|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000004.1:798869..800742+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_1380-T1 ID=CAN33_1380-T1|Name=CAN33_1380-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1874bp|location=Sequence derived from alignment at NKJJ01000004.1:798869..800742+ (Aspergillus niger FDAARGOS_311)
ATGCCTCATCAAAGTCAGGGAATACAGGGATCTGAAAGAGTTATCCCCAC
GAATGAACACTACGCTTATTCAACCCGACCTCCTAGCCAGGATGGGCTTT
CGGCAGCGTCCTATGGTGTCTTGAAGCCCCGACAAATCACCATGGTTGGT
CAGTATTACGATTGAGGATATCTAGACTTTGCACTAATACATATTTCTCC
AAGCTATTGGTGGGGCTATCAATACAGGTTTGACGATCTGCGCAGGGAAC
GCATTGTCCAAGTAAGAGAACAATCCCCGATCGCAGAAGTTACAACTGAC
ATTTGAAACAGGGCCGGTGTAAGTGTGTCACTTCTGAAGTCAACATACTT
TTATTAATATGGTTAGCCTGCATCGATTTTGATCTCCTATACAGGTGTTG
GGGTAGTTGTCTACTTGGTTCTCTGCGCCTTAGGGGAGGTGGCCTCGTGG
TCTCCCGACCCATCCATGACGGACCATGCTACTAGACTCTGTGATCCTGC
GCTTGGGTTCACTTTGGGATGGATGTAAGCCGCCTTGTGTGGGATTGGAA
CACTACATCCAACATTCAATAACCGCAGAATGATAGATACTGGTTCAAGT
TCATGGTCGTCATCCCCAACCAGCTGGCAGCAGGAGAATTGCTGATATCG
TACTGGCAAGACAACGAAGCGAAATACTCGGTTCTTTGGACCACGGCCTT
TTTAGGGGTCATCATCGCTGCCAATTCCATGTGCGGTCGATATTTGGGAA
AGTACGAAGTCATTTTGTCGTTTTTCAAGGTCCTGGTGATGTCAGGGCTT
ATGGCTCTATCTATCGTCCTTGCACTCGGAGGGGGGCCAGATCGCGATAT
GAAAGGCTTCCGCTACTGGAGAGACCCCGGAGCCTTTGCGAATGGTACAG
GAGGCGCCGTGGCAGGTACCGTTCGGGCTATCTGCAGAACAGTCCCTTCC
GCTACGCTCGCCTATCTTGGGAGTGAGTTGATGGGAATGACGATTTTGCG
CACACAAAACCCCCGAAAAGCCGCAGGTCGGGCGATCAAGGTGACTTTCT
ATCGCATCTTGGTTTTCAACATTGTCAATATAACGCTCTTAGGGATGCTC
GTTCCGCACGACACCCACATGCTGGCATTTTCCCACAATGCGCCCCAGCA
TCGGACGGCCTCGGCTTTCGTAGCTGTTGCTCAATCAGCCGGGCCTTCGG
TAATTCCGCACATCCTGAACGCCTGTCTTTTACTATTTGTGCTATCGGCT
GCAAACCAGGCTCTTCAAATGGCAAGCGTCACACTACACGGGCTTTCTTT
GGACAAGAACGCCCCTTATTTCTTGTGCCGTACCAATAGGCGAGGAACCC
CCATCTATTCGTTGGGTACATGCTCTGCTTTGGCGTGTTTGGCGTACTTG
AATATCTCCAGTGGCTCCAAGAGACTATTTGAATACTCGGTCAACCTGGT
TTCCATGTTCAGTATCCTCACATGGGCTTCGATCCTCGTGATCCATTTCT
CTTTCATTCGAGCAAGAAAGGCTCAAAAGATCACTGATGAGGTCTTGTCC
