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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000010.1:1389681..1391707- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_14320-T1 ID=CAN33_14320-T1|Name=CAN33_14320-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2027bp|location=Sequence derived from alignment at NKJJ01000010.1:1389681..1391707- (Aspergillus niger FDAARGOS_311)
ATGTCTTCATTCTTACCTGTGAATAATATTTCATCGCCGCCGGACCGCGT
CATGGAGGAGGCGACAACATCTTCCACACCACGCCCTCATGCCAAGCCCA
GCGCGGCGCCCCAAGATACGACTTCGTCCATGATCGCCGCCCATGACGAG
AGCACGCCTCGGAATATAAATAGCATCGAAGACTCACATCACCATGCCGA
TTCCCAGGGGAGTGCATCGCTGACCTCAGACGATGCCGTACACGGTGAGT
CGGACGAAGGATCTGAACATGAGGCGGAAAACAAGGGTGGCGCTCCACCT
TCGAAGAAGAAGAAGGGTCAGCGATTCTATTGCACAGACTTCCCACCCTG
TAACCTGAGTTTTACACGGAGTGAACATCTCGCTCGACATATCCGCAAAC
ATACCGGGGAACGTCCCTTTCAGTGTCACTGTTCACGTCGCTTTTCCCGC
CTCGACAATTTGCGACAGCATGCTCAGACGGTGCACGTCAACGAAGAAAT
CCCTGGAGACTCTCTTGCAGCCACTGGAACACGGTTCCAGCGTCAGATTC
GGACAGACCGTGTACGACCCCAGGGTCGAGCTAGAGCAGGAACCGCGGGC
AGTCAGGGAACCCATAGTCGAGGTCACAGTCGAAACCTTTCTGCCTCGAG
TATTACCTCAACTGCGTCCACCTTCAGTCAGCCCCAGGAGCTTCGTCGCC
GACCTCCACCCTTGATGATGGCGAATGATAGGGCGCGTCTGATGGAGCCG
ATGGATGCCCCTAGCACGCCACCAGCCCGCGGAATACCTGGCCCAGCAGC
CGGCGGATCTCCCTACACGCCGTCTCACCACATCTTCTCAGCGGGCGGCA
ACGGCAGTCCGCACGTGGCTTCCCCCATCTCTACTGCATCACAGGCCTCG
GGCTTCTGGGAAGGCAAAACTGCCGCCCGCCGTCTCTCCGTGCCTACGGG
TGCGAACCCATTTGCGTCGCAGCACGTCAATGCCTACCCACCGAACTACG
TTCCAACGCAAGCGTACGGTCCCCATGGAGGCGTCTACGCGAGCCCTGTC
AGCTCGTCATACTCACTCTCCCGCGACGAAACAAGTCACGGCGCTACCGA
TGCTGATCTCAGGAGAAGGACCTGGCATCCTTCAACCTGGTCCACGGTCC
CTCGGCCTGCTACGAGCGGCCTTAGCAACTACCAGACGCCAGAAGTGTTT
AAGCCATCTTTTGGCGCCAATGGATCAGCAGAGCAGCCACCGCGGCTGCC
AGGAATTGAGAGCTTTGATAAGGTAGTGGCTCAAAGACCCTTGACCCCGC
CCGTTCGGCGGTCGAGTCCGATGCAAATCGACAACCCTAACAAGCCTCCT
CCAAATTATAACATTGCCGGGGGTTACAACTACACACAGCCGGCCAAACG
ACCGGCACCGCCAATCTCGGGCCCTGGCCACCGACGGGGTCATGTCTCTT
GGGACATGTCATTGCACACGAACCTTACTGGCCTGCACATCAGAGACAAG
CCTCCACAGCGGGACGCATCGAACTGGAGCCAGCAGACTATTGCGGAGAT
TCACAATGTGGGATCTCGCCCCTCGTCTTCGTACCAGCCACAGTTCCACG
AGTACCGAGGACATGGGCATGCTCCCTCCTACAGCAATGCTACCTCGAGC
TCTCAGGCGACGCGAACTTCGCCCGAGGACTCGAGTAGCAGCGAAGGGGT
ACACACTCCTTCAACTGCGTCCCTTGAATACCACCCCGCCATTGTGCACA
ACAATGGATACGTGGAGCCGCACCACCCCCCGTTTTCATCCGATACTTCT
CATGCAGTACGCACCCGTTACCCGGAGTATCGCTGAGGGCCAAATCACTG
ATTGAACTGCAGGCCTGTCCCCCGCTTCCCCCACAGACCGATAGCTATCA
CGGCAAACATGATCCACGGTCCGAATTCCTGCCCCATACCGCCCGAGAGC
