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CAN33_14285-T1, CAN33_14285-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_14285-T1
Unique NameCAN33_14285-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000010.1:1374936..1377284-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_14285-T1 ID=CAN33_14285-T1|Name=CAN33_14285-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2349bp|location=Sequence derived from alignment at NKJJ01000010.1:1374936..1377284- (Aspergillus niger FDAARGOS_311)
ATGGATTCCACAGCGGATTTTGGCTCGTTACAGCAACGGGTGCAGTCGTC
CCTGATGCAGGTGACGCGCACTGCCGGTCAACTTTCAGCCGAAGATCTCG
ATTTCCATCGCACCTCTAACGCAGAGGTTTCTGATTCCCTGGACGAGCAG
AGCAACCGACTCTTGTCGCTCACTTCTTCTATTTTGAAAGCCGCCACCGC
CGGAACCGATGTTTCTGCACCGACCTTAGACGACGAAGATTCCCTCGAAG
ATAATTGGCGCGGCGTCGTGGATGTCATCGATGCGCTATTGGAAAAGGCC
GACGCATGCTTGGATGAATTCACCGGTGTTATTAAGAAATTGAGCCCGTC
GCAACAGGATCAAGCTGCCGCTGCCGCTGCGAAGGCTTCGAAGAAGCAAC
CCGCTAAATTCCCGACCATTTACGACTACGGCCCGTCGAAGATCCCGAAG
CCGCAATTGCTGTTCGAACGCAAGGCCGATAACACCGATACCGCGCCTTT
CAAGCCTTTGCTTAAGACGAAGCCTCATGCCGTTGTTCCGCTGAAAGACT
CGTTAAAGTTGTCCGATTCCGCTGTCGGATATGTCAACCCGTACGAGAAG
GAGATTCGTGCCGCAAAGTTCCCCACTTCTTCCTACAGCGTGTCGCCGCC
TGTGGATTATCAGCCGTGGGAGTCGACAAAGGCGACTTTTGTGGATACTC
TGGAGGGAGTGAAGGAGATGTTGGAGGAACTTAAGGCCGCGAAGGAGATC
GCGATTGATTTGGAGCATCACGATGTGCACTCGTATCAGGGTCTTGTCTC
CTTGATGCAGATCAGCACTCGGGATAAGGATTGGGTTGTTGATACGCTTA
AGCCGTGGAGGGAGGAGCTGCAAGTTCTTAACGAAGTGTTCACGGATCCC
AACATCTTGAAGGTGCTTCACGGTTCCTCGATGGATATTATCTGGCTTCA
GCGCGACTTGGGGCTGTACGTCGTTGGCATGTTCGATACATACCATGCTG
CTTGCGCGTTGAACTACCCCAAGCGCAGTTTGAAGTTCCTGCTGCAGAAG
TTTGTCAACTTCGAAGCCGATAAACGTTACCAGATGGCCGACTGGCGCAT
TCGACCGATCCCGGAAGGCATGTTCGATTACGCTCGTTCGGATACTCACT
ACCTTCTTCACATCTACGACCACATTCGCAACGAACTTGTCGAAAACTCC
CTCCCCGACAACAACCTTATCGACTACGTCCTGGAGCAGTCTAAGAAGGA
AGCTCTGCAAGTATATGAGCGTCCTGTTTACGATGCTGCTACTGGTCAAG
GACCGGGTGGTTGGTACGACCTCCTTTCTCGCAATTCGGTCGTGGTCAAC
AGGGAACAGTTTGCCGTATTCAAAGCAGTACATCAGTGGCGTGACGAGGT
TGCTAGAGAGGAAGACGAGGGCGTGCAATGCGTGTTCCCGAAACACGTTC
TCTTCAGGGTTGCTCACACTATGCCGCTCGACTTGGGCACCCTGTTCCGG
ACATTGTCACCTGTGACACCAATTGTCCAAAACCGCGCTGTAGACCTTTT
GGAAGTCATCAAGAAGGCTAAGGATGAGGGCGCTGATGGCCCTGAATGGC
GTGACGTCTACGTCAAGCCAACCAGGGGTACACCGGCCGCGCCGGCGACA