TTCCGAGCGCCCCTTGGGCTGTTCGGATCGTGGGTTGCACTGGTAGCATG
TGTCTTTGTCACGGTCATACGTGGGCTTGACTTTGTCGACCCAGAATTTT
ACCCCAGAGGAATAGATCGCAGCATGGCATTTGTGACCTCCTACATAGGC
ATTCCACTCTATATCACGCTCGTGATTGGTTATAAGATTGGCACCCAAAG
CAAGCATGTACAACCACAGGATGTTGATATGGGGTCCTTGACACCCATGC
CAGAGCCGCACGTCGCGGATGGCAATACCGTGGGACAAGAAGGATCCGAT
TCAATCCCACTGAACCGGACATAA back to topCoding sequence (CDS) from alignment at NKJJ01000004.1:798869..800742+ >CAN33_1380-T1 ID=CAN33_1380-T1|Name=CAN33_1380-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=8295bp|location=Sequence derived from alignment at NKJJ01000004.1:798869..800742+ (Aspergillus niger FDAARGOS_311)
ATGCCTCATCAAAGTCAGGGAATACAGGGATCTGAAAGAGTTATCCCCAC
GAATGAACACTACGCTTATTCAACCCGACCTCCTAGCCAGGATGGGCTTT
CGGCAGCGTCCTATGGTGTCTTGAAGCCCCGACAAATCACCATGGTTGCT
ATTGGTGGGGCTATCAATACAGGTTTGACGATCTGCGCAGGGAACGCATT
GTCCAAGGCCGGTCCTGCATCGATTTTGATCTCCTATACAGGTGTTGGGG
TAGTTGTCTACTTGGTTCTCTGCGCCTTAGGGGAGGTGGCCTCGTGGTCT
CCCGACCCATCCATGACGGACCATGCTACTAGACTCTGTGATCCTGCGCT
TGGGTTCACTTTGGGATGGATATACTGGTTCAAGTTCATGGTCGTCATCC
CCAACCAGCTGGCAGCAGGAGAATTGCTGATATCGTACTGGCAAGACAAC
GAAGCGAAATACTCGGTTCTTTGGACCACGGCCTTTTTAGGGGTCATCAT
CGCTGCCAATTCCATGTGCGGTCGATATTTGGGAAAGTACGAAGTCATTT
TGTCGTTTTTCAAGGTCCTGGTGATGTCAGGGCTTATGGCTCTATCTATC
GTCCTTGCACTCGGAGGGGGGCCAGATCGCGATATGAAAGGCTTCCGCTA
CTGGAGAGACCCCGGAGCCTTTGCGAATGGTACAGGAGGCGCCGTGGCAG
GTACCGTTCGGGCTATCTGCAGAACAGTCCCTTCCGCTACGCTCGCCTAT
CTTGGGAGTGAGTTGATGGGAATGACGATTTTGCGCACACAAAACCCCCG
AAAAGCCGCAGGTCGGGCGATCAAGGTGACTTTCTATCGCATCTTGGTTT
TCAACATTGTCAATATAACGCTCTTAGGGATGCTCGTTCCGCACGACACC
CACATGCTGGCATTTTCCCACAATGCGCCCCAGCATCGGACGGCCTCGGC
TTTCGTAGCTGTTGCTCAATCAGCCGGGCCTTCGGTAATTCCGCACATCC
TGAACGCCTGTCTTTTACTATTTGTGCTATCGGCTGCAAACCAGGCTCTT
CAAATGGCAAGCGTCACACTACACGGGCTTTCTTTGGACAAGAACGCCCC
TTATTTCTTGTGCCGTACCAATAGGCGAGGAACCCCCATCTATTCGTTGG
GTACATGCTCTGCTTTGGCGTGTTTGGCGTACTTGAATATCTCCAGTGGC
TCCAAGAGACTATTTGAATACTCGGTCAACCTGGTTTCCATGTTCAGTAT
