCA
CCTCTACCCGGGGCCAAAGTGGGCGATAATCACTCGCCTGCGCGACAAGG
CGTTGCATATCCGACAGATGCAGGTGGCTGCGGAGCAGGCCACGGGCTCA
GCCGATGAGAACCAACCGACAGGTGCCGATCAAGCGGAGGCGCCAATGGT
TGAGTCGTTCTTCGACTTTGTAAATTGGGATATGGGCGTCCTTGGGTTTC
CGGACTGGACTGGCTTAATGCAGAGTGTCGACATTACGGGCTTCGAGCAT
CTGATAGATACTCAGATTTGAATGGAATCCGCACGCCGCTATAACGTCGA
ACGGTCCTGCCTGCGCTGCCATCAACGCAAGGTCCGCTGCGATAAGAGCT
CTCCATGTGGGTCTTGTATACGAGCAAATGTGCTCTGTCAATACCCCGGC
CCTAATCGCGTCAAGCGTCGGCCTCCAAAAGTTCATAATTCTGATGTCAT
TGCCCGACTGGAATCACTTGAGCGCTCCATCGCGGCTCTCGCTGGAAACC
GATTGCTGCCTCACCTTCAGCGCGAAGTGGCAGACGGACGGACCGTTTCT
GCACCGGGTGCGGGGTCCCCCTCTAGCAAAGAACCGTCCCCGACGGGCAC
AAGTGCGGCGGCGGAGCCATCGCACGACGGCCTTCTAGTTGAGGACGGCC
GGTATATCAATGAACAACTCTTGTCTCGGGTCTTGGAAGATGAGAAAGAG
CTTCAATCTGCCATTGGGACGCCGAAAAGCGATACCAGCAGCTCCAGGCG
CCCACTCACGCTCAGAGCGGAAGGTCTCCTTGTCAGTCGCTATGTGGAGG
AAGGAGATCTCTATAGCCTGCACCCGTGTCAGTGGCAGTCGACACAACTC
TGGCAAACCTTCTTGAACCGCATCGACCCAATAATCAAGATACTTCACGT
TCCATCGACTCAGCCGCGGATATTCGCAGCTATCAACCAGCCAGCGGCCG
CGCCCGCTGATCTCCATGCTTTGCTTTTTGCCATCTTCTTTGCGGCCACA
ACAAGTGTGCTTGCCGAGGACCCAGCACATGAACAGCGGCGATCAGAAGT
CAAGCGATACCAGCAAGGGCTGGAACTTGCTCTCTATCAGTCGAATTTCT
TGGACGCTCCCACACTAACATCGCTGCAAGCGATGAGTATCTACCAGATG
TGCTTGCGCTATTACAACAGCGGACGATCTGGATGGACGATGCGAGGGTT
GGTTATCCGGGCAGCACAATCCATTGGACTCCACCGTGACGGGAGACACT
TCAAATTGACTCCGCTGGAATTCGAGGATCATGGAGTTGGTGTCAATAGC
GGCGAGGAGGTCTGCGACACCGCATTTCCTGCAAATATCGACGATCAGGA
CCTTTCTGCTACGGCGACGGTGCCACCGGAGTCCAAAGACCGCTGGACAG
AGATGACAGCATCCCTGATCACAACAGTAGTGAACGAAAAGCGCCTGGAA
TTGCATCGCATACTGACAACCAAAGTCACTGGGAAAGATCCCGCTGAGAT
AGCGCGGGAAGCAAAAGAGCACGTATACAACACCTATATGCAACACGGCG
ACCCCAACATTCCGATCCAACGACACGGAATGATACTAGGGGAGGTTCTA
GTACTGAAGATGGAAATGTACTTGAACCAAAAAGCCCTCCAGACAAATAG
CACCGCAATACCGGTCGCGAAGCGTCGTGAGTTGCAGACCAAAACTCTGG
ACATCTCCTGCCAAGCCCTCGAACGCACCAATGAAATGTTTACGGACGCG
CTTCTCCGCGGATATCGCTGGCTTTCTTCTACATTCATGCCTTACTTTCT
CCTCACATACATATTGTGGCACCTCTACCCGGGGCCAAAGTGGGCGATAA
TCACTCGCCTGCGCGACAAGGCGTTGCATATCCGACAGATGCAGGTGGCT
GCGGAGCAGGCCACGGGCTCAGCCGATGAGAACCAACCGACAGGTGCCGA
TCAAGCGGAGGCGCCAATGGTTGAGTCGTTCTTCGACTTTGTAAATTGGG
