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CAN33_14495-T1, CAN33_14495-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_14495-T1
Unique NameCAN33_14495-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000010.1:1514189..1514812+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_14495-T1 ID=CAN33_14495-T1|Name=CAN33_14495-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=624bp|location=Sequence derived from alignment at NKJJ01000010.1:1514189..1514812+ (Aspergillus niger FDAARGOS_311)
ATGGCGTCCCGATCCCCCACGGCGGTCACTCCCCTACCAAAATCATCCGT
CGCGCCCGAGACTCCGATGGTCAAGGACGCCCCCGCAACCCCCCAGGCCG
TTCCTTTTCCTTCTCCACAGACATTCGACATAGTCCCGCCGTTGCATGGC
CTCCTTTCGCGTCTTCTATCGCCGCCAACGAACGCTGCTGGAGTCTCCAA
TGGCGTGAGAGCGGCCGATGACCCTACCGGCGCTGCTGCTCCTACCGGTC
CGCCTTCAGGCACCCCTGGCCAACCTCAATCGCAGCAACAAGCCGGGTCC
GAGAACACCAACAATGCTGGAGTCCTGGGGACAGTGACTTCAGCTGGTCC
AGGCGGTGCAGAAATATCCGGCTTGGGCTCGAGTACCTCTCCAGCGCTCG
ATATCAAGGACCTTCCGACAGAGGTCAGCTCGATCAAGATTCGGATTCAG
AAGGCACAGGCCGTGGTGGAAAACTTACCAGACGTTGATCGGTCGGTTGC
TGATCAGGAAGAAGAAATCCAGGAGCTGGAGGACCGAATTGCAAAGCTCA
AATCGGTCATCTCCGACTTTGGCCAGATGGCAAGCTCAGGAGGTGCTAGG
AAGCACAAGTCCCAGGGACCTTGA
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Coding sequence (CDS) from alignment at NKJJ01000010.1:1514189..1514812+

>CAN33_14495-T1 ID=CAN33_14495-T1|Name=CAN33_14495-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=624bp|location=Sequence derived from alignment at NKJJ01000010.1:1514189..1514812+ (Aspergillus niger FDAARGOS_311)
ATGGCGTCCCGATCCCCCACGGCGGTCACTCCCCTACCAAAATCATCCGT
CGCGCCCGAGACTCCGATGGTCAAGGACGCCCCCGCAACCCCCCAGGCCG
TTCCTTTTCCTTCTCCACAGACATTCGACATAGTCCCGCCGTTGCATGGC
CTCCTTTCGCGTCTTCTATCGCCGCCAACGAACGCTGCTGGAGTCTCCAA
TGGCGTGAGAGCGGCCGATGACCCTACCGGCGCTGCTGCTCCTACCGGTC
CGCCTTCAGGCACCCCTGGCCAACCTCAATCGCAGCAACAAGCCGGGTCC
GAGAACACCAACAATGCTGGAGTCCTGGGGACAGTGACTTCAGCTGGTCC
AGGCGGTGCAGAAATATCCGGCTTGGGCTCGAGTACCTCTCCAGCGCTCG
ATATCAAGGACCTTCCGACAGAGGTCAGCTCGATCAAGATTCGGATTCAG
AAGGCACAGGCCGTGGTGGAAAACTTACCAGACGTTGATCGGTCGGTTGC
TGATCAGGAAGAAGAAATCCAGGAGCTGGAGGACCGAATTGCAAAGCTCA
AATCGGTCATCTCCGACTTTGGCCAGATGGCAAGCTCAGGAGGTGCTAGG
AAGCACAAGTCCCAGGGACCTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016592mediator complex
Vocabulary: Molecular Function
TermDefinition
GO:0003712transcription coregulator activity
Vocabulary: Biological Process
TermDefinition
GO:0006357regulation of transcription by RNA polymerase II
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_14495CAN33_14495Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_14495-T1.exon1CAN33_14495-T1.exon1Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_14495-T1.cdsCAN33_14495-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_14495-T1CAN33_14495-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR011425
DBxrefPFAM:PF07544
ProductRNA polymerase II transcription mediator complex subunit 9 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000010.1supercontigNKJJ01000010.1:1514189..1514812 +
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