CAGCCAGTCGATGTCCCGTCCCCGACCCCAGCAGACGAGGCCAATCTCCC
CACTGTTTCTCGCTACGAGGTCTCCCAATTCTGGGGTTCCGTGTTGGAGT
CACAAGAACCTCCCACGGTCCCTGCATACTCCGCCGTTGCTTCAGCCGAA
GCTCTCCGTCTCTCCCTCCCCCTTCCGCCTATGCCTAAAACCGTCTCCGA
AGCCCGCGAAAAGCTCGCACCCGCTCAACCTCAAACCCCGAAACCCGCTA
CCTCTGCACCCGCCGTTAAGGAAGAGAAGAAAGAGGACGAGAACAAGTAC
TTCACCGTCAAGGAAATGGGTGGACCACGTAAGCGCAAGGCCGCCCCCGC
AGAGACGGCCGAGCAATTGCAGTCCGCCTCATCGGATTTCGACACCACTG
ACGCCAGTTCCTCGTTGGACACTGAAGATAAGCCATCCAAGAAACAGCGC
CGCAAGGAGAAGAAGAACAAGCCCGCAGCACAACCCGAGACAGCTGCCGA
GGAGGACGGAGAAGAGGAGGAAGAGGAGGCTCCCTTCAACTACGAGTCCG
CTGCCTCTGTATTCAATGCCAACCCCAAGGCTACTTCGGGACTCCCGTCC
AGGCGTCGTTATAATCCCTATGCTAAGGTGCTCGATGCCCCGTCGGGAGT
GCGGAAGCAGAAACGCGAGACTGCCGGAAAGGCGTTTACGTTCCGGTGA
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Coding sequence (CDS) from alignment at NKJJ01000010.1:1374936..1377284-

>CAN33_14285-T1 ID=CAN33_14285-T1|Name=CAN33_14285-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4320bp|location=Sequence derived from alignment at NKJJ01000010.1:1374936..1377284- (Aspergillus niger FDAARGOS_311)
GCGTCGTTATAATCCCTATGCTAAGGTGCTCGATGCCCCGTCGGGAGTGC
GGAAGCAGAAACGCGAGACTGCCGGAAAGGCGTTTACGTTCCGGTGAATG
GATTCCACAGCGGATTTTGGCTCGTTACAGCAACGGGTGCAGTCGTCCCT
GATGCAGGTGACGCGCACTGCCGGTCAACTTTCAGCCGAAGATCTCGATT
TCCATCGCACCTCTAACGCAGAGGTTTCTGATTCCCTGGACGAGCAGAGC
AACCGACTCTTGTCGCTCACTTCTTCTATTTTGAAAGCCGCCACCGCCGG
AACCGATGTTTCTGCACCGACCTTAGACGACGAAGATTCCCTCGAAGATA
ATTGGCGCGGCGTCGTGGATGTCATCGATGCGCTATTGGAAAAGGCCGAC
GCATGCTTGGATGAATTCACCGGTGTTATTAAGAAATTGAGCCCGTCGCA
ACAGGATCAAGCTGCCGCTGCCGCTGCGAAGGCTTCGAAGAAGCAACCCG
CTAAATTCCCGACCATTTACGACTACGGCCCGTCGAAGATCCCGAAGCCG
CAATTGCTGTTCGAACGCAAGGCCGATAACACCGATACCGCGCCTTTCAA
GCCTTTGCTTAAGACGAAGCCTCATGCCGTTGTTCCGCTGAAAGACTCGT
TAAAGTTGTCCGATTCCGCTGTCGGATATGTCAACCCGTACGAGAAGGAG
ATTCGTGCCGCAAAGTTCCCCACTTCTTCCTACAGCGTGTCGCCGCCTGT
GGATTATCAGCCGTGGGAGTCGACAAAGGCGACTTTTGTGGATACTCTGG
AGGGAGTGAAGGAGATGTTGGAGGAACTTAAGGCCGCGAAGGAGATCGCG
ATTGATTTGGAGCATCACGATGTGCACTCGTATCAGGGTCTTGTCTCCTT
GATGCAGATCAGCACTCGGGATAAGGATTGGGTTGTTGATACGCTTAAGC
CGTGGAGGGAGGAGCTGCAAGTTCTTAACGAAGTGTTCACGGATCCCAAC
ATCTTGAAGGTGCTTCACGGTTCCTCGATGGATATTATCTGGCTTCAGCG
CGACTTGGGGCTGTACGTCGTTGGCATGTTCGATACATACCATGCTGCTT
GCGCGTTGAACTACCCCAAGCGCAGTTTGAAGTTCCTGCTGCAGAAGTTT
