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CAN33_1365-T1, CAN33_1365-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_1365-T1
Unique NameCAN33_1365-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000004.1:787234..788113+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_1365-T1 ID=CAN33_1365-T1|Name=CAN33_1365-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=880bp|location=Sequence derived from alignment at NKJJ01000004.1:787234..788113+ (Aspergillus niger FDAARGOS_311)
ATGGCGTCTTCTTCCCCGATCCTGCAGCAGCTGGGCTGCTTCCGGTCCCT
CCTCCTGAAGCCCCAGTCCCTGTCGTCCACCGTCAACAACCAGATCGGTC
GCCGTGCGCTCAGCACCGTCTACTCCGCGAAGCCTGAGCCCAAGCCTCTC
CCTAAGAACCTGCCGGAGCAGTTCCTTCGTCAATTACCGCTTCGCATGCG
GCCGAATCCTGGTATGGACTGAACTAACTCATTTTTTGCTTGGACTTGCG
TCCGTCTCGAGTTACCGATGCTTGCTTTACCCGGATCATATATCTAACAT
GTTTAATGAATGATATGCAGAGCGCAAAGAACGCAAGATCCCTCCTCCGC
CGCCGGCCCCTCAGTGCAAGGACCCCGTGAACGCCGTGCAGGAGGCCCAA
TTGGCGCAGCTGGACCCTACAGGCGAGCGCCGCGCTCTTTTCGACTACAG
ACGGAGTCCTCGCAGTGTCAAGGTCGGAGATGTTTTGCGGGTGACGTTCA
AGAACGGAGATCCGTTCTCCGGAGTGTGTTTGAGCATTCGGTTGCGCGGC
ATTGATACGTCGTTCTTGTTGCGGAACCAGTTGACGAGAGTTGGAGTCGA
GATGTCCATCAAGGTGTTCAGTCCTAATGTTGAGAGTGTGGAGATTGTGC
AGAGGGCGGAGAAGAGAAAGAGACGCGCGAGGTTGTATTACATGAGGTGC
GTATTAATTTCTTTGTGGATAGTGGATTGTATTGGATGGGAAGGCTAACG
AGATCTCCTTCGGGTTTATAGGAAGCCCAAGCACGACATGGGCAGCGTCG
AGAACCTCGTTGCGAACTACCTCCGGCAGAAGAGATCGCTTACCGGCAAG
AGGGGCGGTGGCCAGACGAAGAGACGGTAG
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Coding sequence (CDS) from alignment at NKJJ01000004.1:787234..788113+

>CAN33_1365-T1 ID=CAN33_1365-T1|Name=CAN33_1365-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2088bp|location=Sequence derived from alignment at NKJJ01000004.1:787234..788113+ (Aspergillus niger FDAARGOS_311)
ATGGCGTCTTCTTCCCCGATCCTGCAGCAGCTGGGCTGCTTCCGGTCCCT
CCTCCTGAAGCCCCAGTCCCTGTCGTCCACCGTCAACAACCAGATCGGTC
GCCGTGCGCTCAGCACCGTCTACTCCGCGAAGCCTGAGCCCAAGCCTCTC
CCTAAGAACCTGCCGGAGCAGTTCCTTCGTCAATTACCGCTTCGCATGCG
GCCGAATCCTGAGCGCAAAGAACGCAAGATCCCTCCTCCGCCGCCGGCCC
CTCAGTGCAAGGACCCCGTGAACGCCGTGCAGGAGGCCCAATTGGCGCAG
CTGGACCCTACAGGCGAGCGCCGCGCTCTTTTCGACTACAGACGGAGTCC
TCGCAGTGTCAAGGTCGGAGATGTTTTGCGGGTGACGTTCAAGAACGGAG
ATCCGTTCTCCGGAGTGTGTTTGAGCATTCGGTTGCGCGGCATTGATACG
TCGTTCTTGTTGCGGAACCAGTTGACGAGAGTTGGAGTCGAGATGTCCAT
CAAGGTGTTCAGTCCTAATGTTGAGAGTGTGGAGATTGTGCAGAGGGCGG
AGAAGAGAAAGAGACGCGCGAGGTTGTATTACATGAGGAAGCCCAAGCAC
