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CAN33_13825-T1, CAN33_13825-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_13825-T1
Unique NameCAN33_13825-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000010.1:1076629..1077757-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_13825-T1 ID=CAN33_13825-T1|Name=CAN33_13825-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1129bp|location=Sequence derived from alignment at NKJJ01000010.1:1076629..1077757- (Aspergillus niger FDAARGOS_311)
ATGGGTTCGACTTCGACCGTCGCAGACACCCGCTTCAAGCTGAACACCGG
GGCTGAGATCCCTGCTCTCGGACTCGGTATGATACATCTTCAGATAGTAA
CCACAAGGATATTCTGGCTAACGTCTGTGCAGGAACCTGGCAGTCAGGCC
CTGGAGAGGTCGAAAAGGCCGTGGCACATGCCATCTCCGTTGGATACAGA
CACATTGATACCGCTTTTGCTTACGGAAACGAAGGAGAAGTCGGCAAGGG
TATCAAGGCAGCCATCGAGTCTGGAGTTGTCAAGCGAGAGGACCTCTTTG
TCACAACTAAGCTCTGGAGCACATGGCACTACCGAGTGGAACAGGCTCTG
GACCAGAGCTTGAAGAACTTGGGGCTGGACTATGTTGATCTCTACCTGGT
CCACTGGCCGGTGGCTATGAACCCTAATGGTGAGTCCTCCACTAATTTAG
ACTCAAGGCGATGCGCATGTTGACATTACAAAGGAAACCACCCCAATATT
CCCACCCTTCCCGACGGTTCCCGCGACCTGCACCTCAACCACTCCCATAT
CAACACTTGGAAGGATATGGAGAAGCTTGTCGGTAGCGGAAAGACCAAGG
CCATTGGTGTTTGCAACTACAGCAGGCCCTACCTTGAGGAGCTCCTCGCC
CAAGCCACCGTGGTCCCGGCTGTCAACCAGATTGAGAACCACCCCTGCCT
TCCCCAGCAGGAGGCGGTCGACTTCTGCAAGGAGAAGGGCATTCACATCA
CGGCATACAGCCCTCTCGGCAGCACGGGCAGTCCGCTGCTGACAGCAGAG
CCCATTGTCGAGGTTGCGAAGAAGAAGGGTGTCGACCCAGCCACGGTCCT
GCTGAGCTGGCACAGTACGTATCTTCCATGCCGAATAATGCGAGAATTAT
CACTAACTGCATCCTCCGTGTAGTCAGCCGTGGCTCTTCCGTCCTTGCCA
AGTCTGTGAACCCCTCTCGGATTGAGGGCAACCGCAACCTGGTGGCATTG
GATGATGCTGATATGGCTACCATTGCCAAATACACGAATGACCTGGCCTC
GAAGAACGCCTTTCAGCGTTTTGTTTTCCCTCCTTTCAAGCTTGACTTCG
GATTCCCGGACAAGATCGGCCGCGTATAA
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Coding sequence (CDS) from alignment at NKJJ01000010.1:1076629..1077757-

>CAN33_13825-T1 ID=CAN33_13825-T1|Name=CAN33_13825-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3840bp|location=Sequence derived from alignment at NKJJ01000010.1:1076629..1077757- (Aspergillus niger FDAARGOS_311)
TCAGCCGTGGCTCTTCCGTCCTTGCCAAGTCTGTGAACCCCTCTCGGATT
GAGGGCAACCGCAACCTGGTGGCATTGGATGATGCTGATATGGCTACCAT
TGCCAAATACACGAATGACCTGGCCTCGAAGAACGCCTTTCAGCGTTTTG
TTTTCCCTCCTTTCAAGCTTGACTTCGGATTCCCGGACAAGATCGGCCGC
GTATAAGAAACCACCCCAATATTCCCACCCTTCCCGACGGTTCCCGCGAC