CCTCACATGGGCTTCGATCCTCGTGATCCATTTCTCTTTCATTCGAGCAA
GAAAGGCTCAAAAGATCACTGATGAGGTCTTGTCCTTCCGAGCGCCCCTT
GGGCTGTTCGGATCGTGGGTTGCACTGGTAGCATGTGTCTTTGTCACGGT
CATACGTGGGCTTGACTTTGTCGACCCAGAATTTTACCCCAGAGGAATAG
ATCGCAGCATGGCATTTGTGACCTCCTACATAGGCATTCCACTCTATATC
ACGCTCGTGATTGGTTATAAGATTGGCACCCAAAGCAAGCATGTACAACC
ACAGGATGTTGATATGGGGTCCTTGACACCCATGCCAGAGCCGCACGTCG
CGGATGGCAATACCGTGGGACAAGAAGGATCCGATTCAATCCCACTGAAC
CGGACATAAATGCCTCATCAAAGTCAGGGAATACAGGGATCTGAAAGAGT
TATCCCCACGAATGAACACTACGCTTATTCAACCCGACCTCCTAGCCAGG
ATGGGCTTTCGGCAGCGTCCTATGGTGTCTTGAAGCCCCGACAAATCACC
ATGGTTGCTATTGGTGGGGCTATCAATACAGGTTTGACGATCTGCGCAGG
GAACGCATTGTCCAAGGCCGGTCCTGCATCGATTTTGATCTCCTATACAG
GTGTTGGGGTAGTTGTCTACTTGGTTCTCTGCGCCTTAGGGGAGGTGGCC
TCGTGGTCTCCCGACCCATCCATGACGGACCATGCTACTAGACTCTGTGA
TCCTGCGCTTGGGTTCACTTTGGGATGGATATACTGGTTCAAGTTCATGG
TCGTCATCCCCAACCAGCTGGCAGCAGGAGAATTGCTGATATCGTACTGG
CAAGACAACGAAGCGAAATACTCGGTTCTTTGGACCACGGCCTTTTTAGG
GGTCATCATCGCTGCCAATTCCATGTGCGGTCGATATTTGGGAAAGTACG
AAGTCATTTTGTCGTTTTTCAAGGTCCTGGTGATGTCAGGGCTTATGGCT
CTATCTATCGTCCTTGCACTCGGAGGGGGGCCAGATCGCGATATGAAAGG
CTTCCGCTACTGGAGAGACCCCGGAGCCTTTGCGAATGGTACAGGAGGCG
CCGTGGCAGGTACCGTTCGGGCTATCTGCAGAACAGTCCCTTCCGCTACG
CTCGCCTATCTTGGGAGTGAGTTGATGGGAATGACGATTTTGCGCACACA
AAACCCCCGAAAAGCCGCAGGTCGGGCGATCAAGGTGACTTTCTATCGCA
TCTTGGTTTTCAACATTGTCAATATAACGCTCTTAGGGATGCTCGTTCCG
CACGACACCCACATGCTGGCATTTTCCCACAATGCGCCCCAGCATCGGAC
GGCCTCGGCTTTCGTAGCTGTTGCTCAATCAGCCGGGCCTTCGGTAATTC
CGCACATCCTGAACGCCTGTCTTTTACTATTTGTGCTATCGGCTGCAAAC
CAGGCTCTTCAAATGGCAAGCGTCACACTACACGGGCTTTCTTTGGACAA
GAACGCCCCTTATTTCTTGTGCCGTACCAATAGGCGAGGAACCCCCATCT
ATTCGTTGGGTACATGCTCTGCTTTGGCGTGTTTGGCGTACTTGAATATC
TCCAGTGGCTCCAAGAGACTATTTGAATACTCGGTCAACCTGGTTTCCAT
GTTCAGTATCCTCACATGGGCTTCGATCCTCGTGATCCATTTCTCTTTCA
TTCGAGCAAGAAAGGCTCAAAAGATCACTGATGAGGTCTTGTCCTTCCGA
GCGCCCCTTGGGCTGTTCGGATCGTGGGTTGCACTGGTAGCATGTGTCTT
TGTCACGGTCATACGTGGGCTTGACTTTGTCGACCCAGAATTTTACCCCA
GAGGAATAGATCGCAGCATGGCATTTGTGACCTCCTACATAGGCATTCCA
