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CAN33_14305-T1, CAN33_14305-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_14305-T1
Unique NameCAN33_14305-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000010.1:1381823..1384731-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_14305-T1 ID=CAN33_14305-T1|Name=CAN33_14305-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2909bp|location=Sequence derived from alignment at NKJJ01000010.1:1381823..1384731- (Aspergillus niger FDAARGOS_311)
ATGTCATCTCGACCAGATCTCAAGGTAAGCTCTACCTGTTTTAGGAACTT
AAGAAGAGAAAAATCGGCTAACATTAAACTAATTACACTGTCTAGGTGGA
CGACGAAGTCGGCTTCATCCGCTTCTATCGTTCCATTTCCTCCTCCTCTG
ACAATGACAACAACAACAATGAGACCATTCGAGTTTTCGACCGCGGAGAC
TGGTACTCCGCCCACGGTGCCGAAGCTGAATTCATCGCCCGCACCGTCTA
CAAAACCACCTCTGTGATCCGCAATCTGGGCCGCAGCGACACAGGCGGCC
TGCCCTCCGTGACGATGAGCGTGACTGTATTCCGCAATTTCTTACGCGAG
GCGCTATTCCGACTCAATCGGCGAGTGGAGATCTGGGGCTCTGCGAGCGG
GCGCGGCGGACAGTGGAAGCTCATTAAGCAGGCGAGTCCGGGGAACTTGC
AGGATGTGGAAGAAGAACTGGGGAGTGTAGGTGGGCTGAATATTGAGGCT
GGAGCGCCGATCATTCTGGCTGTGAAGATTTCTGCAAAGGCCGGGGAGGC
GAGAAGTGTGGGGGTTTGTTTTGCGGATGCGAGTGTAAGGGAGTTGGGTG
TGAGTGAATTCTTGGATAATGATGTTTATTCGAATCTGGAGTCGCTGGTC
ATTCAGCTGGGGGTGAAGGAGTGTCTTGTGCAGATGGATGCGGGGAGGAA
GGATGTGGAATTGGGGAAGGTGAGGAATATCATGGATAGTTGTGGGATTG
CCGTGTCGGAGAGGCACAGCGGTGATTTCGGGGTTAGGGATATCGAGCAG
GACTTGACGAGGTTGTTGAGGGATGAGAGGTCTGCCGGGACGCTGCCTCA
GACTGAGTTGAAGTTGGCGATGGGATCCGCGGCGGCGTTGATCAAGTATC
TGGGTGTTATGACGGATCCGTCCAACTTCGGCCAGTATCGTCTCTATCAG
CATGATCTGTCGCAATTCATGAAGCTGGATTCGTCGGCGCTGAGGGCGTT
GAATCTCATGCCGGGTCCGCGGGACGGATCTAAGTCGATGAGTTTGTTTG
GGTTGCTGAATCATTGTAAGACGCCGGTGGGCAGCAGGCTGCTGGCGCAG
TGGTTGAAGCAGCCGCTAATGGATAAAGCTGAGATTGAGAAGAGACAGCA
GCTGGTGGAGTCGTTTGTGATGGACACGGAACTTCGGCAGACTATGCAGG
AGGAGCATTTGCGCTCGATCCCGGATTTGTATCGCTTGGCGAAGCGGTTT
CAGAGGAAGCAGGCGACACTGGAGGATGTCGTGCGTGTTTATCAGGTTGC
CATTCGCCTGCCAGGCTTTGTTGCGTCACTGGAGAATGTGATGGATGAAC
AGTATCAGACGCCTCTGGAAGCGGAGTATACGTCCAAGCTGCGCAGCCAT
TCCGATAACCTGGCAAAGCTGGAGGAGATGGTTGAGACGACGGTGGACTT
GGATGCATTGGAGAACCACGAGTTCATTATTAAGCCGGAGTTTGATGAGA
GCTTGCGCATCATTCGCAAGAAGCTGGATAAGCTGCGTCACGACATGGAC
TCGGAACACCGTCGTGTGGGCCGGGATCTGGACCAAGAAGTTGACAAGAA
