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CAN33_14515-T1, CAN33_14515-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_14515-T1
Unique NameCAN33_14515-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000010.1:1522990..1524001-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_14515-T1 ID=CAN33_14515-T1|Name=CAN33_14515-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1012bp|location=Sequence derived from alignment at NKJJ01000010.1:1522990..1524001- (Aspergillus niger FDAARGOS_311)
ATGGGTGTCACCTTCGACAAGTGCGAGACCCGCCCGGCCAACATTGACGC
CATCCTCAATGGCCTCGACCGCTACAACCCCGAGACCACCACTGTCTTCC
AGGACTATGTCGCCCAGCAGTGCGAGGACCGCACCTTCGACTGCTACGCC
AACCTGGCCTTGCTGAAGTTGTGAGTTCATGCGCCTTTCTATCCAGTTCA
AAACACTTTCAGCCGAAACATAAAGAGCTCCGACGCGGGGAACCATTTTG
GTTTTATGTGATGAAGAATCTTATATCATTATCACGTTTCCTATTACCTG
ACACCCTACTTTGGGGGATGTCGAGACTCCAATTCTCCTGAAACAAAACC
ATGATCTCAACTTTTATTCTATCGCATGTACATCATACCTGAATAGCGAT
GCTAACCCCTTCACGCCCTCTGACAGGTACCAGTTCAACCCCCACCTTCT
CCAGGCGGAGACCGTCACCAACGTCCTCGTCAAGGCCCTGACTGTCTTCC
CCTCTCCCGCTTTCTCCCTCTGCCTTGCTCTTCTCCCCGCCCACACTCAG
CCCTTCCAGGCCTCCGACGCTGAGGCCCAGGCCGCCGCCCAGACCTCCGA
CTTCGTCGAGTCGATCCAGAAGCTCGCCCGCCTCTCCACCCTCCTCGAGT
CTGCCCAGTACACCCAGTTCTGGTCCACCCTGAACTCGGACGACCTGTAC
GCTGACCTTGTTGCCGACGTTGCCGGATTCGAGGAGCTCGTGCGCATCCG
CATTGCCGTCGAGGTCGGCAAGACCTTCCGTGAGATCCCTGCCGAGGTTC
TGGAGCAGTGGCTCGACCTGCGCAGCCGCGAGGCTCTCGAGAAGTTCGTC
GCCGAGGTCTGCAGCTGGGAGGTTGACAAGTCTGGCGCCAACACCGTGAT
CAAGGTGCCCACCAACAAGGAGAACGAGGCCCGCAGCGAGGTCAAGAGCG
AGCGCGTCGGCGTCGACATGTTCGGCCGTGTCATCCGCCGTGGTTTCGAG
CAGGCTGCATGA
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Coding sequence (CDS) from alignment at NKJJ01000010.1:1522990..1524001-

>CAN33_14515-T1 ID=CAN33_14515-T1|Name=CAN33_14515-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1512bp|location=Sequence derived from alignment at NKJJ01000010.1:1522990..1524001- (Aspergillus niger FDAARGOS_311)
GTACCAGTTCAACCCCCACCTTCTCCAGGCGGAGACCGTCACCAACGTCC
TCGTCAAGGCCCTGACTGTCTTCCCCTCTCCCGCTTTCTCCCTCTGCCTT
GCTCTTCTCCCCGCCCACACTCAGCCCTTCCAGGCCTCCGACGCTGAGGC
CCAGGCCGCCGCCCAGACCTCCGACTTCGTCGAGTCGATCCAGAAGCTCG
CCCGCCTCTCCACCCTCCTCGAGTCTGCCCAGTACACCCAGTTCTGGTCC
ACCCTGAACTCGGACGACCTGTACGCTGACCTTGTTGCCGACGTTGCCGG
ATTCGAGGAGCTCGTGCGCATCCGCATTGCCGTCGAGGTCGGCAAGACCT
TCCGTGAGATCCCTGCCGAGGTTCTGGAGCAGTGGCTCGACCTGCGCAGC
CGCGAGGCTCTCGAGAAGTTCGTCGCCGAGGTCTGCAGCTGGGAGGTTGA
CAAGTCTGGCGCCAACACCGTGATCAAGGTGCCCACCAACAAGGAGAACG
AGGCCCGCAGCGAGGTCAAGAGCGAGCGCGTCGGCGTCGACATGTTCGGC
CGTGTCATCCGCCGTGGTTTCGAGCAGGCTGCATGAATGGGTGTCACCTT
CGACAAGTGCGAGACCCGCCCGGCCAACATTGACGCCATCCTCAATGGCC
TCGACCGCTACAACCCCGAGACCACCACTGTCTTCCAGGACTATGTCGCC
CAGCAGTGCGAGGACCGCACCTTCGACTGCTACGCCAACCTGGCCTTGCT
GAAGTTGTACCAGTTCAACCCCCACCTTCTCCAGGCGGAGACCGTCACCA
ACGTCCTCGTCAAGGCCCTGACTGTCTTCCCCTCTCCCGCTTTCTCCCTC
TGCCTTGCTCTTCTCCCCGCCCACACTCAGCCCTTCCAGGCCTCCGACGC
TGAGGCCCAGGCCGCCGCCCAGACCTCCGACTTCGTCGAGTCGATCCAGA
AGCTCGCCCGCCTCTCCACCCTCCTCGAGTCTGCCCAGTACACCCAGTTC
TGGTCCACCCTGAACTCGGACGACCTGTACGCTGACCTTGTTGCCGACGT
TGCCGGATTCGAGGAGCTCGTGCGCATCCGCATTGCCGTCGAGGTCGGCA
AGACCTTCCGTGAGATCCCTGCCGAGGTTCTGGAGCAGTGGCTCGACCTG
CGCAGCCGCGAGGCTCTCGAGAAGTTCGTCGCCGAGGTCTGCAGCTGGGA
GGTTGACAAGTCTGGCGCCAACACCGTGATCAAGGTGCCCACCAACAAGG
AGAACGAGGCCCGCAGCGAGGTCAAGAGCGAGCGCGTCGGCGTCGACATG
TTCGGCCGTGTCATCCGCCGTGGTTTCGAGCAGGCTGCATGAATGGGTGT
CACCTTCGACAAGTGCGAGACCCGCCCGGCCAACATTGACGCCATCCTCA
ATGGCCTCGACCGCTACAACCCCGAGACCACCACTGTCTTCCAGGACTAT
GTCGCCCAGCAGTGCGAGGACCGCACCTTCGACTGCTACGCCAACCTGGC
CTTGCTGAAGTT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0005852eukaryotic translation initiation factor 3 complex
Vocabulary: Biological Process
TermDefinition
GO:0006446regulation of translational initiation
Vocabulary: Molecular Function
TermDefinition
GO:0043022ribosome binding
GO:0003743translation initiation factor activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_14515CAN33_14515Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_14515-T1CAN33_14515-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_14515-T1.cdsCAN33_14515-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_14515-T1.exon2CAN33_14515-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_14515-T1.exon1CAN33_14515-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR016024
DBxrefInterPro:IPR036390
DBxrefInterPro:IPR000717
DBxrefInterPro:IPR009374
DBxrefInterPro:IPR016020
DBxrefInterPro:IPR036388
DBxrefInterPro:IPR033464
DBxrefPFAM:PF10075
ProductCOP9 signalosome subunit CSN8 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000010.1supercontigNKJJ01000010.1:1522990..1524001 -
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