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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000010.1:1037940..1039038- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_13760-T1 ID=CAN33_13760-T1|Name=CAN33_13760-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1099bp|location=Sequence derived from alignment at NKJJ01000010.1:1037940..1039038- (Aspergillus niger FDAARGOS_311)
ATGGCTGACGAGCACTACGTGAGTTTTCCGATAACTAAAGACATGTTGAA
GAGGACTAGGAAGAGTTTGAACTAACGTTCTTTTGCCTACAGAACGCCGA
GGAGGCTGCCGGTACGTTTGAAATTTTTTTGCCTGAACCACCCTTTCCTG
CCCTGGACCCCGGAAACAGAGACGAATTCGCGTTGTGGGAAACGGTATTT
TGGCTGGATATACGATATGATATGGACATAATTCGATGATGCGACACTTG
GAAATTTTTGAGGAAGGGATGGGGGGGCAACGGACCGAATTCTCTGTCGA
CGTTTCTATTCTTGCTTTTGCCACACCAACTACGAGAACCACGCAGCAGT
GATTGAAGGGAACACAAGGCGCTGACGTATCCGGGAAACAGAGATCAAGA
AGAGAAGACAGTTCCGCAAGTTCACCTACCGCGGTATTGACCTCGACCAG
TACGTTTCACCATGAATATCTATCATACCCACACTGCACTCCGAACCGAC
GGCCTCGACTCCGAACGAGCGATATCAGCAATATGGACATTTCTGGATAT
TTGCGGAATATCCTCGTGGGAGTCGACGGCCGAGGGAAGGAAATATGACA
ATCTATCGAAAAGACCGGCGGGAAATATGTGGAATGGTATCTGACCTGTT
TGTCTGCACAGGCTCCTTGACCTCTCCTCCGAACAGCTCCGTGATGTCGT
TCACGCCCGCGCTCGTCGTCGCTTCAACCGCGGTCTGAAGCGCAAGCCCA
TGGGTCTCATCAAGAAGCTCCGCAAGGCCAAGCAGGAGGCTCGCCCCAAC
GAGAAGCCCGACCTCGTCAAGACCCACCTCCGTGACATGATCGTTGTCCC
CGAGATGATCGGCAGCGTCATCGGTATCTACTCCGGTAAGGAGTTCAACC
AGATCGAAGTCAAGCCCGAGATGGTTGGCCACTACCTGGGTGAATTCTCT
ATCTCCTAGTACGTACCCCTATACCCATATCCCCCGCGAGCGAATCCAAA
TGAATATGGTATGTCTAACAACCACACAGCAAGCCCGTCAAGCACGGTCG
TCCCGGTATCGGTGCCACCCACTCTTCCCGTTTCATTCCCCTCAAGTAA back to topCoding sequence (CDS) from alignment at NKJJ01000010.1:1037940..1039038- >CAN33_13760-T1 ID=CAN33_13760-T1|Name=CAN33_13760-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2310bp|location=Sequence derived from alignment at NKJJ01000010.1:1037940..1039038- (Aspergillus niger FDAARGOS_311)
CAAGCCCGTCAAGCACGGTCGTCCCGGTATCGGTGCCACCCACTCTTCCC
GTTTCATTCCCCTCAAGTAAGCTCCTTGACCTCTCCTCCGAACAGCTCCG
TGATGTCGTTCACGCCCGCGCTCGTCGTCGCTTCAACCGCGGTCTGAAGC
GCAAGCCCATGGGTCTCATCAAGAAGCTCCGCAAGGCCAAGCAGGAGGCT
CGCCCCAACGAGAAGCCCGACCTCGTCAAGACCCACCTCCGTGACATGAT
CGTTGTCCCCGAGATGATCGGCAGCGTCATCGGTATCTACTCCGGTAAGG
AGTTCAACCAGATCGAAGTCAAGCCCGAGATGGTTGGCCACTACCTGGGT
GAATTCTCTATCTCCTAAGATCAAGAAGAGAAGACAGTTCCGCAAGTTCA
CCTACCGCGGTATTGACCTCGACCAAACGCCGAGGAGGCTGCCGATGGCT
GACGAGCACTACCAAGCCCGTCAAGCACGGTCGTCCCGGTATCGGTGCCA
CCCACTCTTCCCGTTTCATTCCCCTCAAGTAAGCTCCTTGACCTCTCCTC
CGAACAGCTCCGTGATGTCGTTCACGCCCGCGCTCGTCGTCGCTTCAACC