GCTGTTCCTGGAGAATCATCGTGTGCATGGCTGGTGCTTCCGATTGACTC
GCAACGAGGCGGGCTGTATTCGCAACAAAAGAGAGTACCAGGAGTGCTCA
ACTCAGAAGAACGGTGTCTACTTTACGACCTCGACAATGCAGGCGCTCCG
TCGCGAGCACGACCAGCTGTCATCTAACTACAATCGCACTCAGACTGGTT
TGGTTAGCGAGGTTGTTGGTGTGGCTGCCTCCTACTGCCCTGTCCTTGAG
CAGCTTGCTGGCGTTTTGGCTCACCTCGATGTCATTGTGAGCTTCGCGCA
TTGTGCCGTGCACGCCCCTACACCATATGTCCGTCCCAAGATTCACCCGC
GTGGTACTGGAAACACGGTTCTGAAGGAGGCCCGGCATCCTTGTATGGAA
ATGCAGGATGACATCTCTTTTATCACCAACGACGTGTCGCTCATCCGTGA
TGAGTCTTCCTTCCTGATCATTACCGGTCCCAATATGGGTGGTAAATCGA
CCTACATCCGACAGATTGGCGTCATTGCGCTGATGGCCCAGACTGGATGC
TTCGTGCCATGCTCCGAGGCGGAGCTGACTATTTTCGACTGCATTCTTGC
TCGTGTTGGTGCGAGTGACTCGCAGCTCAAGGGTGTGTCGACTTTCATGG
CTGAGATGCTTGAGACCTCCAACATCCTCAAGTCCGCGACCTCGGAGTCA
TTGATCATCATCGATGAACTTGGTCGCGGAACAAGTACATACGATGGATT
CGGCCTTGCATGGGCTATCTCAGAGCACATCGTCACTGAGATTCGCTGTT
TCGGCCTGTTCGCAACCCACTTCCACGAATTGACGGCCCTGGCCGATCGG
TACCCGAAGTCAGCCAAGAACCTACATGTAGTGGCTTTTATTGGTGATGG
CACGGGCAATGAGGAGGACAGCAAAGACTCGAAGCGAGACCAGGTTACGT
TGCTGTACCGTGTCGAACCGGGCATCTGCGACCAGTCCTTCGGTATTCAC
GTTGCTGAATTGGTCCGCTTTCCGGAGAAGGTAGTCAACATGGCGCGACA
AAAGGCAGATGAGCTTGAGGACTTCACCTCCTCTGGGGCACAGGAAAAAG
AGTCCATGTCACTTGACAAGTACTCCCAGGAAGAAGTTGAAGAGGGCAGT
GCTCTCCTCAAGGATATGTTGCTGAAATGGAAGGAAGCTATTGAGGCACC
TGGCAAGGACCTGACGGTTGAAGAAAAGCGCCAGATCATGCGCGATCTTG
TCAACAGTGATCCGAAGTTACAGGCGAACAAAGTGTTCCAGGGCATCAAA
GCTTTGTAG
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Coding sequence (CDS) from alignment at NKJJ01000010.1:1381823..1384731-

>CAN33_14305-T1 ID=CAN33_14305-T1|Name=CAN33_14305-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5676bp|location=Sequence derived from alignment at NKJJ01000010.1:1381823..1384731- (Aspergillus niger FDAARGOS_311)
GTGGACGACGAAGTCGGCTTCATCCGCTTCTATCGTTCCATTTCCTCCTC
CTCTGACAATGACAACAACAACAATGAGACCATTCGAGTTTTCGACCGCG
GAGACTGGTACTCCGCCCACGGTGCCGAAGCTGAATTCATCGCCCGCACC
GTCTACAAAACCACCTCTGTGATCCGCAATCTGGGCCGCAGCGACACAGG
CGGCCTGCCCTCCGTGACGATGAGCGTGACTGTATTCCGCAATTTCTTAC
GCGAGGCGCTATTCCGACTCAATCGGCGAGTGGAGATCTGGGGCTCTGCG
AGCGGGCGCGGCGGACAGTGGAAGCTCATTAAGCAGGCGAGTCCGGGGAA
CTTGCAGGATGTGGAAGAAGAACTGGGGAGTGTAGGTGGGCTGAATATTG
AGGCTGGAGCGCCGATCATTCTGGCTGTGAAGATTTCTGCAAAGGCCGGG
