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CAN33_14190-T1, CAN33_14190-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_14190-T1
Unique NameCAN33_14190-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000010.1:1305066..1306393-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_14190-T1 ID=CAN33_14190-T1|Name=CAN33_14190-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1328bp|location=Sequence derived from alignment at NKJJ01000010.1:1305066..1306393- (Aspergillus niger FDAARGOS_311)
ATGGCGGCCCCCGCTTTGTCGACCGGCGGTTTGATCGACCCGACCAAACA
GGCCGAGTATCCCATCGTGCTGGGCGACCGACTCAGTGGGAAATCCAGCT
CGCCACAGTCGCAGCTGGTCAATATCCAATATAACTACAAGACCAAGTCA
GCGACCGCACGGCAACGCATTACCCGAACCCGACAGTCCCGCGATCGTTA
CAACCTCACAATTACCGACAAAGCGCCCAACGCCGATAATGTCCTGACCT
ATTCATACCAAGGCAGTGTGGACCCAACACAATCTGTCTCGGATGTCGGG
GAACATAACTTGGTGCTAGTCTTTGACGCGGCGCGGAAAGTGTTTGTCTT
GGAGCCGGTTTCAACGCAGCTGAACTTCAACCTCCGGTCTGCTCCGGCCA
AATCCCAGAAGCAGGTACTAGAGCAATACGAACAGTTACGCACTTTGCAG
GAAGAGGACCATGGATCAGGTGATGATCGGGGCTCGGACAATGCCAGCGG
TAACGATGATGGCCCTGCTGACGACAGCAATCCCTATGACTACCGCCACT
TCCTCCCCAAGGAGAATGCGGACGATGACAAGTCGGGCTCGGATAAGACA
CCGGAACCCCCGTCCTACACCAGCAAGCTCGATACTCCGTTGATGTCCGC
TACCAGACCTATTCCTAGTCCTCGACCACCCCGGAGAGCCGGACAAAGCC
TGTCCACCCGAAGAAGAAGAAGCCAGACGGGGTCAAGCCTCCAAAACCGG
CGGCTGCTCGGCCACGGCCCAGGTCTCCGCCCCGTCCTGTGCAACCAAGA
GAGGAGCGGAAGGCAGAGGTCGAAGAGGAGCCTCCGGTGGAGACATTCAA
TTCCTCGCCGTCCGACACGGGCCTGGGGGCTGTCTCCTCTCAAAAGGCGG
TTCCATCACCGGGCTCGAATATCATCATCGACGGCGATCTAATCATCGAT
ATGGGATCTCCACCGCCTGCTCGTCCCTTCCGGGTCAATCCTGCATACTT
CTCTTCGAACCACACCCCGGCGGATGAGGAAGGAAATCGGGATGAGGACG
AGGAGCAGGAGGACGATGAGGATATTGAGGACCTACGGCTCCCCTCTCCG
GCTGGCCACGGAGGAGCGCCAATGGCTTCGAGCGGCATAAACCTGGAGCC
CGGGGTGGATGAGGAAGATTTGGAGGTTGATGATGATCCCCTCGCGGCGG
AGATGGAGGCGGCGTTTGAGGAGGATGTACAGGAAGACGACCGGAGCCAG
CCAGTTCCAACGCAAGCGGTGTCGCAGCAGTATCATATGGCCAGTGAGGA
CGAGAGTGAAGTCAGTGAGGAGGAATAG
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Coding sequence (CDS) from alignment at NKJJ01000010.1:1305066..1306393-

>CAN33_14190-T1 ID=CAN33_14190-T1|Name=CAN33_14190-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3564bp|location=Sequence derived from alignment at NKJJ01000010.1:1305066..1306393- (Aspergillus niger FDAARGOS_311)
