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CAN33_14060-T1, CAN33_14060-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_14060-T1
Unique NameCAN33_14060-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000010.1:1209206..1210448-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_14060-T1 ID=CAN33_14060-T1|Name=CAN33_14060-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1243bp|location=Sequence derived from alignment at NKJJ01000010.1:1209206..1210448- (Aspergillus niger FDAARGOS_311)
ATGAAAGTGAGCTGCAACCAATCCGCCTTTAGTTTCCTTTCTCGCCCGCG
GCCTGAGGCCCATGCATGCCTGCCCGCTGACTTGTGTCGCAACGGTCTCT
GATTGGCTAGCGCGTGTCGCGTTGAACCAGTGAAAAAGACGCGTTTCAAT
TACCATTATTACTTGCCTTTCCCCTTCGGACTATCCGTCAATATTTCCAT
TTCGCTATCTTCAGTTCCACTTTCATCCTCGTTTGCCAATTCCTCCTAAT
GAACTGCCAATAACACCTATCCACCTCATATAACCTCTCGTATACGGAGT
ACTTCTCACGTATTCTATCATCACAATGCGAACCCGCTCCAGCGCTCCAT
CGGAGCAACCCCAATCTCCTCCATCCACCTCCGATCACCAAACAACAGCA
GCATCTACATCAGCTCTCCCAGCGCAATCCACCCCCAGAAAACCTTCATC
CTCCCCTCCACTGCCGGCGCCGACGCCCGCTTCCTCACCCTTCCCAACCC
GCGAACCGCCTCGCCAACCCGCTACTTCTTCGACCCCAAACTAGGCGTAT
ACGAATTCACCGTCCTCTCATCCCCTCCCACCGCACCGCGAAGCACCCTT
CTCGTGCGCAACCCCTATCCCACCTCATCATCCACATCCCAACCGCCAGC
GCACATCTCCAAGAAAGCCGAACTCCTCCTTGCCACCCCCATCGACATCC
TCTTCTTTCTCATTCCCATCCTCACCGCAAACACCAAACAAAACAACCTC
TTCCAACCCCTAGACGACATCATCGACTCGCTGGACGAGGAGCTCCTCCC
ACCTCACCTCCGCCATGTACTCTACGACGAAACCTTCCGCGGGACACTGC
ACGCCCGCGCCGCTGCGATAAGCGACTCCGTTGAAGCTGGCGACGAGAAG
ATGTTCCGGTTTAACGAGACGAAACTCCTCCAGGAACTTGTCGCCAAGGC
GGATAGAATGGTTAGCGTGGGGCTGCCTCCGAGTCTTGAGGAGAGATTTG
TGAGACAGGCGCTGGCGACGCCGCTGATGGCGGTGAAAAGAGATGATGTG
GTGGCTACGGGGGAGAATAAGGAGAATGAGGGCGAAGATGGCAAAGAGGA
GGGGGAGAAGACCACCGCGGATAATGAAGATGCAAAGGAGCACCTCCCCG
AAGGCTTGAAAGCTCCTGACGGCGTAGCAAACCTCCTCCGGATATCCACA
GCGCTGGCATTCATAAAAGAGTGCTATTTATCCAGAGAGATGA
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Coding sequence (CDS) from alignment at NKJJ01000010.1:1209206..1210448-

>CAN33_14060-T1 ID=CAN33_14060-T1|Name=CAN33_14060-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2529bp|location=Sequence derived from alignment at NKJJ01000010.1:1209206..1210448- (Aspergillus niger FDAARGOS_311)
AGATGACGCTCCATCGGAGCAACCCCAATCTCCTCCATCCACCTCCGATC
ACCAAACAACAGCAGCATCTACATCAGCTCTCCCAGCGCAATCCACCCCC
AGAAAACCTTCATCCTCCCCTCCACTGCCGGCGCCGACGCCCGCTTCCTC
ACCCTTCCCAACCCGCGAACCGCCTCGCCAACCCGCTACTTCTTCGACCC
CAAACTAGGCGTATACGAATTCACCGTCCTCTCATCCCCTCCCACCGCAC
CGCGAAGCACCCTTCTCGTGCGCAACCCCTATCCCACCTCATCATCCACA
TCCCAACCGCCAGCGCACATCTCCAAGAAAGCCGAACTCCTCCTTGCCAC
CCCCATCGACATCCTCTTCTTTCTCATTCCCATCCTCACCGCAAACACCA
AACAAAACAACCTCTTCCAACCCCTAGACGACATCATCGACTCGCTGGAC
GAGGAGCTCCTCCCACCTCACCTCCGCCATGTACTCTACGACGAAACCTT
CCGCGGGACACTGCACGCCCGCGCCGCTGCGATAAGCGACTCCGTTGAAG
CTGGCGACGAGAAGATGTTCCGGTTTAACGAGACGAAACTCCTCCAGGAA
CTTGTCGCCAAGGCGGATAGAATGGTTAGCGTGGGGCTGCCTCCGAGTCT
