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CAN33_13500-T1, CAN33_13500-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_13500-T1
Unique NameCAN33_13500-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000010.1:873779..876194+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_13500-T1 ID=CAN33_13500-T1|Name=CAN33_13500-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2416bp|location=Sequence derived from alignment at NKJJ01000010.1:873779..876194+ (Aspergillus niger FDAARGOS_311)
ATGCGACAACCGTTCCAGGTAACCCAGTCAGTACACCTCGATCTCAGTCC
AGAGCATTTGGTGCTGATTTTGGCCGTTGAACAGATTCTAGGCGTTCACT
ACCCCAAACAGATTCGGGCCATCGAAGCGATTAAGCAGGGATCAAAGCGC
CCGCTCACGCTTGCTGAAAAGACACTATACAGTCACTTACTGGACACGGA
TAGCGGTCGTTGGAACATTGATAAGATTACGCGGGGAAAGACCATTTTGG
AGCTACGCCCTGATCGTGTTGCCTGCCATGATGCGACTGCAACAATGGCT
TTACTACAGTTTATCAGCGCTGGCCTCCCGCGTGTGATGGTACCGACAAC
AGTGCACAGCGATCATCTTATCATCTCAGAGAATGGCGCGGAGAAAGATA
TGCAGCGTGCGACCACAGAACACGCAGAGGTATATGATTTCTTGAGTAGC
GCTTCGAAGAAGTACGGGATCGGCTTCTGGAAGCCTGGATCTGGAATCAT
CCATACTGTCATTTTTGAGAACTACGCGATGTATGTCTACCACATGAAGA
CCGCAATTACCATCACTGACAATTTTGGGACATAGGCCTGGAGGTTTGAT
TATCGGTACGGATTCTCATACGCCCAATGCAGGTGGGATGGGCATGCTTG
GAATTGGCGTTGGCGGAGCCGATGCTGTTGACGCAATGTCGGGGATGGCT
TGGGAGTTGGTTGCGCCGAAAGTCATTGGAGTCGAACTTACGGGCGAGCT
TCAAGGTTGGGCGTCAACAAAAGATATTATCTGTAAACTGGCAGGAATAC
TCAGTGTATCGGGCGGGAAAGGTCGCATCATTGAATTCTTCGGTCCTGGT
ACGAAGACCCTGGGCGCGACAGCTATGGCTACCATTTGCAACATGTCTGC
GGAAATTGGGTCGACTTCTTGTATCTTCCCCTACTCGGATGCGATCGCCC
GCTATTTGAGTGCCACTGCGCGCGATCATGTTGTGAAAGCGGCAAACTCA
GTCAAAGACCTTCTACTCACCGCAGATGAGGGCTCCGAGGAGTACTACGA
CGAAATCATCAAGATCGATTTGGACACTCTGGAGCCGCATGTTAACGGTC
CTTTCACACCGGATCTAGCTCATCCCATCTCGAAGCTGTCTACTGCGGTC
GCTGAGAGCGATTGGCCTGTGAACCTAAGCCACGCCATGGTGGGTAGCTG
TACCAACAGCTCCTATGAGGATTTGGACAAGGCTCGGCAGCTGGTTAACC
AAGCCCGGGCGGCCGGAATAACAAAGTTCAAGACTCCTTTCTTGGTTTCA
CCAGGTAGCGAAAGAATTCGGGCTACCGCCGAGGAGGCTGGTATCCTGCA
GGATCTCGAGGACGCTGGTGCTATGATCCTCAGCAGCTCTTGCGGACCGT
GTGTCGGGTCGTGGGACCGCAAGGACGTGGATGTCCGCGGAAAAGAGAAG
AACTCGGTGATCTCCAGCTACAACCGTAACTTTGTGGGGCGCCACGACAG
CAATCCGGCCACGCACTCATTCGTCACGTCGCCGGAGCTAGTCACAGCCT
TTGCTTATGCTGGTCGCCTGGACTTTAACCCTGTCACTGACAGTATCTCT
GCGGAAGGATCTCAGCCACTGCGGCTTACGCCTCCTGTAGGTCAGGAATT
GCCAGAATCATTCAATTCCGGTGCAGATCGCTTTCAAGAGCCTCCGTCAG
ATGGCTCATCCTACTCGGTTATTATCGATGAGAAGTCCGACAGGCTACAA
