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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000010.1:1105728..1106430+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_13880-T1 ID=CAN33_13880-T1|Name=CAN33_13880-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=703bp|location=Sequence derived from alignment at NKJJ01000010.1:1105728..1106430+ (Aspergillus niger FDAARGOS_311)
ATGGGCGGCGACCTCAACTTGAAGAAGTAAGCCTATCCTCTCCCCCAACC
CTCCTCTCCTCTCTGTCCCCCATCCCGCTAACGCGATACCACCCCCAAAA
CAGATCATGGCACCCCTCCCTCCTCCGAAACCAAGAGCGCGTATGGGCAG
AAGAAAAACGCGCGCTGGAAGAGCGCAAACGCATCGACCAGCTCCGGCGC
GAGCGCGACGAAGAGCGGCAAATCCAAGAACTCCAACGGCTACAAGAAGG
GTCCGGGAAACCGAAGCAGATCCAGCGCGTGGACTGGATGTATCAGGAGC
CTGGGGCCGGAGGAGCAGGTGGAGGAATGTACGCGGAGGAAATGGAGGGG
TATCTTTTGGGGAAAAGACGGATCGATGGCGTTCTGTTGAAGAAAGATGG
CGGCGAGACGGAGGGGTTGAAGAAGGGGGCGGAGTTTAATGCGACGCTTG
GAGGTGGTGGTGCGGTGGCGCAGGCGAATCCCAGAGATACTATGGCCAAG
GTGTTGGCGGATCCGCTGTTGGAGATCAGGAAGAGGGAGCAGGCGGCGTT
GGAGGGGATGGTTAGGGAGGAGGTTAGGAAGGGATCTTCTTCAAAGGGAG
AGAAGAGGGATAGGGATAGGGATGGTCATAGGGAGAGGAGGAGGGAGAGA
GAGAGGAGGCATCGGTCGAGGTCGCCGGAGAGGAGGCGGAGAGATACACT
TGA back to topCoding sequence (CDS) from alignment at NKJJ01000010.1:1105728..1106430+ >CAN33_13880-T1 ID=CAN33_13880-T1|Name=CAN33_13880-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1701bp|location=Sequence derived from alignment at NKJJ01000010.1:1105728..1106430+ (Aspergillus niger FDAARGOS_311)
ATGGGCGGCGACCTCAACTTGAAGAAATCATGGCACCCCTCCCTCCTCCG
AAACCAAGAGCGCGTATGGGCAGAAGAAAAACGCGCGCTGGAAGAGCGCA
AACGCATCGACCAGCTCCGGCGCGAGCGCGACGAAGAGCGGCAAATCCAA
GAACTCCAACGGCTACAAGAAGGGTCCGGGAAACCGAAGCAGATCCAGCG
CGTGGACTGGATGTATCAGGAGCCTGGGGCCGGAGGAGCAGGTGGAGGAA
TGTACGCGGAGGAAATGGAGGGGTATCTTTTGGGGAAAAGACGGATCGAT
GGCGTTCTGTTGAAGAAAGATGGCGGCGAGACGGAGGGGTTGAAGAAGGG
GGCGGAGTTTAATGCGACGCTTGGAGGTGGTGGTGCGGTGGCGCAGGCGA
ATCCCAGAGATACTATGGCCAAGGTGTTGGCGGATCCGCTGTTGGAGATC
AGGAAGAGGGAGCAGGCGGCGTTGGAGGGGATGGTTAGGGAGGAGGGAGA
GGAGGAGGGAGAGAGAGAGGAGGCATCGGTCGAGGTCGCCGGAGAGGAGG
CGGAGAGATACACTTGAATGGGCGGCGACCTCAACTTGAAGAAATCATGG
CACCCCTCCCTCCTCCGAAACCAAGAGCGCGTATGGGCAGAAGAAAAACG
CGCGCTGGAAGAGCGCAAACGCATCGACCAGCTCCGGCGCGAGCGCGACG
AAGAGCGGCAAATCCAAGAACTCCAACGGCTACAAGAAGGGTCCGGGAAA
CCGAAGCAGATCCAGCGCGTGGACTGGATGTATCAGGAGCCTGGGGCCGG
AGGAGCAGGTGGAGGAATGTACGCGGAGGAAATGGAGGGGTATCTTTTGG
GGAAAAGACGGATCGATGGCGTTCTGTTGAAGAAAGATGGCGGCGAGACG
GAGGGGTTGAAGAAGGGGGCGGAGTTTAATGCGACGCTTGGAGGTGGTGG
TGCGGTGGCGCAGGCGAATCCCAGAGATACTATGGCCAAGGTGTTGGCGG
ATCCGCTGTTGGAGATCAGGAAGAGGGAGCAGGCGGCGTTGGAGGGGATG
GTTAGGGAGGAGGGAGAGGAGGAGGGAGAGAGAGAGGAGGCATCGGTCGA
GGTCGCCGGAGAGGAGGCGGAGAGATACACTTGAATGGGCGGCGACCTCA
ACTTGAAGAAATCATGGCACCCCTCCCTCCTCCGAAACCAAGAGCGCGTA
TGGGCAGAAGAAAAACGCGCGCTGGAAGAGCGCAAACGCATCGACCAGCT
CCGGCGCGAGCGCGACGAAGAGCGGCAAATCCAAGAACTCCAACGGCTAC
AAGAAGGGTCCGGGAAACCGAAGCAGATCCAGCGCGTGGACTGGATGTAT
CAGGAGCCTGGGGCCGGAGGAGCAGGTGGAGGAATGTACGCGGAGGAAAT
GGAGGGGTATCTTTTGGGGAAAAGACGGATCGATGGCGTTCTGTTGAAGA
AAGATGGCGGCGAGACGGAGGGGTTGAAGAAGGGGGCGGAGTTTAATGCG
ACGCTTGGAGGTGGTGGTGCGGTGGCGCAGGCGAATCCCAGAGATACTAT
GGCCAAGGTGTTGGCGGATCCGCTGTTGGAGATCAGGAAGAGGGAGCAGG
CGGCGTTGGAGGGGATGGTTAGGGAGGAGGGAGAGGAGGAGGGAGAGAGA
GAGGAGGCATCGGTCGAGGTCGCCGGAGAGGAGGCGGAGAGATACACTTG
A back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR022209 |
| DBxref | InterPro:IPR019339 |
| DBxref | PFAM:PF12542 |
| DBxref | PFAM:PF10197 |
| Product | RNA-splicing factor |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000010.1 | supercontig | NKJJ01000010.1:1105728..1106430 + |
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