GACCTACGGCTCCCCTCTCCGGCTGGCCACGGAGGAGCGCCAATGGCTTC
GAGCGGCATAAACCTGGAGCCCGGGGTGGATGAGGAAGATTTGGAGGTTG
ATGATGATCCCCTCGCGGCGGAGATGGAGGCGGCGTTTGAGGAGGATGTA
CAGGAAGACGACCGGAGCCAGCCAGTTCCAACGCAAGCGGTGTCGCAGCA
GTATCATATGGCCAGTGAGGACGAGAGTGAAGTCAGTGAGGAGGAATAGC
CGGACAAAGCCTGTCCACCCGAAGAAGAAGAAGCCAGACGGGGTCAAGCC
TCCAAAACCGGCGGCTGCTCGGCCACGGCCCAGGTCTCCGCCCCGTCCTG
TGCAACCAAGAGAGGAGCGGAAGGCAGAGGTCGAAGAGGAGCCTCCGGTG
GAGACATTCAATTCCTCGCCGTCCGACACGGGCCTGGGGGCTGTCTCCTC
TCAAAAGGCGGTTCCATCACCGGGCTCGAATATCATCATCGACGGCGATC
TAATCATCGATATGGGATCTCCACCGCCTGCTCGTCCCTTCCGGATGGCG
GCCCCCGCTTTGTCGACCGGCGGTTTGATCGACCCGACCAAACAGGCCGA
GTATCCCATCGTGCTGGGCGACCGACTCAGTGGGAAATCCAGCTCGCCAC
AGTCGCAGCTGGTCAATATCCAATATAACTACAAGACCAAGTCAGCGACC
GCACGGCAACGCATTACCCGAACCCGACAGTCCCGCGATCGTTACAACCT
CACAATTACCGACAAAGCGCCCAACGCCGATAATGTCCTGACCTATTCAT
ACCAAGGCAGTGTGGACCCAACACAATCTGTCTCGGATGTCGGGGAACAT
AACTTGGTGCTAGTCTTTGACGCGGCGCGGAAAGTGTTTGTCTTGGAGCC
GGTTTCAACGCAGCTGAACTTCAACCTCCGGTCTGCTCCGGCCAAATCCC
AGAAGCAGGTACTAGAGCAATACGAACAGTTACGCACTTTGCAGGAAGAG
GACCATGGATCAGGTGATGATCGGGGCTCGGACAATGCCAGCGGTAACGA
TGATGGCCCTGCTGACGACAGCAATCCCTATGACTACCGCCACTTCCTCC
CCAAGGAGAATGCGGACGATGACAAGTCGGGCTCGGATAAGACACCGGAA
CCCCCGTCCTACACCAGCAAGCTCGATACTCCGTTGATGACCTACGGCTC
CCCTCTCCGGCTGGCCACGGAGGAGCGCCAATGGCTTCGAGCGGCATAAA
CCTGGAGCCCGGGGTGGATGAGGAAGATTTGGAGGTTGATGATGATCCCC
TCGCGGCGGAGATGGAGGCGGCGTTTGAGGAGGATGTACAGGAAGACGAC
CGGAGCCAGCCAGTTCCAACGCAAGCGGTGTCGCAGCAGTATCATATGGC
CAGTGAGGACGAGAGTGAAGTCAGTGAGGAGGAATAGCCGGACAAAGCCT
GTCCACCCGAAGAAGAAGAAGCCAGACGGGGTCAAGCCTCCAAAACCGGC
GGCTGCTCGGCCACGGCCCAGGTCTCCGCCCCGTCCTGTGCAACCAAGAG
AGGAGCGGAAGGCAGAGGTCGAAGAGGAGCCTCCGGTGGAGACATTCAAT
TCCTCGCCGTCCGACACGGGCCTGGGGGCTGTCTCCTCTCAAAAGGCGGT
TCCATCACCGGGCTCGAATATCATCATCGACGGCGATCTAATCATCGATA
TGGGATCTCCACCGCCTGCTCGTCCCTTCCGGATGGCGGCCCCCGCTTTG
TCGACCGGCGGTTTGATCGACCCGACCAAACAGGCCGAGTATCCCATCGT
GCTGGGCGACCGACTCAGTGGGAAATCCAGCTCGCCACAGTCGCAGCTGG
TCAATATCCAATATAACTACAAGACCAAGTCAGCGACCGCACGGCAACGC
ATTACCCGAACCCGACAGTCCCGCGATCGTTACAACCTCACAATTACCGA
CAAAGCGCCCAACGCCGATAATGTCCTGACCTATTCATACCAAGGCAGTG
TGGACCCAACACAATCTGTCTCGGATGTCGGGGAACATAACTTGGTGCTA
GTCTTTGACGCGGCGCGGAAAGTGTTTGTCTTGGAGCCGGTTTCAACGCA
GCTGAACTTCAACCTCCGGTCTGCTCCGGCCAAATCCCAGAAGCAGGTAC
