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CAN33_13740-T1, CAN33_13740-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_13740-T1
Unique NameCAN33_13740-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000010.1:1025302..1026228-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_13740-T1 ID=CAN33_13740-T1|Name=CAN33_13740-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=927bp|location=Sequence derived from alignment at NKJJ01000010.1:1025302..1026228- (Aspergillus niger FDAARGOS_311)
ATGTCTGAACGCTCCACCGTCCACGTCGAGGGCATTGCCTCCGCTACCAC
CGACAAGGAGGTCCAAGATTTCTTTAGCTTCTGGTATGCAATGCACGCAT
TTCAAACCATCCCTTGCATGAACTGCACGGCTGACAAGCTTACAGCGGAA
AGATCACCCACATTTCCGTGACCCCCGTTTCAGGCGAAGCTGATGCCCAA
AAGTCGGCCACTGTTACTTTCGAAAAGGAAGCGTAAGTTACCCCGCACCT
TACCCGTCATTGTTGCCAAATGACACCATCTCGCCCACTCTCCATCAAAG
CTAACCATGATTCTCTGCGATAGTGCTGCTAAGACCGCTCTTCTCCTCGA
CAACACCCAGCTTGGTTCCTCTCTCGTGCACGTCAAGGCTGCCCAGAGCC
TCGACGACATCGCCGGCGAGCAGGCCGCCAGCGCCGGACAAGCCAAGGAC
GAGTACAACCACGACCTCGAGCAGGAGGACAAGCCCCGTTCTCGCATTGT
AGCTGAGTACCTGGCCCACGGCTACACCCTCAGCGACAATGCCATCCAGA
AGGCCATTGCCCTGGACAACAAGCACGGGTTCTCGTCGCGCTTCACCAGC
GCTCTGTCTTCCTTCGACCAGAAGTACCATGCCACGGACCGTGCTCGCGG
TCTGGACGAGAACTACAAGCTCAGCGACAAGGCGACCACTGGCTGGCGTA
GTCTGAACCACTACTTCGAGAAGGCTCTCGACACTCCCTCGGGCAGGAAG
TTGCGGGACTTTTACTCCCAGACCGATAAGCAGGTGCGCGATATTCACAA
CGAGGCTCGCAGACTTGCGGATCTGAAGAGCGGCAAGTCTACTACTGAGG
GTGGTGAGGCTCCTGCTCCTAGCACGGCGCCTGCTACTCAGCCGGCGGGT
ACTGCTGCTCCTGCTGAGCAGGCGTAA
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Coding sequence (CDS) from alignment at NKJJ01000010.1:1025302..1026228-

>CAN33_13740-T1 ID=CAN33_13740-T1|Name=CAN33_13740-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2322bp|location=Sequence derived from alignment at NKJJ01000010.1:1025302..1026228- (Aspergillus niger FDAARGOS_311)
TGCTGCTAAGACCGCTCTTCTCCTCGACAACACCCAGCTTGGTTCCTCTC
TCGTGCACGTCAAGGCTGCCCAGAGCCTCGACGACATCGCCGGCGAGCAG
GCCGCCAGCGCCGGACAAGCCAAGGACGAGTACAACCACGACCTCGAGCA
GGAGGACAAGCCCCGTTCTCGCATTGTAGCTGAGTACCTGGCCCACGGCT
ACACCCTCAGCGACAATGCCATCCAGAAGGCCATTGCCCTGGACAACAAG
CACGGGTTCTCGTCGCGCTTCACCAGCGCTCTGTCTTCCTTCGACCAGAA
GTACCATGCCACGGACCGTGCTCGCGGTCTGGACGAGAACTACAAGCTCA
GCGACAAGGCGACCACTGGCTGGCGTAGTCTGAACCACTACTTCGAGAAG
GCTCTCGACACTCCCTCGGGCAGGAAGTTGCGGGACTTTTACTCCCAGAC
CGATAAGCAGGTGCGCGATATTCACAACGAGGCTCGCAGACTTGCGGATC
TGAAGAGCGGCAAGTCTACTACTGAGGGTGGTGAGGCTCCTGCTCCTAGC
ACGGCGCCTGCTACTCAGCCGGCGGGTACTGCTGCTCCTGCTGAGCAGGC
GTAACGGAAAGATCACCCACATTTCCGTGACCCCCGTTTCAGGCGAAGCT