CTCTATATCACGCTCGTGATTGGTTATAAGATTGGCACCCAAAGCAAGCA
TGTACAACCACAGGATGTTGATATGGGGTCCTTGACACCCATGCCAGAGC
CGCACGTCGCGGATGGCAATACCGTGGGACAAGAAGGATCCGATTCAATC
CCACTGAACCGGACATAAATGCCTCATCAAAGTCAGGGAATACAGGGATC
TGAAAGAGTTATCCCCACGAATGAACACTACGCTTATTCAACCCGACCTC
CTAGCCAGGATGGGCTTTCGGCAGCGTCCTATGGTGTCTTGAAGCCCCGA
CAAATCACCATGGTTGCTATTGGTGGGGCTATCAATACAGGTTTGACGAT
CTGCGCAGGGAACGCATTGTCCAAGGCCGGTCCTGCATCGATTTTGATCT
CCTATACAGGTGTTGGGGTAGTTGTCTACTTGGTTCTCTGCGCCTTAGGG
GAGGTGGCCTCGTGGTCTCCCGACCCATCCATGACGGACCATGCTACTAG
ACTCTGTGATCCTGCGCTTGGGTTCACTTTGGGATGGATATACTGGTTCA
AGTTCATGGTCGTCATCCCCAACCAGCTGGCAGCAGGAGAATTGCTGATA
TCGTACTGGCAAGACAACGAAGCGAAATACTCGGTTCTTTGGACCACGGC
CTTTTTAGGGGTCATCATCGCTGCCAATTCCATGTGCGGTCGATATTTGG
GAAAGTACGAAGTCATTTTGTCGTTTTTCAAGGTCCTGGTGATGTCAGGG
CTTATGGCTCTATCTATCGTCCTTGCACTCGGAGGGGGGCCAGATCGCGA
TATGAAAGGCTTCCGCTACTGGAGAGACCCCGGAGCCTTTGCGAATGGTA
CAGGAGGCGCCGTGGCAGGTACCGTTCGGGCTATCTGCAGAACAGTCCCT
TCCGCTACGCTCGCCTATCTTGGGAGTGAGTTGATGGGAATGACGATTTT
GCGCACACAAAACCCCCGAAAAGCCGCAGGTCGGGCGATCAAGGTGACTT
TCTATCGCATCTTGGTTTTCAACATTGTCAATATAACGCTCTTAGGGATG
CTCGTTCCGCACGACACCCACATGCTGGCATTTTCCCACAATGCGCCCCA
GCATCGGACGGCCTCGGCTTTCGTAGCTGTTGCTCAATCAGCCGGGCCTT
CGGTAATTCCGCACATCCTGAACGCCTGTCTTTTACTATTTGTGCTATCG
GCTGCAAACCAGGCTCTTCAAATGGCAAGCGTCACACTACACGGGCTTTC
TTTGGACAAGAACGCCCCTTATTTCTTGTGCCGTACCAATAGGCGAGGAA
CCCCCATCTATTCGTTGGGTACATGCTCTGCTTTGGCGTGTTTGGCGTAC
TTGAATATCTCCAGTGGCTCCAAGAGACTATTTGAATACTCGGTCAACCT
GGTTTCCATGTTCAGTATCCTCACATGGGCTTCGATCCTCGTGATCCATT
TCTCTTTCATTCGAGCAAGAAAGGCTCAAAAGATCACTGATGAGGTCTTG
TCCTTCCGAGCGCCCCTTGGGCTGTTCGGATCGTGGGTTGCACTGGTAGC
ATGTGTCTTTGTCACGGTCATACGTGGGCTTGACTTTGTCGACCCAGAAT
TTTACCCCAGAGGAATAGATCGCAGCATGGCATTTGTGACCTCCTACATA
GGCATTCCACTCTATATCACGCTCGTGATTGGTTATAAGATTGGCACCCA
AAGCAAGCATGTACAACCACAGGATGTTGATATGGGGTCCTTGACACCCA
TGCCAGAGCCGCACGTCGCGGATGGCAATACCGTGGGACAAGAAGGATCC
GATTCAATCCCACTGAACCGGACATAAATGCCTCATCAAAGTCAGGGAAT
