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CAN33_14155-T1, CAN33_14155-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_14155-T1
Unique NameCAN33_14155-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000010.1:1275462..1276462-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_14155-T1 ID=CAN33_14155-T1|Name=CAN33_14155-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1001bp|location=Sequence derived from alignment at NKJJ01000010.1:1275462..1276462- (Aspergillus niger FDAARGOS_311)
ATGGATTCTCTTACGACCCATCCTTCTACCGCGCAGCAGGCCCGGGCCTT
CACTTCCCCCGCTTCTCTGTCCTTCCCCGGTGGTGCCGGCGATTTGACTC
CGCCTTCCGATAAAGACGGGAACATGGCGATGGCTCAGGGTGCGAATGGG
ATGATGAACGGTCAGCAGCAGGGAGGAAATGCCACTAATGGCAACGGGGT
GGCGCCCGCAACTCCAGCTGCGACTCCCGGTGCCAACACTCCGGGAAGTG
GCATTGTGCCTACGTTGCAGTGAGTATACTCTTGCTGTCTCTACTTCTGG
GTCACCAGATTACTGAACAATGATCTCTCTTTATTCTTTAAAGAAACATT
GTCGCGACGGTCAACCTTGACTGTCGTCTGGACTTGAAAACGATCGCACT
CCACGCAAGAAATGCGGAGTACAACCCTAAGGTATTACTTTCCACACCTC
CCTGTGCTTGATATGTCAGGGCATAGTGTGGCTGAACTGTTCTTTTTTTC
TTCCAATAGCGTTTCGCGGCCGTGATCATGCGTATCCGAGAGCCGAAGAC
GACCGCTTTGATCTTCGCCTCGGGCAAGATGGTGGTTACTGGTGCCAAGT
CGGAGGATGACTCCAAGCTGGCTTCCAGAAAGTACGCGCGTATCATCCAG
AAGCTTGGTTTCAATGCCAAGTTCACGGATTTCAAGATCCAGAACATCGT
GGGTTCTTGCGATATCAAGTTCCCCATCCGCCTGGAGGGTTTGGCCAGTC
GCCATCACAACTTCAGTTCCTACGAACCTGAGTTGTTCCCCGGTCTTATC
TACCGCATGATGAAGCCTAAGATCGTACTGCTTATCTTCGTCAGTGGAAA
GATCGTCCTCACTGGTGCTAAGGTCCGTGAGGAGATCTACCAGGCGTTCG
AACTGATCTATCCTGTGCTTTCGGGTATGCATCGCTCTCCTCGCTTCGGA
TCTGAAGTGGACCTCTTGCTAACCAGCTGTAAAGATTTCCGTAAAGTCTA
A
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Coding sequence (CDS) from alignment at NKJJ01000010.1:1275462..1276462-

>CAN33_14155-T1 ID=CAN33_14155-T1|Name=CAN33_14155-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3108bp|location=Sequence derived from alignment at NKJJ01000010.1:1275462..1276462- (Aspergillus niger FDAARGOS_311)
TCTAACGTTTCGCGGCCGTGATCATGCGTATCCGAGAGCCGAAGACGACC
GCTTTGATCTTCGCCTCGGGCAAGATGGTGGTTACTGGTGCCAAGTCGGA
GGATGACTCCAAGCTGGCTTCCAGAAAGTACGCGCGTATCATCCAGAAGC
TTGGTTTCAATGCCAAGTTCACGGATTTCAAGATCCAGAACATCGTGGGT
TCTTGCGATATCAAGTTCCCCATCCGCCTGGAGGGTTTGGCCAGTCGCCA
TCACAACTTCAGTTCCTACGAACCTGAGTTGTTCCCCGGTCTTATCTACC
GCATGATGAAGCCTAAGATCGTACTGCTTATCTTCGTCAGTGGAAAGATC
GTCCTCACTGGTGCTAAGGTCCGTGAGGAGATCTACCAGGCGTTCGAACT
GATCTATCCTGTGCTTTCGGAAACATTGTCGCGACGGTCAACCTTGACTG
TCGTCTGGACTTGAAAACGATCGCACTCCACGCAAGAAATGCGGAGTACA
ACCCTAAGATGGATTCTCTTACGACCCATCCTTCTACCGCGCAGCAGGCC
CGGGCCTTCACTTCCCCCGCTTCTCTGTCCTTCCCCGGTGGTGCCGGCGA
TTTGACTCCGCCTTCCGATAAAGACGGGAACATGGCGATGGCTCAGGGTG
CGAATGGGATGATGAACGGTCAGCAGCAGGGAGGAAATGCCACTAATGGC
AACGGGGTGGCGCCCGCAACTCCAGCTGCGACTCCCGGTGCCAACACTCC
GGGAAGTGGCATTGTGCCTACGTTGCATCTAACGTTTCGCGGCCGTGATC
ATGCGTATCCGAGAGCCGAAGACGACCGCTTTGATCTTCGCCTCGGGCAA
GATGGTGGTTACTGGTGCCAAGTCGGAGGATGACTCCAAGCTGGCTTCCA
GAAAGTACGCGCGTATCATCCAGAAGCTTGGTTTCAATGCCAAGTTCACG
GATTTCAAGATCCAGAACATCGTGGGTTCTTGCGATATCAAGTTCCCCAT
CCGCCTGGAGGGTTTGGCCAGTCGCCATCACAACTTCAGTTCCTACGAAC
CTGAGTTGTTCCCCGGTCTTATCTACCGCATGATGAAGCCTAAGATCGTA
CTGCTTATCTTCGTCAGTGGAAAGATCGTCCTCACTGGTGCTAAGGTCCG