GAGGCGAGAAGTGTGGGGGTTTGTTTTGCGGATGCGAGTGTAAGGGAGTT
GGGTGTGAGTGAATTCTTGGATAATGATGTTTATTCGAATCTGGAGTCGC
TGGTCATTCAGCTGGGGGTGAAGGAGTGTCTTGTGCAGATGGATGCGGGG
AGGAAGGATGTGGAATTGGGGAAGGTGAGGAATATCATGGATAGTTGTGG
GATTGCCGTGTCGGAGAGGCACAGCGGTGATTTCGGGGTTAGGGATATCG
AGCAGGACTTGACGAGGTTGTTGAGGGATGAGAGGTCTGCCGGGACGCTG
CCTCAGACTGAGTTGAAGTTGGCGATGGGATCCGCGGCGGCGTTGATCAA
GTATCTGGGTGTTATGACGGATCCGTCCAACTTCGGCCAGTATCGTCTCT
ATCAGCATGATCTGTCGCAATTCATGAAGCTGGATTCGTCGGCGCTGAGG
GCGTTGAATCTCATGCCGGGTCCGCGGGACGGATCTAAGTCGATGAGTTT
GTTTGGGTTGCTGAATCATTGTAAGACGCCGGTGGGCAGCAGGCTGCTGG
CGCAGTGGTTGAAGCAGCCGCTAATGGATAAAGCTGAGATTGAGAAGAGA
CAGCAGCTGGTGGAGTCGTTTGTGATGGACACGGAACTTCGGCAGACTAT
GCAGGAGGAGCATTTGCGCTCGATCCCGGATTTGTATCGCTTGGCGAAGC
GGTTTCAGAGGAAGCAGGCGACACTGGAGGATGTCGTGCGTGTTTATCAG
GTTGCCATTCGCCTGCCAGGCTTTGTTGCGTCACTGGAGAATGTGATGGA
TGAACAGTATCAGACGCCTCTGGAAGCGGAGTATACGTCCAAGCTGCGCA
GCCATTCCGATAACCTGGCAAAGCTGGAGGAGATGGTTGAGACGACGGTG
GACTTGGATGCATTGGAGAACCACGAGTTCATTATTAAGCCGGAGTTTGA
TGAGAGCTTGCGCATCATTCGCAAGAAGCTGGATAAGCTGCGTCACGACA
TGGACTCGGAACACCGTCGTGTGGGCCGGGATCTGGACCAAGAAGTTGAC
AAGAAGCTGTTCCTGGAGAATCATCGTGTGCATGGCTGGTGCTTCCGATT
GACTCGCAACGAGGCGGGCTGTATTCGCAACAAAAGAGAGTACCAGGAGT
GCTCAACTCAGAAGAACGGTGTCTACTTTACGACCTCGACAATGCAGGCG
CTCCGTCGCGAGCACGACCAGCTGTCATCTAACTACAATCGCACTCAGAC
TGGTTTGGTTAGCGAGGTTGTTGGTGTGGCTGCCTCCTACTGCCCTGTCC
TTGAGCAGCTTGCTGGCGTTTTGGCTCACCTCGATGTCATTGTGAGCTTC
GCGCATTGTGCCGTGCACGCCCCTACACCATATGTCCGTCCCAAGATTCA
CCCGCGTGGTACTGGAAACACGGTTCTGAAGGAGGCCCGGCATCCTTGTA
TGGAAATGCAGGATGACATCTCTTTTATCACCAACGACGTGTCGCTCATC
CGTGATGAGTCTTCCTTCCTGATCATTACCGGTCCCAATATGGGTGGTAA
ATCGACCTACATCCGACAGATTGGCGTCATTGCGCTGATGGCCCAGACTG
GATGCTTCGTGCCATGCTCCGAGGCGGAGCTGACTATTTTCGACTGCATT
CTTGCTCGTGTTGGTGCGAGTGACTCGCAGCTCAAGGGTGTGTCGACTTT
CATGGCTGAGATGCTTGAGACCTCCAACATCCTCAAGTCCGCGACCTCGG
AGTCATTGATCATCATCGATGAACTTGGTCGCGGAACAAGTACATACGAT
GGATTCGGCCTTGCATGGGCTATCTCAGAGCACATCGTCACTGAGATTCG
CTGTTTCGGCCTGTTCGCAACCCACTTCCACGAATTGACGGCCCTGGCCG
ATCGGTACCCGAAGTCAGCCAAGAACCTACATGTAGTGGCTTTTATTGGT
GATGGCACGGGCAATGAGGAGGACAGCAAAGACTCGAAGCGAGACCAGGT
TACGTTGCTGTACCGTGTCGAACCGGGCATCTGCGACCAGTCCTTCGGTA
TTCACGTTGCTGAATTGGTCCGCTTTCCGGAGAAGGTAGTCAACATGGCG
CGACAAAAGGCAGATGAGCTTGAGGACTTCACCTCCTCTGGGGCACAGGA