GTCAACTTCGAAGCCGATAAACGTTACCAGATGGCCGACTGGCGCATTCG
ACCGATCCCGGAAGGCATGTTCGATTACGCTCGTTCGGATACTCACTACC
TTCTTCACATCTACGACCACATTCGCAACGAACTTGTCGAAAACTCCCTC
CCCGACAACAACCTTATCGACTACGTCCTGGAGCAGTCTAAGAAGGAAGC
TCTGCAAGTATATGAGCGTCCTGTTTACGATGCTGCTACTGGTCAAGGAC
CGGGTGGTTGGTACGACCTCCTTTCTCGCAATTCGGTCGTGGTCAACAGG
GAACAGTTTGCCGTATTCAAAGCAGTACATCAGTGGCGTGACGAGGTTGC
TAGAGAGGAAGACGAGGGCGTGCAATGCGTGTTCCCGAAACACGTTCTCT
TCAGGGTTGCTCACACTATGCCGCTCGACTTGGGCACCCTGTTCCGGACA
TTGTCACCTGTGACACCAATTGTCCAAAACCGCGCTGTAGACCTTTTGGA
AGTCATCAAGAAGGCTAAGGATGAGGGCGCTGATGGCCCTGAATGGCGTG
ACGTCTACGTCAAGCCAACCAGGGGTACACCGGCCGCGCCGGCGACACAG
CCAGTCGATGTCCCGTCCCCGACCCCAGCAGACGAGGCCAATCTCCCCAC
TGTTTCTCGCTACGAGGTCTCCCAATTCTGGGGTTCCGTGTTGGAGTCAC
AAGAACCTCCCACGGTCCCTGCATACTCCGCCGTTGCTTCAGCCGAAGCT
CTCCGTCTCTCCCTCCCCCTTCCGCCTATGCCTAAAACCGTCTCCGAAGC
CCGCGAAAAGCTCGCACCCGCTCAACCTCAAACCCCGAAACCCGCTACCT
CTGCACCCGCCGTTAAGGAAGAGAAGAAAGAGGACGAGAACAAGTACTTC
ACCGTCAAGGAAATGGGTGGACCACGTAAGCGCAAGGCCGCCCCCGCAGA
GACGGCCGAGCAATTGCAGTCCGCCTCATCGGATTTCGACACCACTGACG
CCAGTTCCTCGCGTCGTTATAATCCCTATGCTAAGGTGCTCGATGCCCCG
TCGGGAGTGCGGAAGCAGAAACGCGAGACTGCCGGAAAGGCGTTTACGTT
CCGGTGAATGGATTCCACAGCGGATTTTGGCTCGTTACAGCAACGGGTGC
AGTCGTCCCTGATGCAGGTGACGCGCACTGCCGGTCAACTTTCAGCCGAA
GATCTCGATTTCCATCGCACCTCTAACGCAGAGGTTTCTGATTCCCTGGA
CGAGCAGAGCAACCGACTCTTGTCGCTCACTTCTTCTATTTTGAAAGCCG
CCACCGCCGGAACCGATGTTTCTGCACCGACCTTAGACGACGAAGATTCC
CTCGAAGATAATTGGCGCGGCGTCGTGGATGTCATCGATGCGCTATTGGA
AAAGGCCGACGCATGCTTGGATGAATTCACCGGTGTTATTAAGAAATTGA
GCCCGTCGCAACAGGATCAAGCTGCCGCTGCCGCTGCGAAGGCTTCGAAG
AAGCAACCCGCTAAATTCCCGACCATTTACGACTACGGCCCGTCGAAGAT
CCCGAAGCCGCAATTGCTGTTCGAACGCAAGGCCGATAACACCGATACCG
CGCCTTTCAAGCCTTTGCTTAAGACGAAGCCTCATGCCGTTGTTCCGCTG
AAAGACTCGTTAAAGTTGTCCGATTCCGCTGTCGGATATGTCAACCCGTA
CGAGAAGGAGATTCGTGCCGCAAAGTTCCCCACTTCTTCCTACAGCGTGT
CGCCGCCTGTGGATTATCAGCCGTGGGAGTCGACAAAGGCGACTTTTGTG
GATACTCTGGAGGGAGTGAAGGAGATGTTGGAGGAACTTAAGGCCGCGAA
GGAGATCGCGATTGATTTGGAGCATCACGATGTGCACTCGTATCAGGGTC
TTGTCTCCTTGATGCAGATCAGCACTCGGGATAAGGATTGGGTTGTTGAT
ACGCTTAAGCCGTGGAGGGAGGAGCTGCAAGTTCTTAACGAAGTGTTCAC
GGATCCCAACATCTTGAAGGTGCTTCACGGTTCCTCGATGGATATTATCT
GGCTTCAGCGCGACTTGGGGCTGTACGTCGTTGGCATGTTCGATACATAC
CATGCTGCTTGCGCGTTGAACTACCCCAAGCGCAGTTTGAAGTTCCTGCT