GACATGGGCAGCGTCGAGAACCTCGTTGCGAACTACCTCCGGCAGAAGAG
ATCGCTTACCGGCAAGAGGGGCGGTGGCCAGACGAAGAGACGGTAGATGG
CGTCTTCTTCCCCGATCCTGCAGCAGCTGGGCTGCTTCCGGTCCCTCCTC
CTGAAGCCCCAGTCCCTGTCGTCCACCGTCAACAACCAGATCGGTCGCCG
TGCGCTCAGCACCGTCTACTCCGCGAAGCCTGAGCCCAAGCCTCTCCCTA
AGAACCTGCCGGAGCAGTTCCTTCGTCAATTACCGCTTCGCATGCGGCCG
AATCCTGAGCGCAAAGAACGCAAGATCCCTCCTCCGCCGCCGGCCCCTCA
GTGCAAGGACCCCGTGAACGCCGTGCAGGAGGCCCAATTGGCGCAGCTGG
ACCCTACAGGCGAGCGCCGCGCTCTTTTCGACTACAGACGGAGTCCTCGC
AGTGTCAAGGTCGGAGATGTTTTGCGGGTGACGTTCAAGAACGGAGATCC
GTTCTCCGGAGTGTGTTTGAGCATTCGGTTGCGCGGCATTGATACGTCGT
TCTTGTTGCGGAACCAGTTGACGAGAGTTGGAGTCGAGATGTCCATCAAG
GTGTTCAGTCCTAATGTTGAGAGTGTGGAGATTGTGCAGAGGGCGGAGAA
GAGAAAGAGACGCGCGAGGTTGTATTACATGAGGAAGCCCAAGCACGACA
TGGGCAGCGTCGAGAACCTCGTTGCGAACTACCTCCGGCAGAAGAGATCG
CTTACCGGCAAGAGGGGCGGTGGCCAGACGAAGAGACGGTAGATGGCGTC
TTCTTCCCCGATCCTGCAGCAGCTGGGCTGCTTCCGGTCCCTCCTCCTGA
AGCCCCAGTCCCTGTCGTCCACCGTCAACAACCAGATCGGTCGCCGTGCG
CTCAGCACCGTCTACTCCGCGAAGCCTGAGCCCAAGCCTCTCCCTAAGAA
CCTGCCGGAGCAGTTCCTTCGTCAATTACCGCTTCGCATGCGGCCGAATC
CTGAGCGCAAAGAACGCAAGATCCCTCCTCCGCCGCCGGCCCCTCAGTGC
AAGGACCCCGTGAACGCCGTGCAGGAGGCCCAATTGGCGCAGCTGGACCC
TACAGGCGAGCGCCGCGCTCTTTTCGACTACAGACGGAGTCCTCGCAGTG
TCAAGGTCGGAGATGTTTTGCGGGTGACGTTCAAGAACGGAGATCCGTTC
TCCGGAGTGTGTTTGAGCATTCGGTTGCGCGGCATTGATACGTCGTTCTT
GTTGCGGAACCAGTTGACGAGAGTTGGAGTCGAGATGTCCATCAAGGTGT
TCAGTCCTAATGTTGAGAGTGTGGAGATTGTGCAGAGGGCGGAGAAGAGA
AAGAGACGCGCGAGGTTGTATTACATGAGGAAGCCCAAGCACGACATGGG
CAGCGTCGAGAACCTCGTTGCGAACTACCTCCGGCAGAAGAGATCGCTTA
CCGGCAAGAGGGGCGGTGGCCAGACGAAGAGACGGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_1365CAN33_1365Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_1365-T1.exon1CAN33_1365-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_1365-T1.exon2CAN33_1365-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_1365-T1.exon3CAN33_1365-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_1365-T1.cdsCAN33_1365-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_1365-T1CAN33_1365-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
NoteBUSCO:EOG09264I6B
DBxrefInterPro:IPR008991
DBxrefInterPro:IPR038657
DBxrefInterPro:IPR001857
DBxrefPFAM:PF01245
ProductRibosomal protein L19 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000004.1supercontigNKJJ01000004.1:787234..788113 +
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