AAAAGAGTCCATGTCACTTGACAAGTACTCCCAGGAAGAAGTTGAAGAGG
GCAGTGCTCTCCTCAAGGATATGTTGCTGAAATGGAAGGAAGCTATTGAG
GCACCTGGCAAGGACCTGACGGTTGAAGAAAAGCGCCAGATCATGCGCGA
TCTTGTCAACAGTGATCCGAAGTTACAGGCGAACAAAGTGTTCCAGGGCA
TCAAAGCTTTGTAGATGTCATCTCGACCAGATCTCAAGGTGGACGACGAA
GTCGGCTTCATCCGCTTCTATCGTTCCATTTCCTCCTCCTCTGACAATGA
CAACAACAACAATGAGACCATTCGAGTTTTCGACCGCGGAGACTGGTACT
CCGCCCACGGTGCCGAAGCTGAATTCATCGCCCGCACCGTCTACAAAACC
ACCTCTGTGATCCGCAATCTGGGCCGCAGCGACACAGGCGGCCTGCCCTC
CGTGACGATGAGCGTGACTGTATTCCGCAATTTCTTACGCGAGGCGCTAT
TCCGACTCAATCGGCGAGTGGAGATCTGGGGCTCTGCGAGCGGGCGCGGC
GGACAGTGGAAGCTCATTAAGCAGGCGAGTCCGGGGAACTTGCAGGATGT
GGAAGAAGAACTGGGGAGTGTAGGTGGGCTGAATATTGAGGCTGGAGCGC
CGATCATTCTGGCTGTGAAGATTTCTGCAAAGGCCGGGGAGGCGAGAAGT
GTGGGGGTTTGTTTTGCGGATGCGAGTGTAAGGGAGTTGGGTGTGAGTGA
ATTCTTGGATAATGATGTTTATTCGAATCTGGAGTCGCTGGTCATTCAGC
TGGGGGTGAAGGAGTGTCTTGTGCAGATGGATGCGGGGAGGAAGGATGTG
GAATTGGGGAAGGTGAGGAATATCATGGATAGTTGTGGGATTGCCGTGTC
GGAGAGGCACAGCGGTGATTTCGGGGTTAGGGATATCGAGCAGGACTTGA
CGAGGTTGTTGAGGGATGAGAGGTCTGCCGGGACGCTGCCTCAGACTGAG
TTGAAGTTGGCGATGGGATCCGCGGCGGCGTTGATCAAGTATCTGGGTGT
TATGACGGATCCGTCCAACTTCGGCCAGTATCGTCTCTATCAGCATGATC
TGTCGCAATTCATGAAGCTGGATTCGTCGGCGCTGAGGGCGTTGAATCTC
ATGCCGGGTCCGCGGGACGGATCTAAGTCGATGAGTTTGTTTGGGTTGCT
GAATCATTGTAAGACGCCGGTGGGCAGCAGGCTGCTGGCGCAGTGGTTGA
AGCAGCCGCTAATGGATAAAGCTGAGATTGAGAAGAGACAGCAGCTGGTG
GAGTCGTTTGTGATGGACACGGAACTTCGGCAGACTATGCAGGAGGAGCA
TTTGCGCTCGATCCCGGATTTGTATCGCTTGGCGAAGCGGTTTCAGAGGA
AGCAGGCGACACTGGAGGATGTCGTGCGTGTTTATCAGGTTGCCATTCGC
CTGCCAGGCTTTGTTGCGTCACTGGAGAATGTGATGGATGAACAGTATCA
GACGCCTCTGGAAGCGGAGTATACGTCCAAGCTGCGCAGCCATTCCGATA
ACCTGGCAAAGCTGGAGGAGATGGTTGAGACGACGGTGGACTTGGATGCA
TTGGAGAACCACGAGTTCATTATTAAGCCGGAGTTTGATGAGAGCTTGCG
CATCATTCGCAAGAAGCTGGATAAGCTGCGTCACGACATGGACTCGGAAC
ACCGTCGTGTGGGCCGGGATCTGGACCAAGAAGTTGACAAGAAGCTGTTC
CTGGAGAATCATCGTGTGCATGGCTGGTGCTTCCGATTGACTCGCAACGA
GGCGGGCTGTATTCGCAACAAAAGAGAGTACCAGGAGTGCTCAACTCAGA
AGAACGGTGTCTACTTTACGACCTCGACAATGCAGGCGCTCCGTCGCGAG
CACGACCAGCTGTCATCTAACTACAATCGCACTCAGACTGGTTTGGTTAG
CGAGGTTGTTGGTGTGGCTGCCTCCTACTGCCCTGTCCTTGAGCAGCTTG
CTGGCGTTTTGGCTCACCTCGATGTCATTGTGAGCTTCGCGCATTGTGCC
GTGCACGCCCCTACACCATATGTCCGTCCCAAGATTCACCCGCGTGGTAC