TAGAGCAATACGAACAGTTACGCACTTTGCAGGAAGAGGACCATGGATCA
GGTGATGATCGGGGCTCGGACAATGCCAGCGGTAACGATGATGGCCCTGC
TGACGACAGCAATCCCTATGACTACCGCCACTTCCTCCCCAAGGAGAATG
CGGACGATGACAAGTCGGGCTCGGATAAGACACCGGAACCCCCGTCCTAC
ACCAGCAAGCTCGATACTCCGTTGATGACCTACGGCTCCCCTCTCCGGCT
GGCCACGGAGGAGCGCCAATGGCTTCGAGCGGCATAAACCTGGAGCCCGG
GGTGGATGAGGAAGATTTGGAGGTTGATGATGATCCCCTCGCGGCGGAGA
TGGAGGCGGCGTTTGAGGAGGATGTACAGGAAGACGACCGGAGCCAGCCA
GTTCCAACGCAAGCGGTGTCGCAGCAGTATCATATGGCCAGTGAGGACGA
GAGTGAAGTCAGTGAGGAGGAATAGCCGGACAAAGCCTGTCCACCCGAAG
AAGAAGAAGCCAGACGGGGTCAAGCCTCCAAAACCGGCGGCTGCTCGGCC
ACGGCCCAGGTCTCCGCCCCGTCCTGTGCAACCAAGAGAGGAGCGGAAGG
CAGAGGTCGAAGAGGAGCCTCCGGTGGAGACATTCAATTCCTCGCCGTCC
GACACGGGCCTGGGGGCTGTCTCCTCTCAAAAGGCGGTTCCATCACCGGG
CTCGAATATCATCATCGACGGCGATCTAATCATCGATATGGGATCTCCAC
CGCCTGCTCGTCCCTTCCGGATGGCGGCCCCCGCTTTGTCGACCGGCGGT
TTGATCGACCCGACCAAACAGGCCGAGTATCCCATCGTGCTGGGCGACCG
ACTCAGTGGGAAATCCAGCTCGCCACAGTCGCAGCTGGTCAATATCCAAT
ATAACTACAAGACCAAGTCAGCGACCGCACGGCAACGCATTACCCGAACC
CGACAGTCCCGCGATCGTTACAACCTCACAATTACCGACAAAGCGCCCAA
CGCCGATAATGTCCTGACCTATTCATACCAAGGCAGTGTGGACCCAACAC
AATCTGTCTCGGATGTCGGGGAACATAACTTGGTGCTAGTCTTTGACGCG
GCGCGGAAAGTGTTTGTCTTGGAGCCGGTTTCAACGCAGCTGAACTTCAA
CCTCCGGTCTGCTCCGGCCAAATCCCAGAAGCAGGTACTAGAGCAATACG
AACAGTTACGCACTTTGCAGGAAGAGGACCATGGATCAGGTGATGATCGG
GGCTCGGACAATGCCAGCGGTAACGATGATGGCCCTGCTGACGACAGCAA
TCCCTATGACTACCGCCACTTCCTCCCCAAGGAGAATGCGGACGATGACA
AGTCGGGCTCGGATAAGACACCGGAACCCCCGTCCTACACCAGCAAGCTC
GATACTCCGTTGAT
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_14190CAN33_14190Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_14190-T1CAN33_14190-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_14190-T1.cdsCAN33_14190-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_14190-T1.exon3CAN33_14190-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_14190-T1.exon2CAN33_14190-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_14190-T1.exon1CAN33_14190-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR019194
DBxrefPFAM:PF09816
ProductRNA polymerase II transcription elongation factor family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000010.1supercontigNKJJ01000010.1:1305066..1306393 -
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