CTGGAATGGGCCGGCTGGAGGCACTGGTTGCCGTTGCCACGAGTGAAAAC
AAAAGTGCAGCGAAGCTGTTCCTGTGA back to topCoding sequence (CDS) from alignment at NKJJ01000010.1:1389681..1391707- >CAN33_14320-T1 ID=CAN33_14320-T1|Name=CAN33_14320-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3942bp|location=Sequence derived from alignment at NKJJ01000010.1:1389681..1391707- (Aspergillus niger FDAARGOS_311)
GCCTGTCCCCCGCTTCCCCCACAGACCGATAGCTATCACGGCAAACATGA
TCCACGGTCCGAATTCCTGCCCCATACCGCCCGAGAGCCTGGAATGGGCC
GGCTGGAGGCACTGGTTGCCGTTGCCACGAGTGAAAACAAAAGTGCAGCG
AAGCTGTTCCTGTGAATGTCTTCATTCTTACCTGTGAATAATATTTCATC
GCCGCCGGACCGCGTCATGGAGGAGGCGACAACATCTTCCACACCACGCC
CTCATGCCAAGCCCAGCGCGGCGCCCCAAGATACGACTTCGTCCATGATC
GCCGCCCATGACGAGAGCACGCCTCGGAATATAAATAGCATCGAAGACTC
ACATCACCATGCCGATTCCCAGGGGAGTGCATCGCTGACCTCAGACGATG
CCGTACACGGTGAGTCGGACGAAGGATCTGAACATGAGGCGGAAAACAAG
GGTGGCGCTCCACCTTCGAAGAAGAAGAAGGGTCAGCGATTCTATTGCAC
AGACTTCCCACCCTGTAACCTGAGTTTTACACGGAGTGAACATCTCGCTC
GACATATCCGCAAACATACCGGGGAACGTCCCTTTCAGTGTCACTGTTCA
CGTCGCTTTTCCCGCCTCGACAATTTGCGACAGCATGCTCAGACGGTGCA
CGTCAACGAAGAAATCCCTGGAGACTCTCTTGCAGCCACTGGAACACGGT
TCCAGCGTCAGATTCGGACAGACCGTGTACGACCCCAGGGTCGAGCTAGA
GCAGGAACCGCGGGCAGTCAGGGAACCCATAGTCGAGGTCACAGTCGAAA
CCTTTCTGCCTCGAGTATTACCTCAACTGCGTCCACCTTCAGTCAGCCCC
AGGAGCTTCGTCGCCGACCTCCACCCTTGATGATGGCGAATGATAGGGCG
CGTCTGATGGAGCCGATGGATGCCCCTAGCACGCCACCAGCCCGCGGAAT
ACCTGGCCCAGCAGCCGGCGGATCTCCCTACACGCCGTCTCACCACATCT
TCTCAGCGGGCGGCAACGGCAGTCCGCACGTGGCTTCCCCCATCTCTACT
GCATCACAGGCCTCGGGCTTCTGGGAAGGCAAAACTGCCGCCCGCCGTCT
CTCCGTGCCTACGGGTGCGAACCCATTTGCGTCGCAGCACGTCAATGCCT
ACCCACCGAACTACGTTCCAACGCAAGCGTACGGTCCCCATGGAGGCGTC
TACGCGAGCCCTGTCAGCTCGTCATACTCACTCTCCCGCGACGAAACAAG
TCACGGCGCTACCGATGCTGATCTCAGGAGAAGGACCTGGCATCCTTCAA
CCTGGTCCACGGTCCCTCGGCCTGCTACGAGCGGCCTTAGCAACTACCAG
ACGCCAGAAGTGTTTAAGCCATCTTTTGGCGCCAATGGATCAGCAGAGCA
GCCACCGCGGCTGCCAGGAATTGAGAGCTTTGATAAGGTAGTGGCTCAAA
GACCCTTGACCCCGCCCGTTCGGCGGTCGAGTCCGATGCAAATCGACAAC
CCTAACAAGCCTCCTCCAAATTATAACATTGCCGGGGGTTACAACTACAC
ACAGCCGGCCAAACGACCGGCACCGCCAATCTCGGGCCCTGGCCACCGAC
GGGGTCATGTCTCTTGGGACATGTCATTGCACACGAACCTTACTGGCCTG
CACATCAGAGACAAGCCTCCACAGCGGGACGCATCGAACTGGAGCCAGCA
GACTATTGCGGAGATTCACAATGTGGGATCTCGCCCCTCGTCTTCGTACC
AGCCACAGTTCCACGAGTACCGAGGACATGGGCATGCTCCCTCCTACAGC
AATGCTACCTCGAGCTCTCAGGCGACGCGAACTTCGCCCGAGGACTCGAG
TAGCAGCGAAGGGGTACACACTCCTTCAACTGCGTCCCTTGAATACCACC
CCGCCATTGTGCACAACAATGGATACGTGGAGCCGCACCACCCCCCGTTT