ATATGGGCGTCCTTGGGTTTCCGGACTGGACTGGCTTAATGCAGAGTGTC
GACATTACGGGCTTCGAGCATCTGATAGATACTCAGATTTGAATGGAATC
CGCACGCCGCTATAACGTCGAACGGTCCTGCCTGCGCTGCCATCAACGCA
AGGTCCGCTGCGATAAGAGCTCTCCATGTGGGTCTTGTATACGAGCAAAT
GTGCTCTGTCAATACCCCGGCCCTAATCGCGTCAAGCGTCGGCCTCCAAA
AGTTCATAATTCTGATGTCATTGCCCGACTGGAATCACTTGAGCGCTCCA
TCGCGGCTCTCGCTGGAAACCGATTGCTGCCTCACCTTCAGCGCGAAGTG
GCAGACGGACGGACCGTTTCTGCACCGGGTGCGGGGTCCCCCTCTAGCAA
AGAACCGTCCCCGACGGGCACAAGTGCGGCGGCGGAGCCATCGCACGACG
GCCTTCTAGTTGAGGACGGCCGGTATATCAATGAACAACTCTTGTCTCGG
GTCTTGGAAGATGAGAAAGAGCTTCAATCTGCCATTGGGACGCCGAAAAG
CGATACCAGCAGCTCCAGGCGCCCACTCACGCTCAGAGCGGAAGGTCTCC
TTGTCAGTCGCTATGTGGAGGAAGGAGATCTCTATAGCCTGCACCCGTGT
CAGTGGCAGTCGACACAACTCTGGCAAACCTTCTTGAACCGCATCGACCC
AATAATCAAGATACTTCACGTTCCATCGACTCAGCCGCGGATATTCGCAG
CTATCAACCAGCCAGCGGCCGCGCCCGCTGATCTCCATGCTTTGCTTTTT
GCCATCTTCTTTGCGGCCACAACAAGTGTGCTTGCCGAGGACCCAGCACA
TGAACAGCGGCGATCAGAAGTCAAGCGATACCAGCAAGGGCTGGAACTTG
CTCTCTATCAGTCGAATTTCTTGGACGCTCCCACACTAACATCGCTGCAA
GCGATGAGTATCTACCAGATGTGCTTGCGCTATTACAACAGCGGACGATC
TGGATGGACGATGCGAGGGTTGGTTATCCGGGCAGCACAATCCATTGGAC
TCCACCGTGACGGGAGACACTTCAAATTGACTCCGCTGGAATTCGAGGAT
CATGGAGTTGGTGTCAATAGCGGCGAGGAGGTCTGCGACACCGCATTTCC
TGCAAATATCGACGATCAGGACCTTTCTGCTACGGCGACGGTGCCACCGG
AGTCCAAAGACCGCTGGACAGAGATGACAGCATCCCTGATCACAACAGTA
GTGAACGAAAAGCGCCTGGAATTGCATCGCATACTGACAACCAAAGTCAC
TGGGAAAGATCCCGCTGAGATAGCGCGGGAAGCAAAAGAGCACGTATACA
ACACCTATATGCAACACGGCGACCCCAACATTCCGATCCAACGACACGGA
ATGATACTAGGGGAGGTTCTAGTACTGAAGATGGAAATGTACTTGAACCA
AAAAGCCCTCCAGACAAATAGCACCGCAATACCGGTCGCGAAGCGTCGTG
AGTTGCAGACCAAAACTCTGGACATCTCCTGCCAAGCCCTCGAACGCACC
AATGAAATGTTTACGGACGCGCTTCTCCGCGGATATCGCTGGCTTTCTTC
TACATTCATGCCTTACTTTCTCCTCACATACATATTGTGGCACCTCTACC
CGGGGCCAAAGTGGGCGATAATCACTCGCCTGCGCGACAAGGCGTTGCAT
ATCCGACAGATGCAGGTGGCTGCGGAGCAGGCCACGGGCTCAGCCGATGA
GAACCAACCGACAGGTGCCGATCAAGCGGAGGCGCCAATGGTTGAGTCGT
TCTTCGACTTTGTAAATTGGGATATGGGCGTCCTTGGGTTTCCGGACTGG
ACTGGCTTAATGCAGAGTGTCGACATTACGGGCTTCGAGCATCTGATAGA
TACTCAGATTTGAATGGAATCCGCACGCCGCTATAACGTCGAACGGTCCT
GCCTGCGCTGCCATCAACGCAAGGTCCGCTGCGATAAGAGCTCTCCATGT
