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CAN33_13155-T1, CAN33_13155-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_13155-T1
Unique NameCAN33_13155-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000010.1:635853..636858-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_13155-T1 ID=CAN33_13155-T1|Name=CAN33_13155-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1006bp|location=Sequence derived from alignment at NKJJ01000010.1:635853..636858- (Aspergillus niger FDAARGOS_311)
ATGGCTGAACAGAACCACATTAACTTCAAGTTGTACAGATATACACCCAG
CCGCGCCGCAGCAGGGATATTCGTGGCCCTTTTTCTCCTCACGACAATAT
ACCATATCTATCAGTTGTGGCGCAGACGGGCATGGTACTTTATTGCCTTC
GTAATCGGAGGAATATGTAAGTCAGACTCTCTTGTTTCTCTCCTCATGAG
CGTGAGAGACCGATGGAAAAGAGTACTAATAGTGAGCCTTTAGTCCAGAT
CATCGGCTATGTCTGCCGCATTCTCGCCCATAATCACAAAGAATCAGTTC
CAATTTACAGCGTGCAGACCATCCTTATCCTTCTCGCACCGCCACTCTAC
GCTGCCTCGATTTATATGGTCTTGGGCCGCCTTATTACCTTTTTACGTGC
CGAAAAGCTCAGTCTGGTTCCTGTCCGGTGGATGACTAAGATCTTCGTCG
TAGGAGACGTGATTGGATTCGTCGCGCAGGCTGCAGGTTCGGAGTCTTCT
ATCATCTCCCTTTGACTACTAAGACATCTAACGGAGCCCTGCTAGGCGGC
GGCATCATGGCATCCGGCACGATAGAAAACTACAACCTCGGCGAAGACGT
CACCGTCGCCGGCCTGGCGGTTCAACTAGCCTTCTTCAGTGTCTTCATAG
TAACCTGCGGGATATTCCACCGCCGCATCCGACAATGGCCTACACAGGAA
GTGACAGTTATCTCGGCCCGTCTCCGCGAACAGAAGAGACCGGGTTGGGA
AACTGTCCTCGCGGGACTCTATGCTGCGAGTCTACTGATTCTTGTGCGGT
CCATCTTTCGGATTATCGAGTATGCGCAAGGCAATGATGGGTATCTTATA
AGCCATGAGGCGTTTATGTATGTGTTTGACTCGACCCTGATGTTTTTTAC
CATGGGTGTCATGAACGTGTGCCATCCTTCGATGATTCTGGTTGGGTCTC
AGAAAGGGAGAGATGCGGAGATGAGAGTTCTCGAGTCTGATGAGCAGAGT
AGTTAA
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Coding sequence (CDS) from alignment at NKJJ01000010.1:635853..636858-

>CAN33_13155-T1 ID=CAN33_13155-T1|Name=CAN33_13155-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2610bp|location=Sequence derived from alignment at NKJJ01000010.1:635853..636858- (Aspergillus niger FDAARGOS_311)
GCGGCGGCATCATGGCATCCGGCACGATAGAAAACTACAACCTCGGCGAA
GACGTCACCGTCGCCGGCCTGGCGGTTCAACTAGCCTTCTTCAGTGTCTT
CATAGTAACCTGCGGGATATTCCACCGCCGCATCCGACAATGGCCTACAC
AGGAAGTGACAGTTATCTCGGCCCGTCTCCGCGAACAGAAGAGACCGGGT
TGGGAAACTGTCCTCGCGGGACTCTATGCTGCGAGTCTACTGATTCTTGT
GCGGTCCATCTTTCGGATTATCGAGTATGCGCAAGGCAATGATGGGTATC
TTATAAGCCATGAGGCGTTTATGTATGTGTTTGACTCGACCCTGATGTTT
TTTACCATGGGTGTCATGAACGTGTGCCATCCTTCGATGATTCTGGTTGG
GTCTCAGAAAGGGAGAGATGCGGAGATGAGAGTTCTCGAGTCTGATGAGC
AGAGTAGTTAATCCAGATCATCGGCTATGTCTGCCGCATTCTCGCCCATA
ATCACAAAGAATCAGTTCCAATTTACAGCGTGCAGACCATCCTTATCCTT
CTCGCACCGCCACTCTACGCTGCCTCGATTTATATGGTCTTGGGCCGCCT
TATTACCTTTTTACGTGCCGAAAAGCTCAGTCTGGTTCCTGTCCGGTGGA
TGACTAAGATCTTCGTCGTAGGAGACGTGATTGGATTCGTCGCGCAGGCT
GCAGATGGCTGAACAGAACCACATTAACTTCAAGTTGTACAGATATACAC