TCATCCGATACTTCTCATGCAGCCTGTCCCCCGCTTCCCCCACAGACCGA
TAGCTATCACGGCAAACATGATCCACGGTCCGAATTCCTGCCCCATACCG
CCCGAGAGCCTGGAATGGGCCGGCTGGAGGCACTGGTTGCCGTTGCCACG
AGTGAAAACAAAAGTGCAGCGAAGCTGTTCCTGTGAATGTCTTCATTCTT
ACCTGTGAATAATATTTCATCGCCGCCGGACCGCGTCATGGAGGAGGCGA
CAACATCTTCCACACCACGCCCTCATGCCAAGCCCAGCGCGGCGCCCCAA
GATACGACTTCGTCCATGATCGCCGCCCATGACGAGAGCACGCCTCGGAA
TATAAATAGCATCGAAGACTCACATCACCATGCCGATTCCCAGGGGAGTG
CATCGCTGACCTCAGACGATGCCGTACACGGTGAGTCGGACGAAGGATCT
GAACATGAGGCGGAAAACAAGGGTGGCGCTCCACCTTCGAAGAAGAAGAA
GGGTCAGCGATTCTATTGCACAGACTTCCCACCCTGTAACCTGAGTTTTA
CACGGAGTGAACATCTCGCTCGACATATCCGCAAACATACCGGGGAACGT
CCCTTTCAGTGTCACTGTTCACGTCGCTTTTCCCGCCTCGACAATTTGCG
ACAGCATGCTCAGACGGTGCACGTCAACGAAGAAATCCCTGGAGACTCTC
TTGCAGCCACTGGAACACGGTTCCAGCGTCAGATTCGGACAGACCGTGTA
CGACCCCAGGGTCGAGCTAGAGCAGGAACCGCGGGCAGTCAGGGAACCCA
TAGTCGAGGTCACAGTCGAAACCTTTCTGCCTCGAGTATTACCTCAACTG
CGTCCACCTTCAGTCAGCCCCAGGAGCTTCGTCGCCGACCTCCACCCTTG
ATGATGGCGAATGATAGGGCGCGTCTGATGGAGCCGATGGATGCCCCTAG
CACGCCACCAGCCCGCGGAATACCTGGCCCAGCAGCCGGCGGATCTCCCT
ACACGCCGTCTCACCACATCTTCTCAGCGGGCGGCAACGGCAGTCCGCAC
GTGGCTTCCCCCATCTCTACTGCATCACAGGCCTCGGGCTTCTGGGAAGG
CAAAACTGCCGCCCGCCGTCTCTCCGTGCCTACGGGTGCGAACCCATTTG
CGTCGCAGCACGTCAATGCCTACCCACCGAACTACGTTCCAACGCAAGCG
TACGGTCCCCATGGAGGCGTCTACGCGAGCCCTGTCAGCTCGTCATACTC
ACTCTCCCGCGACGAAACAAGTCACGGCGCTACCGATGCTGATCTCAGGA
GAAGGACCTGGCATCCTTCAACCTGGTCCACGGTCCCTCGGCCTGCTACG
AGCGGCCTTAGCAACTACCAGACGCCAGAAGTGTTTAAGCCATCTTTTGG
CGCCAATGGATCAGCAGAGCAGCCACCGCGGCTGCCAGGAATTGAGAGCT
TTGATAAGGTAGTGGCTCAAAGACCCTTGACCCCGCCCGTTCGGCGGTCG
AGTCCGATGCAAATCGACAACCCTAACAAGCCTCCTCCAAATTATAACAT
TGCCGGGGGTTACAACTACACACAGCCGGCCAAACGACCGGCACCGCCAA
TCTCGGGCCCTGGCCACCGACGGGGTCATGTCTCTTGGGACATGTCATTG
CACACGAACCTTACTGGCCTGCACATCAGAGACAAGCCTCCACAGCGGGA
CGCATCGAACTGGAGCCAGCAGACTATTGCGGAGATTCACAATGTGGGAT
CTCGCCCCTCGTCTTCGTACCAGCCACAGTTCCACGAGTACCGAGGACAT
GGGCATGCTCCCTCCTACAGCAATGCTACCTCGAGCTCTCAGGCGACGCG
AACTTCGCCCGAGGACTCGAGTAGCAGCGAAGGGGTACACACTCCTTCAA
CTGCGTCCCTTGAATACCACCCCGCCATTGTGCACAACAATGGATACGTG
GAGCCGCACCACCCCCCGTTTTCATCCGATACTTCTCATGCA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036236 |
| DBxref | InterPro:IPR013087 |
| DBxref | PFAM:PF00096 |
| Product | Zinc-finger double domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000010.1 | supercontig | NKJJ01000010.1:1389681..1391707 - |
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