CTCTTGAAGCCCTTCCCGGCGTGGAAGCACGGAAATGCAACGGACATGGA
GTTGCTGATGAAGGTAAAGGGCAAGTGTACGACGGATCACATATCCCCGG
CTGGCCCGTGGTACAAATATCGCGGTCATCTGGAGAACATCAGCCACAAC
ATGCTCACCACCGCAACCAATGCATTCTTAGACAATGACCCGCAAATGCT
AGGCCATACGACACATCCGCTAACGCGCAAGGTCCAGCTTACTCATGAAG
TGGCCCGAGACTTGAAGCACCGTTCCATTCGTTGGTGCGTGGTTGGAGAC
AACAACTACGGTGAGGGTAGTTCGCGAGAGCATGCCGCACTGGAGCCTCG
CTTCCTCGGTGGCATTGCCATCATAGCCCGGTCTTTCGCTCGTATCCACG
AGACGAATCTGAAGAAACAGGGAATGCTTCCGCTCACATTCGCTGATCCT
GCTGACTACGACCGAGTGCAGGAGGGAGATCGCATCACTCTGATTGGCGT
AGAAGATGGAGAGCTGCAACCGGGGAAGAATGTCACCATGCGGGTTACTC
CGCGCCATGGAGACGCCTGGGAGGCTGAGTTGTGCCACAGCTATCATGCC
GGACAGCTCCCGTGGCTCCGGGCTGGTAGTGCCTTGAACCATATCAAGGC
TACTGTACGCAGCTGA
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Coding sequence (CDS) from alignment at NKJJ01000010.1:873779..876194+

>CAN33_13500-T1 ID=CAN33_13500-T1|Name=CAN33_13500-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4722bp|location=Sequence derived from alignment at NKJJ01000010.1:873779..876194+ (Aspergillus niger FDAARGOS_311)
ATGCGACAACCGTTCCAGGTAACCCAGTCAGTACACCTCGATCTCAGTCC
AGAGCATTTGGTGCTGATTTTGGCCGTTGAACAGATTCTAGGCGTTCACT
ACCCCAAACAGATTCGGGCCATCGAAGCGATTAAGCAGGGATCAAAGCGC
CCGCTCACGCTTGCTGAAAAGACACTATACAGTCACTTACTGGACACGGA
TAGCGGTCGTTGGAACATTGATAAGATTACGCGGGGAAAGACCATTTTGG
AGCTACGCCCTGATCGTGTTGCCTGCCATGATGCGACTGCAACAATGGCT
TTACTACAGTTTATCAGCGCTGGCCTCCCGCGTGTGATGGTACCGACAAC
AGTGCACAGCGATCATCTTATCATCTCAGAGAATGGCGCGGAGAAAGATA
TGCAGCGTGCGACCACAGAACACGCAGAGGTATATGATTTCTTGAGTAGC
GCTTCGAAGAAGTACGGGATCGGCTTCTGGAAGCCTGGATCTGGAATCAT
CCATACTGTCATTTTTGAGAACTACGCGATGCCTGGAGGTTTGATTATCG
GTACGGATTCTCATACGCCCAATGCAGGTGGGATGGGCATGCTTGGAATT
GGCGTTGGCGGAGCCGATGCTGTTGACGCAATGTCGGGGATGGCTTGGGA
GTTGGTTGCGCCGAAAGTCATTGGAGTCGAACTTACGGGCGAGCTTCAAG
GTTGGGCGTCAACAAAAGATATTATCTGTAAACTGGCAGGAATACTCAGT
GTATCGGGCGGGAAAGGTCGCATCATTGAATTCTTCGGTCCTGGTACGAA
GACCCTGGGCGCGACAGCTATGGCTACCATTTGCAACATGTCTGCGGAAA
TTGGGTCGACTTCTTGTATCTTCCCCTACTCGGATGCGATCGCCCGCTAT
TTGAGTGCCACTGCGCGCGATCATGTTGTGAAAGCGGCAAACTCAGTCAA
AGACCTTCTACTCACCGCAGATGAGGGCTCCGAGGAGTACTACGACGAAA
TCATCAAGATCGATTTGGACACTCTGGAGCCGCATGTTAACGGTCCTTTC
ACACCGGATCTAGCTCATCCCATCTCGAAGCTGTCTACTGCGGTCGCTGA
GAGCGATTGGCCTGTGAACCTAAGCCACGCCATGGTGGGTAGCTGTACCA
ACAGCTCCTATGAGGATTTGGACAAGGCTCGGCAGCTGGTTAACCAAGCC
CGGGCGGCCGGAATAACAAAGTTCAAGACTCCTTTCTTGGTTTCACCAGG