GCAGAAGTTTGTCAACTTCGAAGCCGATAAACGTTACCAGATGGCCGACT
GGCGCATTCGACCGATCCCGGAAGGCATGTTCGATTACGCTCGTTCGGAT
ACTCACTACCTTCTTCACATCTACGACCACATTCGCAACGAACTTGTCGA
AAACTCCCTCCCCGACAACAACCTTATCGACTACGTCCTGGAGCAGTCTA
AGAAGGAAGCTCTGCAAGTATATGAGCGTCCTGTTTACGATGCTGCTACT
GGTCAAGGACCGGGTGGTTGGTACGACCTCCTTTCTCGCAATTCGGTCGT
GGTCAACAGGGAACAGTTTGCCGTATTCAAAGCAGTACATCAGTGGCGTG
ACGAGGTTGCTAGAGAGGAAGACGAGGGCGTGCAATGCGTGTTCCCGAAA
CACGTTCTCTTCAGGGTTGCTCACACTATGCCGCTCGACTTGGGCACCCT
GTTCCGGACATTGTCACCTGTGACACCAATTGTCCAAAACCGCGCTGTAG
ACCTTTTGGAAGTCATCAAGAAGGCTAAGGATGAGGGCGCTGATGGCCCT
GAATGGCGTGACGTCTACGTCAAGCCAACCAGGGGTACACCGGCCGCGCC
GGCGACACAGCCAGTCGATGTCCCGTCCCCGACCCCAGCAGACGAGGCCA
ATCTCCCCACTGTTTCTCGCTACGAGGTCTCCCAATTCTGGGGTTCCGTG
TTGGAGTCACAAGAACCTCCCACGGTCCCTGCATACTCCGCCGTTGCTTC
AGCCGAAGCTCTCCGTCTCTCCCTCCCCCTTCCGCCTATGCCTAAAACCG
TCTCCGAAGCCCGCGAAAAGCTCGCACCCGCTCAACCTCAAACCCCGAAA
CCCGCTACCTCTGCACCCGCCGTTAAGGAAGAGAAGAAAGAGGACGAGAA
CAAGTACTTCACCGTCAAGGAAATGGGTGGACCACGTAAGCGCAAGGCCG
CCCCCGCAGAGACGGCCGAGCAATTGCAGTCCGCCTCATCGGATTTCGAC
ACCACTGACGCCAGTTCCTC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000176nuclear exosome (RNase complex)
Vocabulary: Biological Process
TermDefinition
GO:0044237cellular metabolic process
GO:0006396RNA processing
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0003824catalytic activity
GO:0003676nucleic acid binding
GO:00084083'-5' exonuclease activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_14285CAN33_14285Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_14285-T1CAN33_14285-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_14285-T1.cdsCAN33_14285-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_14285-T1.exon2CAN33_14285-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_14285-T1.exon1CAN33_14285-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteBUSCO:EOG0926158Y
DBxrefInterPro:IPR012337
DBxrefInterPro:IPR010997
DBxrefInterPro:IPR012588
DBxrefInterPro:IPR002121
DBxrefInterPro:IPR002562
DBxrefPFAM:PF08066
DBxrefPFAM:PF00570
DBxrefPFAM:PF01612
Product3'-5' exonuclease family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000010.1supercontigNKJJ01000010.1:1374936..1377284 -
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