You are here

Home

CAN33_1420-T1, CAN33_1420-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_1420-T1
Unique NameCAN33_1420-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000004.1:827391..827983+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_1420-T1 ID=CAN33_1420-T1|Name=CAN33_1420-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=593bp|location=Sequence derived from alignment at NKJJ01000004.1:827391..827983+ (Aspergillus niger FDAARGOS_311)
ATGGCCTGGGGCTGGGGTAAGTTACATACCCTCCTTACACTTTTACCTTT
CCATCTGGCCTGACCAGGTTCCCCTGTCTTGTCCTTGGCCTCGTGCCTTC
ACCAACACGACGTTTATCAGGGCCTCCAATAGCTAACATGGATCTCTAGA
CCAATCCGACGACGCTCACCGTCAGGTGTACGAGAACAAGCACGAGGGTC
ACTTGTCCCACGAGCTCCTTGCCGGTGCCGCTTCCTTCGCGGGCATGAAG
GCCTGGGAGGACCACCAGCGCAAGCAGGGTATGAATGCCCCATTCAGAAC
CATTTCAGCCCTGGGGAGTTTGCCATGCTAACCACACCTGACCTATAGGC
AAGACCGTCAGCCACGCTTTCGCCAAGGAGGCCCTTGCCGCCGTTGTTGG
CGCTGAGGTCGACAAGCTCGCCGAGACCAAGGGCATGGACGAAGTTGACA
AGATCAAGGCCCGCGAGCACGCCAAGAAGAACGCTCACCACATGTACGAG
GAGCACTACGAGCGCCAGCACGGTGCTCCCGAGTTCGACCCCGGCCGCTT
CCCTCCCCCTGACCGCTTCGAGGGCCGTCGTGGTGGCTGGTAA
back to top

Coding sequence (CDS) from alignment at NKJJ01000004.1:827391..827983+

>CAN33_1420-T1 ID=CAN33_1420-T1|Name=CAN33_1420-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1170bp|location=Sequence derived from alignment at NKJJ01000004.1:827391..827983+ (Aspergillus niger FDAARGOS_311)
ATGGCCTGGGGCTGGGACCAATCCGACGACGCTCACCGTCAGGTGTACGA
GAACAAGCACGAGGGTCACTTGTCCCACGAGCTCCTTGCCGGTGCCGCTT
CCTTCGCGGGCATGAAGGCCTGGGAGGACCACCAGCGCAAGCAGGGCAAG
ACCGTCAGCCACGCTTTCGCCAAGGAGGCCCTTGCCGCCGTTGTTGGCGC
TGAGGTCGACAAGCTCGCCGAGACCAAGGGCATGGACGAAGTTGACAAGA
TCAAGGCCCGCGAGCACGCCAAGAAGAACGCTCACCACATGTACGAGGAG
CACTACGAGCGCCAGCACGGTGCTCCCGAGTTCGACCCCGGCCGCTTCCC
TCCCCCTGACCGCTTCGAGGGCCGTCGTGGTGGCTGGTAAATGGCCTGGG
GCTGGGACCAATCCGACGACGCTCACCGTCAGGTGTACGAGAACAAGCAC
GAGGGTCACTTGTCCCACGAGCTCCTTGCCGGTGCCGCTTCCTTCGCGGG
CATGAAGGCCTGGGAGGACCACCAGCGCAAGCAGGGCAAGACCGTCAGCC
ACGCTTTCGCCAAGGAGGCCCTTGCCGCCGTTGTTGGCGCTGAGGTCGAC
AAGCTCGCCGAGACCAAGGGCATGGACGAAGTTGACAAGATCAAGGCCCG
CGAGCACGCCAAGAAGAACGCTCACCACATGTACGAGGAGCACTACGAGC
GCCAGCACGGTGCTCCCGAGTTCGACCCCGGCCGCTTCCCTCCCCCTGAC
CGCTTCGAGGGCCGTCGTGGTGGCTGGTAAATGGCCTGGGGCTGGGACCA
ATCCGACGACGCTCACCGTCAGGTGTACGAGAACAAGCACGAGGGTCACT
TGTCCCACGAGCTCCTTGCCGGTGCCGCTTCCTTCGCGGGCATGAAGGCC
TGGGAGGACCACCAGCGCAAGCAGGGCAAGACCGTCAGCCACGCTTTCGC
CAAGGAGGCCCTTGCCGCCGTTGTTGGCGCTGAGGTCGACAAGCTCGCCG
AGACCAAGGGCATGGACGAAGTTGACAAGATCAAGGCCCGCGAGCACGCC
AAGAAGAACGCTCACCACATGTACGAGGAGCACTACGAGCGCCAGCACGG
TGCTCCCGAGTTCGACCCCGGCCGCTTCCCTCCCCCTGACCGCTTCGAGG
GCCGTCGTGGTGGCTGGTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_1420CAN33_1420Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_1420-T1.exon1CAN33_1420-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_1420-T1.exon2CAN33_1420-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_1420-T1.exon3CAN33_1420-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_1420-T1.cdsCAN33_1420-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_1420-T1CAN33_1420-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR022234
DBxrefPFAM:PF12585
ProductProtein of unknown function (DUF3759) family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000004.1supercontigNKJJ01000004.1:827391..827983 +
Powered by Drupal