CTGCACCTCAACCACTCCCATATCAACACTTGGAAGGATATGGAGAAGCT
TGTCGGTAGCGGAAAGACCAAGGCCATTGGTGTTTGCAACTACAGCAGGC
CCTACCTTGAGGAGCTCCTCGCCCAAGCCACCGTGGTCCCGGCTGTCAAC
CAGATTGAGAACCACCCCTGCCTTCCCCAGCAGGAGGCGGTCGACTTCTG
CAAGGAGAAGGGCATTCACATCACGGCATACAGCCCTCTCGGCAGCACGG
GCAGTCCGCTGCTGACAGCAGAGCCCATTGTCGAGGTTGCGAAGAAGAAG
GGTGTCGACCCAGCCACGGTCCTGCTGAGCTGGCACAGAACCTGGCAGTC
AGGCCCTGGAGAGGTCGAAAAGGCCGTGGCACATGCCATCTCCGTTGGAT
ACAGACACATTGATACCGCTTTTGCTTACGGAAACGAAGGAGAAGTCGGC
AAGGGTATCAAGGCAGCCATCGAGTCTGGAGTTGTCAAGCGAGAGGACCT
CTTTGTCACAACTAAGCTCTGGAGCACATGGCACTACCGAGTGGAACAGG
CTCTGGACCAGAGCTTGAAGAACTTGGGGCTGGACTATGTTGATCTCTAC
CTGGTCCACTGGCCGGTGGCTATGAACCCTAATGATGGGTTCGACTTCGA
CCGTCGCAGACACCCGCTTCAAGCTGAACACCGGGGCTGAGATCCCTGCT
CTCGGACTCGTCAGCCGTGGCTCTTCCGTCCTTGCCAAGTCTGTGAACCC
CTCTCGGATTGAGGGCAACCGCAACCTGGTGGCATTGGATGATGCTGATA
TGGCTACCATTGCCAAATACACGAATGACCTGGCCTCGAAGAACGCCTTT
CAGCGTTTTGTTTTCCCTCCTTTCAAGCTTGACTTCGGATTCCCGGACAA
GATCGGCCGCGTATAAGAAACCACCCCAATATTCCCACCCTTCCCGACGG
TTCCCGCGACCTGCACCTCAACCACTCCCATATCAACACTTGGAAGGATA
TGGAGAAGCTTGTCGGTAGCGGAAAGACCAAGGCCATTGGTGTTTGCAAC
TACAGCAGGCCCTACCTTGAGGAGCTCCTCGCCCAAGCCACCGTGGTCCC
GGCTGTCAACCAGATTGAGAACCACCCCTGCCTTCCCCAGCAGGAGGCGG
TCGACTTCTGCAAGGAGAAGGGCATTCACATCACGGCATACAGCCCTCTC
GGCAGCACGGGCAGTCCGCTGCTGACAGCAGAGCCCATTGTCGAGGTTGC
GAAGAAGAAGGGTGTCGACCCAGCCACGGTCCTGCTGAGCTGGCACAGAA
CCTGGCAGTCAGGCCCTGGAGAGGTCGAAAAGGCCGTGGCACATGCCATC
TCCGTTGGATACAGACACATTGATACCGCTTTTGCTTACGGAAACGAAGG
AGAAGTCGGCAAGGGTATCAAGGCAGCCATCGAGTCTGGAGTTGTCAAGC
GAGAGGACCTCTTTGTCACAACTAAGCTCTGGAGCACATGGCACTACCGA
GTGGAACAGGCTCTGGACCAGAGCTTGAAGAACTTGGGGCTGGACTATGT
TGATCTCTACCTGGTCCACTGGCCGGTGGCTATGAACCCTAATGATGGGT
TCGACTTCGACCGTCGCAGACACCCGCTTCAAGCTGAACACCGGGGCTGA
GATCCCTGCTCTCGGACTCGTCAGCCGTGGCTCTTCCGTCCTTGCCAAGT
CTGTGAACCCCTCTCGGATTGAGGGCAACCGCAACCTGGTGGCATTGGAT
GATGCTGATATGGCTACCATTGCCAAATACACGAATGACCTGGCCTCGAA
GAACGCCTTTCAGCGTTTTGTTTTCCCTCCTTTCAAGCTTGACTTCGGAT
TCCCGGACAAGATCGGCCGCGTATAAGAAACCACCCCAATATTCCCACCC
TTCCCGACGGTTCCCGCGACCTGCACCTCAACCACTCCCATATCAACACT
TGGAAGGATATGGAGAAGCTTGTCGGTAGCGGAAAGACCAAGGCCATTGG
TGTTTGCAACTACAGCAGGCCCTACCTTGAGGAGCTCCTCGCCCAAGCCA
CCGTGGTCCCGGCTGTCAACCAGATTGAGAACCACCCCTGCCTTCCCCAG
CAGGAGGCGGTCGACTTCTGCAAGGAGAAGGGCATTCACATCACGGCATA
CAGCCCTCTCGGCAGCACGGGCAGTCCGCTGCTGACAGCAGAGCCCATTG
TCGAGGTTGCGAAGAAGAAGGGTGTCGACCCAGCCACGGTCCTGCTGAGC