TGAGGAGATCTACCAGGCGTTCGAACTGATCTATCCTGTGCTTTCGGAAA
CATTGTCGCGACGGTCAACCTTGACTGTCGTCTGGACTTGAAAACGATCG
CACTCCACGCAAGAAATGCGGAGTACAACCCTAAGATGGATTCTCTTACG
ACCCATCCTTCTACCGCGCAGCAGGCCCGGGCCTTCACTTCCCCCGCTTC
TCTGTCCTTCCCCGGTGGTGCCGGCGATTTGACTCCGCCTTCCGATAAAG
ACGGGAACATGGCGATGGCTCAGGGTGCGAATGGGATGATGAACGGTCAG
CAGCAGGGAGGAAATGCCACTAATGGCAACGGGGTGGCGCCCGCAACTCC
AGCTGCGACTCCCGGTGCCAACACTCCGGGAAGTGGCATTGTGCCTACGT
TGCATCTAACGTTTCGCGGCCGTGATCATGCGTATCCGAGAGCCGAAGAC
GACCGCTTTGATCTTCGCCTCGGGCAAGATGGTGGTTACTGGTGCCAAGT
CGGAGGATGACTCCAAGCTGGCTTCCAGAAAGTACGCGCGTATCATCCAG
AAGCTTGGTTTCAATGCCAAGTTCACGGATTTCAAGATCCAGAACATCGT
GGGTTCTTGCGATATCAAGTTCCCCATCCGCCTGGAGGGTTTGGCCAGTC
GCCATCACAACTTCAGTTCCTACGAACCTGAGTTGTTCCCCGGTCTTATC
TACCGCATGATGAAGCCTAAGATCGTACTGCTTATCTTCGTCAGTGGAAA
GATCGTCCTCACTGGTGCTAAGGTCCGTGAGGAGATCTACCAGGCGTTCG
AACTGATCTATCCTGTGCTTTCGGAAACATTGTCGCGACGGTCAACCTTG
ACTGTCGTCTGGACTTGAAAACGATCGCACTCCACGCAAGAAATGCGGAG
TACAACCCTAAGATGGATTCTCTTACGACCCATCCTTCTACCGCGCAGCA
GGCCCGGGCCTTCACTTCCCCCGCTTCTCTGTCCTTCCCCGGTGGTGCCG
GCGATTTGACTCCGCCTTCCGATAAAGACGGGAACATGGCGATGGCTCAG
GGTGCGAATGGGATGATGAACGGTCAGCAGCAGGGAGGAAATGCCACTAA
TGGCAACGGGGTGGCGCCCGCAACTCCAGCTGCGACTCCCGGTGCCAACA
CTCCGGGAAGTGGCATTGTGCCTACGTTGCATCTAACGTTTCGCGGCCGT
GATCATGCGTATCCGAGAGCCGAAGACGACCGCTTTGATCTTCGCCTCGG
GCAAGATGGTGGTTACTGGTGCCAAGTCGGAGGATGACTCCAAGCTGGCT
TCCAGAAAGTACGCGCGTATCATCCAGAAGCTTGGTTTCAATGCCAAGTT
CACGGATTTCAAGATCCAGAACATCGTGGGTTCTTGCGATATCAAGTTCC
CCATCCGCCTGGAGGGTTTGGCCAGTCGCCATCACAACTTCAGTTCCTAC
GAACCTGAGTTGTTCCCCGGTCTTATCTACCGCATGATGAAGCCTAAGAT
CGTACTGCTTATCTTCGTCAGTGGAAAGATCGTCCTCACTGGTGCTAAGG
TCCGTGAGGAGATCTACCAGGCGTTCGAACTGATCTATCCTGTGCTTTCG
GAAACATTGTCGCGACGGTCAACCTTGACTGTCGTCTGGACTTGAAAACG
ATCGCACTCCACGCAAGAAATGCGGAGTACAACCCTAAGATGGATTCTCT
TACGACCCATCCTTCTACCGCGCAGCAGGCCCGGGCCTTCACTTCCCCCG
CTTCTCTGTCCTTCCCCGGTGGTGCCGGCGATTTGACTCCGCCTTCCGAT
AAAGACGGGAACATGGCGATGGCTCAGGGTGCGAATGGGATGATGAACGG
TCAGCAGCAGGGAGGAAATGCCACTAATGGCAACGGGGTGGCGCCCGCAA
CTCCAGCTGCGACTCCCGGTGCCAACACTCCGGGAAGTGGCATTGTGCCT
ACGTTGCA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006352DNA-templated transcription, initiation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_14155CAN33_14155Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_14155-T1CAN33_14155-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_14155-T1.cdsCAN33_14155-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_14155-T1.exon4CAN33_14155-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_14155-T1.exon3CAN33_14155-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_14155-T1.exon2CAN33_14155-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_14155-T1.exon1CAN33_14155-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteBUSCO:EOG09264HTG
DBxrefInterPro:IPR033710
DBxrefInterPro:IPR030491
DBxrefInterPro:IPR012295
DBxrefInterPro:IPR000814
DBxrefPFAM:PF00352
ProductTranscription factor TFIID (or TATA-binding protein TBP) family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000010.1supercontigNKJJ01000010.1:1275462..1276462 -
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