ACAGGGATCTGAAAGAGTTATCCCCACGAATGAACACTACGCTTATTCAA
CCCGACCTCCTAGCCAGGATGGGCTTTCGGCAGCGTCCTATGGTGTCTTG
AAGCCCCGACAAATCACCATGGTTGCTATTGGTGGGGCTATCAATACAGG
TTTGACGATCTGCGCAGGGAACGCATTGTCCAAGGCCGGTCCTGCATCGA
TTTTGATCTCCTATACAGGTGTTGGGGTAGTTGTCTACTTGGTTCTCTGC
GCCTTAGGGGAGGTGGCCTCGTGGTCTCCCGACCCATCCATGACGGACCA
TGCTACTAGACTCTGTGATCCTGCGCTTGGGTTCACTTTGGGATGGATAT
ACTGGTTCAAGTTCATGGTCGTCATCCCCAACCAGCTGGCAGCAGGAGAA
TTGCTGATATCGTACTGGCAAGACAACGAAGCGAAATACTCGGTTCTTTG
GACCACGGCCTTTTTAGGGGTCATCATCGCTGCCAATTCCATGTGCGGTC
GATATTTGGGAAAGTACGAAGTCATTTTGTCGTTTTTCAAGGTCCTGGTG
ATGTCAGGGCTTATGGCTCTATCTATCGTCCTTGCACTCGGAGGGGGGCC
AGATCGCGATATGAAAGGCTTCCGCTACTGGAGAGACCCCGGAGCCTTTG
CGAATGGTACAGGAGGCGCCGTGGCAGGTACCGTTCGGGCTATCTGCAGA
ACAGTCCCTTCCGCTACGCTCGCCTATCTTGGGAGTGAGTTGATGGGAAT
GACGATTTTGCGCACACAAAACCCCCGAAAAGCCGCAGGTCGGGCGATCA
AGGTGACTTTCTATCGCATCTTGGTTTTCAACATTGTCAATATAACGCTC
TTAGGGATGCTCGTTCCGCACGACACCCACATGCTGGCATTTTCCCACAA
TGCGCCCCAGCATCGGACGGCCTCGGCTTTCGTAGCTGTTGCTCAATCAG
CCGGGCCTTCGGTAATTCCGCACATCCTGAACGCCTGTCTTTTACTATTT
GTGCTATCGGCTGCAAACCAGGCTCTTCAAATGGCAAGCGTCACACTACA
CGGGCTTTCTTTGGACAAGAACGCCCCTTATTTCTTGTGCCGTACCAATA
GGCGAGGAACCCCCATCTATTCGTTGGGTACATGCTCTGCTTTGGCGTGT
TTGGCGTACTTGAATATCTCCAGTGGCTCCAAGAGACTATTTGAATACTC
GGTCAACCTGGTTTCCATGTTCAGTATCCTCACATGGGCTTCGATCCTCG
TGATCCATTTCTCTTTCATTCGAGCAAGAAAGGCTCAAAAGATCACTGAT
GAGGTCTTGTCCTTCCGAGCGCCCCTTGGGCTGTTCGGATCGTGGGTTGC
ACTGGTAGCATGTGTCTTTGTCACGGTCATACGTGGGCTTGACTTTGTCG
ACCCAGAATTTTACCCCAGAGGAATAGATCGCAGCATGGCATTTGTGACC
TCCTACATAGGCATTCCACTCTATATCACGCTCGTGATTGGTTATAAGAT
TGGCACCCAAAGCAAGCATGTACAACCACAGGATGTTGATATGGGGTCCT
TGACACCCATGCCAGAGCCGCACGTCGCGGATGGCAATACCGTGGGACAA
GAAGGATCCGATTCAATCCCACTGAACCGGACATAAATGCCTCATCAAAG
TCAGGGAATACAGGGATCTGAAAGAGTTATCCCCACGAATGAACACTACG
CTTATTCAACCCGACCTCCTAGCCAGGATGGGCTTTCGGCAGCGTCCTAT
GGTGTCTTGAAGCCCCGACAAATCACCATGGTTGCTATTGGTGGGGCTAT
CAATACAGGTTTGACGATCTGCGCAGGGAACGCATTGTCCAAGGCCGGTC
CTGCATCGATTTTGATCTCCTATACAGGTGTTGGGGTAGTTGTCTACTTG