TGGCACAGAACCTGGCAGTCAGGCCCTGGAGAGGTCGAAAAGGCCGTGGC
ACATGCCATCTCCGTTGGATACAGACACATTGATACCGCTTTTGCTTACG
GAAACGAAGGAGAAGTCGGCAAGGGTATCAAGGCAGCCATCGAGTCTGGA
GTTGTCAAGCGAGAGGACCTCTTTGTCACAACTAAGCTCTGGAGCACATG
GCACTACCGAGTGGAACAGGCTCTGGACCAGAGCTTGAAGAACTTGGGGC
TGGACTATGTTGATCTCTACCTGGTCCACTGGCCGGTGGCTATGAACCCT
AATGATGGGTTCGACTTCGACCGTCGCAGACACCCGCTTCAAGCTGAACA
CCGGGGCTGAGATCCCTGCTCTCGGACTCGTCAGCCGTGGCTCTTCCGTC
CTTGCCAAGTCTGTGAACCCCTCTCGGATTGAGGGCAACCGCAACCTGGT
GGCATTGGATGATGCTGATATGGCTACCATTGCCAAATACACGAATGACC
TGGCCTCGAAGAACGCCTTTCAGCGTTTTGTTTTCCCTCCTTTCAAGCTT
GACTTCGGATTCCCGGACAAGATCGGCCGCGTATAAGAAACCACCCCAAT
ATTCCCACCCTTCCCGACGGTTCCCGCGACCTGCACCTCAACCACTCCCA
TATCAACACTTGGAAGGATATGGAGAAGCTTGTCGGTAGCGGAAAGACCA
AGGCCATTGGTGTTTGCAACTACAGCAGGCCCTACCTTGAGGAGCTCCTC
GCCCAAGCCACCGTGGTCCCGGCTGTCAACCAGATTGAGAACCACCCCTG
CCTTCCCCAGCAGGAGGCGGTCGACTTCTGCAAGGAGAAGGGCATTCACA
TCACGGCATACAGCCCTCTCGGCAGCACGGGCAGTCCGCTGCTGACAGCA
GAGCCCATTGTCGAGGTTGCGAAGAAGAAGGGTGTCGACCCAGCCACGGT
CCTGCTGAGCTGGCACAGAACCTGGCAGTCAGGCCCTGGAGAGGTCGAAA
AGGCCGTGGCACATGCCATCTCCGTTGGATACAGACACATTGATACCGCT
TTTGCTTACGGAAACGAAGGAGAAGTCGGCAAGGGTATCAAGGCAGCCAT
CGAGTCTGGAGTTGTCAAGCGAGAGGACCTCTTTGTCACAACTAAGCTCT
GGAGCACATGGCACTACCGAGTGGAACAGGCTCTGGACCAGAGCTTGAAG
AACTTGGGGCTGGACTATGTTGATCTCTACCTGGTCCACTGGCCGGTGGC
TATGAACCCTAATGATGGGTTCGACTTCGACCGTCGCAGACACCCGCTTC
AAGCTGAACACCGGGGCTGAGATCCCTGCTCTCGGACTCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
GAR1CAN33_13825Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_13825-T1CAN33_13825-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_13825-T1.cdsCAN33_13825-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_13825-T1.exon4CAN33_13825-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_13825-T1.exon3CAN33_13825-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_13825-T1.exon2CAN33_13825-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_13825-T1.exon1CAN33_13825-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR018170
DBxrefInterPro:IPR023210
DBxrefInterPro:IPR036812
DBxrefInterPro:IPR020471
DBxrefPFAM:PF00248
ProductH/ACA snoRNP pseudouridylase subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000010.1supercontigNKJJ01000010.1:1076629..1077757 -
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