|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000010.1:924870..925780- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_13580-T1 ID=CAN33_13580-T1|Name=CAN33_13580-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=911bp|location=Sequence derived from alignment at NKJJ01000010.1:924870..925780- (Aspergillus niger FDAARGOS_311)
ATGATTGAACCGTTTCAGGTGGGCTCTTGCCAGGGTTGACGATGCATCGT
CGTGAGGGGAATGCCTAACTAATCGCTTAGACTACCTTTGCGGTCCCGAT
GACCTGCGAGGGCTGCGTCAAGGATGTTTCTGCATCGCTGAAGAAGTTGG
AGGGTAGGCGCATCCACATTGCAACCCTGTGCTCGAGCTGACCGGTCAGG
CATCAACATGGTCGAGGCAAACCTTAAGGACCAGCTAGTCTTCATCGAGG
GCACGGCACCACCCAGCTCGATTGTCTCCGCTATCCAAGCTACGGGACGG
GATGCCATTCTACGAGGCAGTGGCACCTCCAACAGTATGTCTATCACCTG
CCTATCCCAGGCAGTACACCGAGGCTGATGGCACCTTTTGCAGGTTCCGC
GGTGTGTATCTTGGAAACCCACTCGAATAGCGTCTCCAACAAGATTCGCG
GTCTGGCGCGCATGGTCCAGGTGTCCTCCAACATGACCCTGGTCGACCTG
ACGATCAACGGCCTTACTCCCGGCAAGTATTATGCCACGGTACGCGACAC
AGGAGATATCTCGCAGGGTGCTGGATCCACCGGAGGCATTTGGGAGGCCG
TCAAGGCTAAAGTGCTGGGGTCGGAGCCAGTCAAGGAACCCCGCGGCATT
TTTGGGTCGGTCGAAGTGAACGACAAGGGCCGGGGCAATGTATTTTTGGA
TCGCCCGGTAGCGGTGTGGGAGATGATTGGGCGCAGTATGGTAGTGTCGA
AGAGCCAGGAGGGGCCCTTTCGACAGGAAGACCCTGACACTCTAGTGGGA
GTGATCGCTCGAAGCGCGGGGGTGTGGGATAATGACAAGATGGTGTGTTC
CTGCTCTGGAAAGAATGTGTGGCAGGAGCGGCAGGAGCAGGTGGCCCAGG
GCATGGCCTAG back to topCoding sequence (CDS) from alignment at NKJJ01000010.1:924870..925780- >CAN33_13580-T1 ID=CAN33_13580-T1|Name=CAN33_13580-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2976bp|location=Sequence derived from alignment at NKJJ01000010.1:924870..925780- (Aspergillus niger FDAARGOS_311)
GTTCCGCGGTGTGTATCTTGGAAACCCACTCGAATAGCGTCTCCAACAAG
ATTCGCGGTCTGGCGCGCATGGTCCAGGTGTCCTCCAACATGACCCTGGT
CGACCTGACGATCAACGGCCTTACTCCCGGCAAGTATTATGCCACGGTAC
GCGACACAGGAGATATCTCGCAGGGTGCTGGATCCACCGGAGGCATTTGG
GAGGCCGTCAAGGCTAAAGTGCTGGGGTCGGAGCCAGTCAAGGAACCCCG
CGGCATTTTTGGGTCGGTCGAAGTGAACGACAAGGGCCGGGGCAATGTAT
TTTTGGATCGCCCGGTAGCGGTGTGGGAGATGATTGGGCGCAGTATGGTA
GTGTCGAAGAGCCAGGAGGGGCCCTTTCGACAGGAAGACCCTGACACTCT
AGTGGGAGTGATCGCTCGAAGCGCGGGGGTGTGGGATAATGACAAGATGG
TGTGTTCCTGCTCTGGAAAGAATGTGTGGCAGGAGCGGCAGGAGCAGGTG
GCCCAGGGCATGGCCTAGGCATCAACATGGTCGAGGCAAACCTTAAGGAC
CAGCTAGTCTTCATCGAGGGCACGGCACCACCCAGCTCGATTGTCTCCGC
TATCCAAGCTACGGGACGGGATGCCATTCTACGAGGCAGTGGCACCTCCA
ACAACTACCTTTGCGGTCCCGATGACCTGCGAGGGCTGCGTCAAGGATGT
TTCTGCATCGCTGAAGAAGTTGGAGGATGATTGAACCGTTTCAGGTTCCG
CGGTGTGTATCTTGGAAACCCACTCGAATAGCGTCTCCAACAAGATTCGC
GGTCTGGCGCGCATGGTCCAGGTGTCCTCCAACATGACCCTGGTCGACCT
GACGATCAACGGCCTTACTCCCGGCAAGTATTATGCCACGGTACGCGACA
CAGGAGATATCTCGCAGGGTGCTGGATCCACCGGAGGCATTTGGGAGGCC
GTCAAGGCTAAAGTGCTGGGGTCGGAGCCAGTCAAGGAACCCCGCGGCAT