GTTCTCTGCGCCTTAGGGGAGGTGGCCTCGTGGTCTCCCGACCCATCCAT
GACGGACCATGCTACTAGACTCTGTGATCCTGCGCTTGGGTTCACTTTGG
GATGGATATACTGGTTCAAGTTCATGGTCGTCATCCCCAACCAGCTGGCA
GCAGGAGAATTGCTGATATCGTACTGGCAAGACAACGAAGCGAAATACTC
GGTTCTTTGGACCACGGCCTTTTTAGGGGTCATCATCGCTGCCAATTCCA
TGTGCGGTCGATATTTGGGAAAGTACGAAGTCATTTTGTCGTTTTTCAAG
GTCCTGGTGATGTCAGGGCTTATGGCTCTATCTATCGTCCTTGCACTCGG
AGGGGGGCCAGATCGCGATATGAAAGGCTTCCGCTACTGGAGAGACCCCG
GAGCCTTTGCGAATGGTACAGGAGGCGCCGTGGCAGGTACCGTTCGGGCT
ATCTGCAGAACAGTCCCTTCCGCTACGCTCGCCTATCTTGGGAGTGAGTT
GATGGGAATGACGATTTTGCGCACACAAAACCCCCGAAAAGCCGCAGGTC
GGGCGATCAAGGTGACTTTCTATCGCATCTTGGTTTTCAACATTGTCAAT
ATAACGCTCTTAGGGATGCTCGTTCCGCACGACACCCACATGCTGGCATT
TTCCCACAATGCGCCCCAGCATCGGACGGCCTCGGCTTTCGTAGCTGTTG
CTCAATCAGCCGGGCCTTCGGTAATTCCGCACATCCTGAACGCCTGTCTT
TTACTATTTGTGCTATCGGCTGCAAACCAGGCTCTTCAAATGGCAAGCGT
CACACTACACGGGCTTTCTTTGGACAAGAACGCCCCTTATTTCTTGTGCC
GTACCAATAGGCGAGGAACCCCCATCTATTCGTTGGGTACATGCTCTGCT
TTGGCGTGTTTGGCGTACTTGAATATCTCCAGTGGCTCCAAGAGACTATT
TGAATACTCGGTCAACCTGGTTTCCATGTTCAGTATCCTCACATGGGCTT
CGATCCTCGTGATCCATTTCTCTTTCATTCGAGCAAGAAAGGCTCAAAAG
ATCACTGATGAGGTCTTGTCCTTCCGAGCGCCCCTTGGGCTGTTCGGATC
GTGGGTTGCACTGGTAGCATGTGTCTTTGTCACGGTCATACGTGGGCTTG
ACTTTGTCGACCCAGAATTTTACCCCAGAGGAATAGATCGCAGCATGGCA
TTTGTGACCTCCTACATAGGCATTCCACTCTATATCACGCTCGTGATTGG
TTATAAGATTGGCACCCAAAGCAAGCATGTACAACCACAGGATGTTGATA
TGGGGTCCTTGACACCCATGCCAGAGCCGCACGTCGCGGATGGCAATACC
GTGGGACAAGAAGGATCCGATTCAATCCCACTGAACCGGACATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
| GO:0016020 | membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006865 | amino acid transport |
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR004840 |
| DBxref | InterPro:IPR004841 |
| DBxref | InterPro:IPR002293 |
| DBxref | PFAM:PF13520 |
| DBxref | PFAM:PF00324 |
| Product | Amino acid permease family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000004.1 | supercontig | NKJJ01000004.1:798869..800742 + |
|