TGGAAACACGGTTCTGAAGGAGGCCCGGCATCCTTGTATGGAAATGCAGG
ATGACATCTCTTTTATCACCAACGACGTGTCGCTCATCCGTGATGAGTCT
TCCTTCCTGATCATTACCGGTCCCAATATGGGTGGTAAATCGACCTACAT
CCGACAGATTGGCGTCATTGCGCTGATGGCCCAGACTGGATGCTTCGTGC
CATGCTCCGAGGCGGAGCTGACTATTTTCGACTGCATTCTTGCTCGTGTT
GGTGCGAGTGACTCGCAGCTCAAGGGTGTGTCGACTTTCATGGCTGAGAT
GCTTGAGACCTCCAACATCCTCAAGTCCGCGACCTCGGAGTCATTGATCA
TCATCGATGAACTTGGTCGCGGAACAAGTACATACGATGGATTCGGCCTT
GCATGGGCTATCTCAGAGCACATCGTCACTGAGATTCGCTGTTTCGGCCT
GTTCGCAACCCACTTCCACGAATTGACGGCCCTGGCCGATCGGTACCCGA
AGTCAGCCAAGAACCTACATGTAGTGGCTTTTATTGGTGATGGCACGGGC
AATGAGGAGGACAGCAAAGACTCGAAGCGAGACCAGGTTACGTTGCTGTA
CCGTGTCGAACCGGGCATCTGCGACCAGTCCTTCGGTATTCACGTTGCTG
AATTGGTCCGCTTTCCGGAGAAGGTAGTCAACATGGCGCGACAAAAGGCA
GATGAGCTTGAGGACTTCACCTCCTCTGGGGCACAGGAAAAAGAGTCCAT
GTCACTTGACAAGTACTCCCAGGAAGAAGTTGAAGAGGGCAGTGCTCTCC
TCAAGGATATGTTGCTGAAATGGAAGGAAGCTATTGAGGCACCTGGCAAG
GACCTGACGGTTGAAGAAAAGCGCCAGATCATGCGCGATCTTGTCAACAG
TGATCCGAAGTTACAGGCGAACAAAGTGTTCCAGGGCATCAAAGCTTTGT
AGATGTCATCTCGACCAGATCTCAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006298mismatch repair
Vocabulary: Molecular Function
TermDefinition
GO:0030983mismatched DNA binding
GO:0005524ATP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
MSH2CAN33_14305Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_14305-T1CAN33_14305-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_14305-T1.cdsCAN33_14305-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_14305-T1.exon2CAN33_14305-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_14305-T1.exon1CAN33_14305-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteBUSCO:EOG09260EPQ
DBxrefInterPro:IPR036187
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR011184
DBxrefInterPro:IPR016151
DBxrefInterPro:IPR036678
DBxrefInterPro:IPR007861
DBxrefInterPro:IPR007695
DBxrefInterPro:IPR007860
DBxrefInterPro:IPR000432
DBxrefInterPro:IPR007696
DBxrefPFAM:PF00488
DBxrefPFAM:PF05190
DBxrefPFAM:PF05192
DBxrefPFAM:PF05188
DBxrefPFAM:PF01624
ProductMutS-like protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000010.1supercontigNKJJ01000010.1:1381823..1384731 -
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