TAGCGAAAGAATTCGGGCTACCGCCGAGGAGGCTGGTATCCTGCAGGATC
TCGAGGACGCTGGTGCTATGATCCTCAGCAGCTCTTGCGGACCGTGTGTC
GGGTCGTGGGACCGCAAGGACGTGGATGTCCGCGGAAAAGAGAAGAACTC
GGTGATCTCCAGCTACAACCGTAACTTTGTGGGGCGCCACGACAGCAATC
CGGCCACGCACTCATTCGTCACGTCGCCGGAGCTAGTCACAGCCTTTGCT
TATGCTGGTCGCCTGGACTTTAACCCTGTCACTGACAGTATCTCTGCGGA
AGGATCTCAGCCACTGCGGCTTACGCCTCCTGTAGGTCAGGAATTGCCAG
AATCATTCAATTCCGGTGCAGATCGCTTTCAAGAGCCTCCGTCAGATGGC
TCATCCTACTCGGTTATTATCGATGAGAAGTCCGACAGGCTACAACTCTT
GAAGCCCTTCCCGGCGTGGAAGCACGGAAATGCAACGGACATGGAGTTGC
TGATGAAGGTAAAGGGCAAGTGTACGACGGATCACATATCCCCGGCTGGC
CCGTGGTACAAATATCGCGGTCATCTGGAGAACATCAGCCACAACATGCT
CACCACCGCAACCAATGCATTCTTAGACAATGACCCGCAAATGCTAGGCC
ATACGACACATCCGCTAACGCGCAAGGTCCAGCTTACTCATGAAGTGGCC
CGAGACTTGAAGCACCGTTCCATTCGTTGGTGCGTGGTTGGAGACAACAA
CTACGGTGAGGGTAGTTCGCGAGAGCATGCCGCACTGGAGCCTCGCTTCC
TCGGTGGCATTGCCATCATAGCCCGGTCTTTCGCTCGTATCCACGAGACG
AATCTGAAGAAACAGGGAATGCTTCCGCTCACATTCGCTGATCCTGCTGA
CTACGACCGAGTGCAGGAGGGAGATCGCATCACTCTGATTGGCGTAGAAG
ATGGAGAGCTGCAACCGGGGAAGAATGTCACCATGCGGGTTACTCCGCGC
CATGGAGACGCCTGGGAGGCTGAGTTGTGCCACAGCTATCATGCCGGACA
GCTCCCGTGGCTCCGGGCTGGTAGTGCCTTGAACCATATCAAGGCTACTG
TACGCAGCTGAATGCGACAACCGTTCCAGGTAACCCAGTCAGTACACCTC
GATCTCAGTCCAGAGCATTTGGTGCTGATTTTGGCCGTTGAACAGATTCT
AGGCGTTCACTACCCCAAACAGATTCGGGCCATCGAAGCGATTAAGCAGG
GATCAAAGCGCCCGCTCACGCTTGCTGAAAAGACACTATACAGTCACTTA
CTGGACACGGATAGCGGTCGTTGGAACATTGATAAGATTACGCGGGGAAA
GACCATTTTGGAGCTACGCCCTGATCGTGTTGCCTGCCATGATGCGACTG
CAACAATGGCTTTACTACAGTTTATCAGCGCTGGCCTCCCGCGTGTGATG
GTACCGACAACAGTGCACAGCGATCATCTTATCATCTCAGAGAATGGCGC
GGAGAAAGATATGCAGCGTGCGACCACAGAACACGCAGAGGTATATGATT
TCTTGAGTAGCGCTTCGAAGAAGTACGGGATCGGCTTCTGGAAGCCTGGA
TCTGGAATCATCCATACTGTCATTTTTGAGAACTACGCGATGCCTGGAGG
TTTGATTATCGGTACGGATTCTCATACGCCCAATGCAGGTGGGATGGGCA
TGCTTGGAATTGGCGTTGGCGGAGCCGATGCTGTTGACGCAATGTCGGGG
ATGGCTTGGGAGTTGGTTGCGCCGAAAGTCATTGGAGTCGAACTTACGGG
CGAGCTTCAAGGTTGGGCGTCAACAAAAGATATTATCTGTAAACTGGCAG
GAATACTCAGTGTATCGGGCGGGAAAGGTCGCATCATTGAATTCTTCGGT
CCTGGTACGAAGACCCTGGGCGCGACAGCTATGGCTACCATTTGCAACAT
GTCTGCGGAAATTGGGTCGACTTCTTGTATCTTCCCCTACTCGGATGCGA
TCGCCCGCTATTTGAGTGCCACTGCGCGCGATCATGTTGTGAAAGCGGCA
AACTCAGTCAAAGACCTTCTACTCACCGCAGATGAGGGCTCCGAGGAGTA
CTACGACGAAATCATCAAGATCGATTTGGACACTCTGGAGCCGCATGTTA
ACGGTCCTTTCACACCGGATCTAGCTCATCCCATCTCGAAGCTGTCTACT
GCGGTCGCTGAGAGCGATTGGCCTGTGAACCTAAGCCACGCCATGGTGGG
