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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000010.1:1122562..1123526+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_13925-T1 ID=CAN33_13925-T1|Name=CAN33_13925-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=965bp|location=Sequence derived from alignment at NKJJ01000010.1:1122562..1123526+ (Aspergillus niger FDAARGOS_311)
ATGTCCACTCGCCAGCGTCGCCCCACTCAAGTCCATGAGAAGGATCTGGG
TACCAGCCAGCCTGCTGTGGTGGCAGCTGCGGTGTTGGAACAGCCTTCCC
AAGTCATCAGAAAGCTTCTTCACTGGGATGATCTGCCCCATTGGCAGCGC
GACAACCAGCACATTCACACGGGCTATCGGCCGGCATCGTTCTCTCTTCT
GGTCTCCCTGCAGTCCTTGACCTACCTTCACAATGAAACGGTCAACATCT
ACACGCATCTGCTGCCGTCTTTACTGGCCGTTCCAGCGGCTGGGCTTCTC
TATCGGGCACTAGCTCCGCGATATGAGAGTGCCACCCAGGCGGATCTGGT
TGCTTTTGGATGCTTCTTCGCGGGGGCAGCCTTCTGTTTGGGCATGTCTG
CAACATATCATACCATTTCGAATCACTCCCCCTCGTGGCCCGCATCGGAA
ACACGTTTGACTATGTTGGTATCGTAGGGCTTATCGTGGGCAGCTTCGTG
CCTAGCGTGTACTTTGGATTCTACTGTATGCCTGATCTGCAACGGTTGTA
TTGGACGATGATCTGCGCTCTCGGTCTTGGCTGCATCCTTGTTTCGATCT
TCCCTCATTTCCGGACGCCTCGGTGGCGGCCATTCCGTGCGTCCATGTTT
GTCGGCATGGGTCTGTCAGCGGTGTTCCCCGTGATCCACGGCTTACGCTT
GTACGGTCTGGAGCAGATGACACGCCAAATCGGGCTCGGCTGGCTGCTTC
TCCAAGGTTTTCTGTACATTTTGGGAGCAACCATCTATGCGGCCCGGGTG
CCGGAGCGCTTGCGACCAGGCCACTTCGATCTCTGGGGCAGTTCCCATCA
GATCTTTCATGTGCTGGTGGTCTGCGCTGCCATTGCTCATCTGACCGGGT
TGCTAAAGGCATTTGATTACAGACACAGCGGCATTGCAGACAGTTGTCTT
GGGGCCGCGCAATGA back to topCoding sequence (CDS) from alignment at NKJJ01000010.1:1122562..1123526+ >CAN33_13925-T1 ID=CAN33_13925-T1|Name=CAN33_13925-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1872bp|location=Sequence derived from alignment at NKJJ01000010.1:1122562..1123526+ (Aspergillus niger FDAARGOS_311)
ATGTCCACTCGCCAGCGTCGCCCCACTCAAGTCCATGAGAAGGATCTGGG
TACCAGCCAGCCTGCTGTGGTGGCAGCTGCGGTGTTGGAACAGCCTTCCC
AAGTCATCAGAAAGCTTCTTCACTGGGATGATCTGCCCCATTGGCAGCGC
GACAACCAGCACATTCACACGGGCTATCGGCCGGCATCGTTCTCTCTTCT
GGTCTCCCTGCAGTCCTTGACCTACCTTCACAATGAAACGGTCAACATCT
ACACGCATCTGCTGCCGTCTTTACTGGCCGTTCCAGCGGCTGGGCTTCTC
TATCGGGCACTAGCTCCGCGATATGAGAGTGCCACCCAGGCGGATCTGGT
TGCTTTTGGATGCTTCTTCGCGGGGGCAGCCTTCTGTTTGGGCATGTCTG
CAACATATCATACCATTTCGAATCACTCCCCCTCGTGGCCCGCATCGGAA
ACACGTTTGACTATCTTCGTGCCTAGCGTGTACTTTGGATTCTACTGTAT
GCCTGATCTGCAACGGTTGTATTGGACGATGATCTGCGCTCTCGGTCTTG
GCTGCATCCTTGTTTCGATCTTCCCTCATTTCCGGACGCCTCGGTGGCGG
CCATTCCGTGCGTCCATGTTTGTCGGCATGGGTCTGTCAGCGGTGTTCCC
CGTGATCCACGGCTTACGCTTGTACGGTCTGGAGCAGATGACACGCCAAA
TCGGGCTCGGCTGGCTGCTTCTCCAAGGTTTTCTGTACATTTTGGGAGCA
ACCATCTATGCGGCCCGGGTGCCGGAGCGCTTGCGACCAGGCCACTTCGA
TCTCTGGGGCAGTTCCCATCAGATCTTTCATGTGCTGGTGGTCTGCGCTG
CCATTGCTCATCTGACCGGGTTGCTAAAGGCATTTGATTACAGACACAGC
GGCATTGCAGACAGTTGTCTTGGGGCCGCGCAATGAATGTCCACTCGCCA
GCGTCGCCCCACTCAAGTCCATGAGAAGGATCTGGGTACCAGCCAGCCTG
CTGTGGTGGCAGCTGCGGTGTTGGAACAGCCTTCCCAAGTCATCAGAAAG
CTTCTTCACTGGGATGATCTGCCCCATTGGCAGCGCGACAACCAGCACAT
TCACACGGGCTATCGGCCGGCATCGTTCTCTCTTCTGGTCTCCCTGCAGT
CCTTGACCTACCTTCACAATGAAACGGTCAACATCTACACGCATCTGCTG
CCGTCTTTACTGGCCGTTCCAGCGGCTGGGCTTCTCTATCGGGCACTAGC
TCCGCGATATGAGAGTGCCACCCAGGCGGATCTGGTTGCTTTTGGATGCT
TCTTCGCGGGGGCAGCCTTCTGTTTGGGCATGTCTGCAACATATCATACC
ATTTCGAATCACTCCCCCTCGTGGCCCGCATCGGAAACACGTTTGACTAT
CTTCGTGCCTAGCGTGTACTTTGGATTCTACTGTATGCCTGATCTGCAAC
GGTTGTATTGGACGATGATCTGCGCTCTCGGTCTTGGCTGCATCCTTGTT
TCGATCTTCCCTCATTTCCGGACGCCTCGGTGGCGGCCATTCCGTGCGTC
CATGTTTGTCGGCATGGGTCTGTCAGCGGTGTTCCCCGTGATCCACGGCT
TACGCTTGTACGGTCTGGAGCAGATGACACGCCAAATCGGGCTCGGCTGG
CTGCTTCTCCAAGGTTTTCTGTACATTTTGGGAGCAACCATCTATGCGGC
CCGGGTGCCGGAGCGCTTGCGACCAGGCCACTTCGATCTCTGGGGCAGTT
CCCATCAGATCTTTCATGTGCTGGTGGTCTGCGCTGCCATTGCTCATCTG
ACCGGGTTGCTAAAGGCATTTGATTACAGACACAGCGGCATTGCAGACAG
TTGTCTTGGGGCCGCGCAATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR004254 |
| DBxref | PFAM:PF03006 |
| Product | Hemolysin-III related family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000010.1 | supercontig | NKJJ01000010.1:1122562..1123526 + |
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