GGGTCTTGTATACGAGCAAATGTGCTCTGTCAATACCCCGGCCCTAATCG
CGTCAAGCGTCGGCCTCCAAAAGTTCATAATTCTGATGTCATTGCCCGAC
TGGAATCACTTGAGCGCTCCATCGCGGCTCTCGCTGGAAACCGATTGCTG
CCTCACCTTCAGCGCGAAGTGGCAGACGGACGGACCGTTTCTGCACCGGG
TGCGGGGTCCCCCTCTAGCAAAGAACCGTCCCCGACGGGCACAAGTGCGG
CGGCGGAGCCATCGCACGACGGCCTTCTAGTTGAGGACGGCCGGTATATC
AATGAACAACTCTTGTCTCGGGTCTTGGAAGATGAGAAAGAGCTTCAATC
TGCCATTGGGACGCCGAAAAGCGATACCAGCAGCTCCAGGCGCCCACTCA
CGCTCAGAGCGGAAGGTCTCCTTGTCAGTCGCTATGTGGAGGAAGGAGAT
CTCTATAGCCTGCACCCGTGTCAGTGGCAGTCGACACAACTCTGGCAAAC
CTTCTTGAACCGCATCGACCCAATAATCAAGATACTTCACGTTCCATCGA
CTCAGCCGCGGATATTCGCAGCTATCAACCAGCCAGCGGCCGCGCCCGCT
GATCTCCATGCTTTGCTTTTTGCCATCTTCTTTGCGGCCACAACAAGTGT
GCTTGCCGAGGACCCAGCACATGAACAGCGGCGATCAGAAGTCAAGCGAT
ACCAGCAAGGGCTGGAACTTGCTCTCTATCAGTCGAATTTCTTGGACGCT
CCCACACTAACATCGCTGCAAGCGATGAGTATCTACCAGATGTGCTTGCG
CTATTACAACAGCGGACGATCTGGATGGACGATGCGAGGGTTGGTTATCC
GGGCAGCACAATCCATTGGACTCCACCGTGACGGGAGACACTTCAAATTG
ACTCCGCTGGAATTCGAGGATCATGGAGTTGGTGTCAATAGCGGCGAGGA
GGTCTGCGACACCGCATTTCCTGCAAATATCGACGATCAGGACCTTTCTG
CTACGGCGACGGTGCCACCGGAGTCCAAAGACCGCTGGACAGAGATGACA
GCATCCCTGATCACAACAGTAGTGAACGAAAAGCGCCTGGAATTGCATCG
CATACTGACAACCAAAGTCACTGGGAAAGATCCCGCTGAGATAGCGCGGG
AAGCAAAAGAGCACGTATACAACACCTATATGCAACACGGCGACCCCAAC
ATTCCGATCCAACGACACGGAATGATACTAGGGGAGGTTCTAGTACTGAA
GATGGAAATGTACTTGAACCAAAAAGCCCTCCAGACAAATAGCACCGCAA
TACCGGTCGCGAAGCGTCGTGAGTTGCAGACCAAAACTCTGGACATCTCC
TGCCAAGCCCTCGAACGCACCAATGAAATGTTTACGGACGCGCTTCTCCG
CGGATATCGCTGGCTTTCTTCTACATTCATGCCTTACTTTCTCCTCACAT
ACATATTGTGGCACCTCTACCCGGGGCCAAAGTGGGCGATAATCACTCGC
CTGCGCGACAAGGCGTTGCATATCCGACAGATGCAGGTGGCTGCGGAGCA
GGCCACGGGCTCAGCCGATGAGAACCAACCGACAGGTGCCGATCAAGCGG
AGGCGCCAATGGTTGAGTCGTTCTTCGACTTTGTAAATTGGGATATGGGC
GTCCTTGGGTTTCCGGACTGGACTGGCTTAATGCAGAGTGTCGACATTAC
GGGCTTCGAGCATCTGATAGATACTCAGATTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR007219 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| DBxref | PFAM:PF04082 |
| Product | Fungal specific transcription factor domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000010.1 | supercontig | NKJJ01000010.1:626541..628565 + |
|