TGAGGAGAGATTTGTGAGACAGGCGCTGGCGACGCCGCTGATGGCGGTGA
AAAGAGATGATGTGGTGGCTACGGGGGAGAATAAGGAGAATGAGGGCGAA
GATGGCAAAGAGGAGGGGGAGAAGACCACCGCGGATAATGAAGATGCAAA
GGAGCACCTCCCCGAAGGCTTGAAAGCTCCTGACGGCATGAAAAGATGAC
GCTCCATCGGAGCAACCCCAATCTCCTCCATCCACCTCCGATCACCAAAC
AACAGCAGCATCTACATCAGCTCTCCCAGCGCAATCCACCCCCAGAAAAC
CTTCATCCTCCCCTCCACTGCCGGCGCCGACGCCCGCTTCCTCACCCTTC
CCAACCCGCGAACCGCCTCGCCAACCCGCTACTTCTTCGACCCCAAACTA
GGCGTATACGAATTCACCGTCCTCTCATCCCCTCCCACCGCACCGCGAAG
CACCCTTCTCGTGCGCAACCCCTATCCCACCTCATCATCCACATCCCAAC
CGCCAGCGCACATCTCCAAGAAAGCCGAACTCCTCCTTGCCACCCCCATC
GACATCCTCTTCTTTCTCATTCCCATCCTCACCGCAAACACCAAACAAAA
CAACCTCTTCCAACCCCTAGACGACATCATCGACTCGCTGGACGAGGAGC
TCCTCCCACCTCACCTCCGCCATGTACTCTACGACGAAACCTTCCGCGGG
ACACTGCACGCCCGCGCCGCTGCGATAAGCGACTCCGTTGAAGCTGGCGA
CGAGAAGATGTTCCGGTTTAACGAGACGAAACTCCTCCAGGAACTTGTCG
CCAAGGCGGATAGAATGGTTAGCGTGGGGCTGCCTCCGAGTCTTGAGGAG
AGATTTGTGAGACAGGCGCTGGCGACGCCGCTGATGGCGGTGAAAAGAGA
TGATGTGGTGGCTACGGGGGAGAATAAGGAGAATGAGGGCGAAGATGGCA
AAGAGGAGGGGGAGAAGACCACCGCGGATAATGAAGATGCAAAGGAGCAC
CTCCCCGAAGGCTTGAAAGCTCCTGACGGCATGAAAAGATGACGCTCCAT
CGGAGCAACCCCAATCTCCTCCATCCACCTCCGATCACCAAACAACAGCA
GCATCTACATCAGCTCTCCCAGCGCAATCCACCCCCAGAAAACCTTCATC
CTCCCCTCCACTGCCGGCGCCGACGCCCGCTTCCTCACCCTTCCCAACCC
GCGAACCGCCTCGCCAACCCGCTACTTCTTCGACCCCAAACTAGGCGTAT
ACGAATTCACCGTCCTCTCATCCCCTCCCACCGCACCGCGAAGCACCCTT
CTCGTGCGCAACCCCTATCCCACCTCATCATCCACATCCCAACCGCCAGC
GCACATCTCCAAGAAAGCCGAACTCCTCCTTGCCACCCCCATCGACATCC
TCTTCTTTCTCATTCCCATCCTCACCGCAAACACCAAACAAAACAACCTC
TTCCAACCCCTAGACGACATCATCGACTCGCTGGACGAGGAGCTCCTCCC
ACCTCACCTCCGCCATGTACTCTACGACGAAACCTTCCGCGGGACACTGC
ACGCCCGCGCCGCTGCGATAAGCGACTCCGTTGAAGCTGGCGACGAGAAG
ATGTTCCGGTTTAACGAGACGAAACTCCTCCAGGAACTTGTCGCCAAGGC
GGATAGAATGGTTAGCGTGGGGCTGCCTCCGAGTCTTGAGGAGAGATTTG
TGAGACAGGCGCTGGCGACGCCGCTGATGGCGGTGAAAAGAGATGATGTG
GTGGCTACGGGGGAGAATAAGGAGAATGAGGGCGAAGATGGCAAAGAGGA
GGGGGAGAAGACCACCGCGGATAATGAAGATGCAAAGGAGCACCTCCCCG
AAGGCTTGAAAGCTCCTGACGGCATGAAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0032299ribonuclease H2 complex
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_14060CAN33_14060Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_14060-T1CAN33_14060-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_14060-T1.cdsCAN33_14060-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_14060-T1.exon3CAN33_14060-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_14060-T1.exon2CAN33_14060-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_14060-T1.exon1CAN33_14060-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR040456
DBxrefInterPro:IPR041195
DBxrefInterPro:IPR019024
DBxrefPFAM:PF17745
DBxrefPFAM:PF09468
ProductRNase H2 complex component family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000010.1supercontigNKJJ01000010.1:1209206..1210448 -
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