TTTTGGGTCGGTCGAAGTGAACGACAAGGGCCGGGGCAATGTATTTTTGG
ATCGCCCGGTAGCGGTGTGGGAGATGATTGGGCGCAGTATGGTAGTGTCG
AAGAGCCAGGAGGGGCCCTTTCGACAGGAAGACCCTGACACTCTAGTGGG
AGTGATCGCTCGAAGCGCGGGGGTGTGGGATAATGACAAGATGGTGTGTT
CCTGCTCTGGAAAGAATGTGTGGCAGGAGCGGCAGGAGCAGGTGGCCCAG
GGCATGGCCTAGGCATCAACATGGTCGAGGCAAACCTTAAGGACCAGCTA
GTCTTCATCGAGGGCACGGCACCACCCAGCTCGATTGTCTCCGCTATCCA
AGCTACGGGACGGGATGCCATTCTACGAGGCAGTGGCACCTCCAACAACT
ACCTTTGCGGTCCCGATGACCTGCGAGGGCTGCGTCAAGGATGTTTCTGC
ATCGCTGAAGAAGTTGGAGGATGATTGAACCGTTTCAGGTTCCGCGGTGT
GTATCTTGGAAACCCACTCGAATAGCGTCTCCAACAAGATTCGCGGTCTG
GCGCGCATGGTCCAGGTGTCCTCCAACATGACCCTGGTCGACCTGACGAT
CAACGGCCTTACTCCCGGCAAGTATTATGCCACGGTACGCGACACAGGAG
ATATCTCGCAGGGTGCTGGATCCACCGGAGGCATTTGGGAGGCCGTCAAG
GCTAAAGTGCTGGGGTCGGAGCCAGTCAAGGAACCCCGCGGCATTTTTGG
GTCGGTCGAAGTGAACGACAAGGGCCGGGGCAATGTATTTTTGGATCGCC
CGGTAGCGGTGTGGGAGATGATTGGGCGCAGTATGGTAGTGTCGAAGAGC
CAGGAGGGGCCCTTTCGACAGGAAGACCCTGACACTCTAGTGGGAGTGAT
CGCTCGAAGCGCGGGGGTGTGGGATAATGACAAGATGGTGTGTTCCTGCT
CTGGAAAGAATGTGTGGCAGGAGCGGCAGGAGCAGGTGGCCCAGGGCATG
GCCTAGGCATCAACATGGTCGAGGCAAACCTTAAGGACCAGCTAGTCTTC
ATCGAGGGCACGGCACCACCCAGCTCGATTGTCTCCGCTATCCAAGCTAC
GGGACGGGATGCCATTCTACGAGGCAGTGGCACCTCCAACAACTACCTTT
GCGGTCCCGATGACCTGCGAGGGCTGCGTCAAGGATGTTTCTGCATCGCT
GAAGAAGTTGGAGGATGATTGAACCGTTTCAGGTTCCGCGGTGTGTATCT
TGGAAACCCACTCGAATAGCGTCTCCAACAAGATTCGCGGTCTGGCGCGC
ATGGTCCAGGTGTCCTCCAACATGACCCTGGTCGACCTGACGATCAACGG
CCTTACTCCCGGCAAGTATTATGCCACGGTACGCGACACAGGAGATATCT
CGCAGGGTGCTGGATCCACCGGAGGCATTTGGGAGGCCGTCAAGGCTAAA
GTGCTGGGGTCGGAGCCAGTCAAGGAACCCCGCGGCATTTTTGGGTCGGT
CGAAGTGAACGACAAGGGCCGGGGCAATGTATTTTTGGATCGCCCGGTAG
CGGTGTGGGAGATGATTGGGCGCAGTATGGTAGTGTCGAAGAGCCAGGAG
GGGCCCTTTCGACAGGAAGACCCTGACACTCTAGTGGGAGTGATCGCTCG
AAGCGCGGGGGTGTGGGATAATGACAAGATGGTGTGTTCCTGCTCTGGAA
AGAATGTGTGGCAGGAGCGGCAGGAGCAGGTGGCCCAGGGCATGGCCTAG
GCATCAACATGGTCGAGGCAAACCTTAAGGACCAGCTAGTCTTCATCGAG
GGCACGGCACCACCCAGCTCGATTGTCTCCGCTATCCAAGCTACGGGACG
GGATGCCATTCTACGAGGCAGTGGCACCTCCAACAACTACCTTTGCGGTC
CCGATGACCTGCGAGGGCTGCGTCAAGGATGTTTCTGCATCGCTGAAGAA
GTTGGAGGATGATTGAACCGTTTCAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006801 | superoxide metabolic process |
| GO:0030001 | metal ion transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0046872 | metal ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036163 |
| DBxref | InterPro:IPR036423 |
| DBxref | InterPro:IPR001424 |
| DBxref | InterPro:IPR006121 |
| DBxref | PFAM:PF00080 |
| DBxref | PFAM:PF00403 |
| Product | Copper/zinc superoxide dismutase (SODC) family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000010.1 | supercontig | NKJJ01000010.1:924870..925780 - |
|