TAGCTGTACCAACAGCTCCTATGAGGATTTGGACAAGGCTCGGCAGCTGG
TTAACCAAGCCCGGGCGGCCGGAATAACAAAGTTCAAGACTCCTTTCTTG
GTTTCACCAGGTAGCGAAAGAATTCGGGCTACCGCCGAGGAGGCTGGTAT
CCTGCAGGATCTCGAGGACGCTGGTGCTATGATCCTCAGCAGCTCTTGCG
GACCGTGTGTCGGGTCGTGGGACCGCAAGGACGTGGATGTCCGCGGAAAA
GAGAAGAACTCGGTGATCTCCAGCTACAACCGTAACTTTGTGGGGCGCCA
CGACAGCAATCCGGCCACGCACTCATTCGTCACGTCGCCGGAGCTAGTCA
CAGCCTTTGCTTATGCTGGTCGCCTGGACTTTAACCCTGTCACTGACAGT
ATCTCTGCGGAAGGATCTCAGCCACTGCGGCTTACGCCTCCTGTAGGTCA
GGAATTGCCAGAATCATTCAATTCCGGTGCAGATCGCTTTCAAGAGCCTC
CGTCAGATGGCTCATCCTACTCGGTTATTATCGATGAGAAGTCCGACAGG
CTACAACTCTTGAAGCCCTTCCCGGCGTGGAAGCACGGAAATGCAACGGA
CATGGAGTTGCTGATGAAGGTAAAGGGCAAGTGTACGACGGATCACATAT
CCCCGGCTGGCCCGTGGTACAAATATCGCGGTCATCTGGAGAACATCAGC
CACAACATGCTCACCACCGCAACCAATGCATTCTTAGACAATGACCCGCA
AATGCTAGGCCATACGACACATCCGCTAACGCGCAAGGTCCAGCTTACTC
ATGAAGTGGCCCGAGACTTGAAGCACCGTTCCATTCGTTGGTGCGTGGTT
GGAGACAACAACTACGGTGAGGGTAGTTCGCGAGAGCATGCCGCACTGGA
GCCTCGCTTCCTCGGTGGCATTGCCATCATAGCCCGGTCTTTCGCTCGTA
TCCACGAGACGAATCTGAAGAAACAGGGAATGCTTCCGCTCACATTCGCT
GATCCTGCTGACTACGACCGAGTGCAGGAGGGAGATCGCATCACTCTGAT
TGGCGTAGAAGATGGAGAGCTGCAACCGGGGAAGAATGTCACCATGCGGG
TTACTCCGCGCCATGGAGACGCCTGGGAGGCTGAGTTGTGCCACAGCTAT
CATGCCGGACAGCTCCCGTGGCTCCGGGCTGGTAGTGCCTTGAACCATAT
CAAGGCTACTGTACGCAGCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006099tricarboxylic acid cycle
Vocabulary: Molecular Function
TermDefinition
GO:00515394 iron, 4 sulfur cluster binding
GO:0003994aconitate hydratase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_13500CAN33_13500Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_13500-T1.exon1CAN33_13500-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_13500-T1.exon2CAN33_13500-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_13500-T1.cdsCAN33_13500-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_13500-T1CAN33_13500-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036008
DBxrefInterPro:IPR018136
DBxrefInterPro:IPR006248
DBxrefInterPro:IPR015931
DBxrefInterPro:IPR015928
DBxrefInterPro:IPR000573
DBxrefInterPro:IPR015932
DBxrefInterPro:IPR001030
DBxrefPFAM:PF00694
DBxrefPFAM:PF00330
Productaconitate hydratase mitochondrial
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000010.1supercontigNKJJ01000010.1:873779..876194 +
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