CCAGCCGCGCCGCAGCAGGGATATTCGTGGCCCTTTTTCTCCTCACGACA
ATATACCATATCTATCAGTTGTGGCGCAGACGGGCATGGTACTTTATTGC
CTTCGTAATCGGAGGAATATGCGGCGGCATCATGGCATCCGGCACGATAG
AAAACTACAACCTCGGCGAAGACGTCACCGTCGCCGGCCTGGCGGTTCAA
CTAGCCTTCTTCAGTGTCTTCATAGTAACCTGCGGGATATTCCACCGCCG
CATCCGACAATGGCCTACACAGGAAGTGACAGTTATCTCGGCCCGTCTCC
GCGAACAGAAGAGACCGGGTTGGGAAACTGTCCTCGCGGGACTCTATGCT
GCGAGTCTACTGATTCTTGTGCGGTCCATCTTTCGGATTATCGAGTATGC
GCAAGGCAATGATGGGTATCTTATAAGCCATGAGGCGTTTATGTATGTGT
TTGACTCGACCCTGATGTTTTTTACCATGGGTGTCATGAACGTGTGCCAT
CCTTCGATGATTCTGGTTGGGTCTCAGAAAGGGAGAGATGCGGAGATGAG
AGTTCTCGAGTCTGATGAGCAGAGTAGTTAATCCAGATCATCGGCTATGT
CTGCCGCATTCTCGCCCATAATCACAAAGAATCAGTTCCAATTTACAGCG
TGCAGACCATCCTTATCCTTCTCGCACCGCCACTCTACGCTGCCTCGATT
TATATGGTCTTGGGCCGCCTTATTACCTTTTTACGTGCCGAAAAGCTCAG
TCTGGTTCCTGTCCGGTGGATGACTAAGATCTTCGTCGTAGGAGACGTGA
TTGGATTCGTCGCGCAGGCTGCAGATGGCTGAACAGAACCACATTAACTT
CAAGTTGTACAGATATACACCCAGCCGCGCCGCAGCAGGGATATTCGTGG
CCCTTTTTCTCCTCACGACAATATACCATATCTATCAGTTGTGGCGCAGA
CGGGCATGGTACTTTATTGCCTTCGTAATCGGAGGAATATGCGGCGGCAT
CATGGCATCCGGCACGATAGAAAACTACAACCTCGGCGAAGACGTCACCG
TCGCCGGCCTGGCGGTTCAACTAGCCTTCTTCAGTGTCTTCATAGTAACC
TGCGGGATATTCCACCGCCGCATCCGACAATGGCCTACACAGGAAGTGAC
AGTTATCTCGGCCCGTCTCCGCGAACAGAAGAGACCGGGTTGGGAAACTG
TCCTCGCGGGACTCTATGCTGCGAGTCTACTGATTCTTGTGCGGTCCATC
TTTCGGATTATCGAGTATGCGCAAGGCAATGATGGGTATCTTATAAGCCA
TGAGGCGTTTATGTATGTGTTTGACTCGACCCTGATGTTTTTTACCATGG
GTGTCATGAACGTGTGCCATCCTTCGATGATTCTGGTTGGGTCTCAGAAA
GGGAGAGATGCGGAGATGAGAGTTCTCGAGTCTGATGAGCAGAGTAGTTA
ATCCAGATCATCGGCTATGTCTGCCGCATTCTCGCCCATAATCACAAAGA
ATCAGTTCCAATTTACAGCGTGCAGACCATCCTTATCCTTCTCGCACCGC
CACTCTACGCTGCCTCGATTTATATGGTCTTGGGCCGCCTTATTACCTTT
TTACGTGCCGAAAAGCTCAGTCTGGTTCCTGTCCGGTGGATGACTAAGAT
CTTCGTCGTAGGAGACGTGATTGGATTCGTCGCGCAGGCTGCAGATGGCT
GAACAGAACCACATTAACTTCAAGTTGTACAGATATACACCCAGCCGCGC
CGCAGCAGGGATATTCGTGGCCCTTTTTCTCCTCACGACAATATACCATA
TCTATCAGTTGTGGCGCAGACGGGCATGGTACTTTATTGCCTTCGTAATC
GGAGGAATAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_13155CAN33_13155Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_13155-T1CAN33_13155-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_13155-T1.cdsCAN33_13155-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_13155-T1.exon3CAN33_13155-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_13155-T1.exon2CAN33_13155-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_13155-T1.exon1CAN33_13155-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000101.1
NoteEggNog:ENOG41
DBxrefInterPro:IPR007568
DBxrefPFAM:PF04479
ProductRTA1 like protein family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000010.1supercontigNKJJ01000010.1:635853..636858 -
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