GCGGTCTGAAGCGCAAGCCCATGGGTCTCATCAAGAAGCTCCGCAAGGCC
AAGCAGGAGGCTCGCCCCAACGAGAAGCCCGACCTCGTCAAGACCCACCT
CCGTGACATGATCGTTGTCCCCGAGATGATCGGCAGCGTCATCGGTATCT
ACTCCGGTAAGGAGTTCAACCAGATCGAAGTCAAGCCCGAGATGGTTGGC
CACTACCTGGGTGAATTCTCTATCTCCTAAGATCAAGAAGAGAAGACAGT
TCCGCAAGTTCACCTACCGCGGTATTGACCTCGACCAAACGCCGAGGAGG
CTGCCGATGGCTGACGAGCACTACCAAGCCCGTCAAGCACGGTCGTCCCG
GTATCGGTGCCACCCACTCTTCCCGTTTCATTCCCCTCAAGTAAGCTCCT
TGACCTCTCCTCCGAACAGCTCCGTGATGTCGTTCACGCCCGCGCTCGTC
GTCGCTTCAACCGCGGTCTGAAGCGCAAGCCCATGGGTCTCATCAAGAAG
CTCCGCAAGGCCAAGCAGGAGGCTCGCCCCAACGAGAAGCCCGACCTCGT
CAAGACCCACCTCCGTGACATGATCGTTGTCCCCGAGATGATCGGCAGCG
TCATCGGTATCTACTCCGGTAAGGAGTTCAACCAGATCGAAGTCAAGCCC
GAGATGGTTGGCCACTACCTGGGTGAATTCTCTATCTCCTAAGATCAAGA
AGAGAAGACAGTTCCGCAAGTTCACCTACCGCGGTATTGACCTCGACCAA
ACGCCGAGGAGGCTGCCGATGGCTGACGAGCACTACCAAGCCCGTCAAGC
ACGGTCGTCCCGGTATCGGTGCCACCCACTCTTCCCGTTTCATTCCCCTC
AAGTAAGCTCCTTGACCTCTCCTCCGAACAGCTCCGTGATGTCGTTCACG
CCCGCGCTCGTCGTCGCTTCAACCGCGGTCTGAAGCGCAAGCCCATGGGT
CTCATCAAGAAGCTCCGCAAGGCCAAGCAGGAGGCTCGCCCCAACGAGAA
GCCCGACCTCGTCAAGACCCACCTCCGTGACATGATCGTTGTCCCCGAGA
TGATCGGCAGCGTCATCGGTATCTACTCCGGTAAGGAGTTCAACCAGATC
GAAGTCAAGCCCGAGATGGTTGGCCACTACCTGGGTGAATTCTCTATCTC
CTAAGATCAAGAAGAGAAGACAGTTCCGCAAGTTCACCTACCGCGGTATT
GACCTCGACCAAACGCCGAGGAGGCTGCCGATGGCTGACGAGCACTACCA
AGCCCGTCAAGCACGGTCGTCCCGGTATCGGTGCCACCCACTCTTCCCGT
TTCATTCCCCTCAAGTAAGCTCCTTGACCTCTCCTCCGAACAGCTCCGTG
ATGTCGTTCACGCCCGCGCTCGTCGTCGCTTCAACCGCGGTCTGAAGCGC
AAGCCCATGGGTCTCATCAAGAAGCTCCGCAAGGCCAAGCAGGAGGCTCG
CCCCAACGAGAAGCCCGACCTCGTCAAGACCCACCTCCGTGACATGATCG
TTGTCCCCGAGATGATCGGCAGCGTCATCGGTATCTACTCCGGTAAGGAG
TTCAACCAGATCGAAGTCAAGCCCGAGATGGTTGGCCACTACCTGGGTGA
ATTCTCTATCTCCTAAGATCAAGAAGAGAAGACAGTTCCGCAAGTTCACC
TACCGCGGTATTGACCTCGACCAAACGCCGAGGAGGCTGCCGATGGCTGA
CGAGCACTAC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0015935 | small ribosomal subunit |
| GO:0005840 | ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003723 | RNA binding |
| GO:0003735 | structural constituent of ribosome |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092658SK |
| DBxref | InterPro:IPR020934 |
| DBxref | InterPro:IPR005713 |
| DBxref | InterPro:IPR023575 |
| DBxref | InterPro:IPR002222 |
| DBxref | PFAM:PF00203 |
| Product | ribosomal protein S15 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000010.1 | supercontig | NKJJ01000010.1:1037940..1039038 - |
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