You are here

Home

CAN33_13300-T1, CAN33_13300-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_13300-T1
Unique NameCAN33_13300-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000010.1:753287..753681+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_13300-T1 ID=CAN33_13300-T1|Name=CAN33_13300-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=395bp|location=Sequence derived from alignment at NKJJ01000010.1:753287..753681+ (Aspergillus niger FDAARGOS_311)
ATGGTGACGAGGGAGTATGCGCTTGTTTGTAATGGGCGGTTAGTATTTCC
CTATTTCTCTTGGGGTGTGTGAGGGTGTGAGGTGTGTGGATGAATCAAGC
TGACTACTTGTGTGTTGCGTCTAGGTTGGTTTCAGTTGCGCGCGGCGAAC
AGGATTACTTCTCTCCCGATGGAATCCCGACTGCTACGGAGGGATGTCGG
TCGAATGCATTGGTGCGGTGTTGTAAGGATCTGGGGATTGCGAGCGAATT
GTGGGATCCCAGGTGGATTCGGAAGTTCAAGGCGCAGTATACGCGGGAGG
CGTTTGTGGAGCACGTGGTGAATAAACGGAAGACGAAGATTTGGGTGAGG
AAGGATGATACGGTTGGGTATCCGTGGAAGGAGACGAAGTTTTAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000010.1:753287..753681+

>CAN33_13300-T1 ID=CAN33_13300-T1|Name=CAN33_13300-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=618bp|location=Sequence derived from alignment at NKJJ01000010.1:753287..753681+ (Aspergillus niger FDAARGOS_311)
ATGGTGACGAGGGAGTATGCGCTTGTTTGTAATGGGCGGTTGGTTTCAGT
TGCGCGCGGCGAACAGGATTACTTCTCTCCCGATGGAATCCCGACTGCTA
CGGAGGGATGTCGGTCGAATGCATTGGTGCGGTGTTGTAAGGATCTGGGG
ATTGCGAGCGAATTGTGGGATCCCAGGTGGATTCGGAAGTTCAAGGCGCA
GTATACGCGGGAGGCGTTTGTGGAGCACGTGGTGAATAAACGGAAGACGA
AGATTTGGGTGAGGAAGGATGATACGGTTGGGTATCCGTGGAAGGAGACG
AAGTTTTAGATGGTGACGAGGGAGTATGCGCTTGTTTGTAATGGGCGGTT
GGTTTCAGTTGCGCGCGGCGAACAGGATTACTTCTCTCCCGATGGAATCC
CGACTGCTACGGAGGGATGTCGGTCGAATGCATTGGTGCGGTGTTGTAAG
GATCTGGGGATTGCGAGCGAATTGTGGGATCCCAGGTGGATTCGGAAGTT
CAAGGCGCAGTATACGCGGGAGGCGTTTGTGGAGCACGTGGTGAATAAAC
GGAAGACGAAGATTTGGGTGAGGAAGGATGATACGGTTGGGTATCCGTGG
AAGGAGACGAAGTTTTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000262mitochondrial chromosome
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
GO:0000002mitochondrial genome maintenance
Vocabulary: Molecular Function
TermDefinition
GO:0003697single-stranded DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_13300CAN33_13300Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_13300-T1.exon1CAN33_13300-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_13300-T1.exon2CAN33_13300-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_13300-T1.cdsCAN33_13300-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_13300-T1CAN33_13300-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR009446
DBxrefPFAM:PF06420
ProductMitochondrial genome maintenance MGM101 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000010.1supercontigNKJJ01000010.1:753287..753681 +
Powered by Drupal