GATGCCCAAAAGTCGGCCACTGTTACTTTCGAAAAGGAAGCATGTCTGAA
CGCTCCACCGTCCACGTCGAGGGCATTGCCTCCGCTACCACCGACAAGGA
GGTCCAAGATTTCTTTAGCTTCTGTGCTGCTAAGACCGCTCTTCTCCTCG
ACAACACCCAGCTTGGTTCCTCTCTCGTGCACGTCAAGGCTGCCCAGAGC
CTCGACGACATCGCCGGCGAGCAGGCCGCCAGCGCCGGACAAGCCAAGGA
CGAGTACAACCACGACCTCGAGCAGGAGGACAAGCCCCGTTCTCGCATTG
TAGCTGAGTACCTGGCCCACGGCTACACCCTCAGCGACAATGCCATCCAG
AAGGCCATTGCCCTGGACAACAAGCACGGGTTCTCGTCGCGCTTCACCAG
CGCTCTGTCTTCCTTCGACCAGAAGTACCATGCCACGGACCGTGCTCGCG
GTCTGGACGAGAACTACAAGCTCAGCGACAAGGCGACCACTGGCTGGCGT
AGTCTGAACCACTACTTCGAGAAGGCTCTCGACACTCCCTCGGGCAGGAA
GTTGCGGGACTTTTACTCCCAGACCGATAAGCAGGTGCGCGATATTCACA
ACGAGGCTCGCAGACTTGCGGATCTGAAGAGCGGCAAGTCTACTACTGAG
GGTGGTGAGGCTCCTGCTCCTAGCACGGCGCCTGCTACTCAGCCGGCGGG
TACTGCTGCTCCTGCTGAGCAGGCGTAACGGAAAGATCACCCACATTTCC
GTGACCCCCGTTTCAGGCGAAGCTGATGCCCAAAAGTCGGCCACTGTTAC
TTTCGAAAAGGAAGCATGTCTGAACGCTCCACCGTCCACGTCGAGGGCAT
TGCCTCCGCTACCACCGACAAGGAGGTCCAAGATTTCTTTAGCTTCTGTG
CTGCTAAGACCGCTCTTCTCCTCGACAACACCCAGCTTGGTTCCTCTCTC
GTGCACGTCAAGGCTGCCCAGAGCCTCGACGACATCGCCGGCGAGCAGGC
CGCCAGCGCCGGACAAGCCAAGGACGAGTACAACCACGACCTCGAGCAGG
AGGACAAGCCCCGTTCTCGCATTGTAGCTGAGTACCTGGCCCACGGCTAC
ACCCTCAGCGACAATGCCATCCAGAAGGCCATTGCCCTGGACAACAAGCA
CGGGTTCTCGTCGCGCTTCACCAGCGCTCTGTCTTCCTTCGACCAGAAGT
ACCATGCCACGGACCGTGCTCGCGGTCTGGACGAGAACTACAAGCTCAGC
GACAAGGCGACCACTGGCTGGCGTAGTCTGAACCACTACTTCGAGAAGGC
TCTCGACACTCCCTCGGGCAGGAAGTTGCGGGACTTTTACTCCCAGACCG
ATAAGCAGGTGCGCGATATTCACAACGAGGCTCGCAGACTTGCGGATCTG
AAGAGCGGCAAGTCTACTACTGAGGGTGGTGAGGCTCCTGCTCCTAGCAC
GGCGCCTGCTACTCAGCCGGCGGGTACTGCTGCTCCTGCTGAGCAGGCGT
AACGGAAAGATCACCCACATTTCCGTGACCCCCGTTTCAGGCGAAGCTGA
TGCCCAAAAGTCGGCCACTGTTACTTTCGAAAAGGAAGCATGTCTGAACG
CTCCACCGTCCACGTCGAGGGCATTGCCTCCGCTACCACCGACAAGGAGG
TCCAAGATTTCTTTAGCTTCTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_13740CAN33_13740Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_13740-T1CAN33_13740-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_13740-T1.cdsCAN33_13740-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_13740-T1.exon3CAN33_13740-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_13740-T1.exon2CAN33_13740-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_13740-T1.exon1CAN33_13740-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefPFAM:PF00076
DBxrefPFAM:PF14605
ProductRNA recognition motif family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000010.1supercontigNKJJ01000010.1:1025302..1026228 -
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