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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000010.1:1590037..1592427- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_14630-T1 ID=CAN33_14630-T1|Name=CAN33_14630-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2391bp|location=Sequence derived from alignment at NKJJ01000010.1:1590037..1592427- (Aspergillus niger FDAARGOS_311)
ATGGGCATTAAAGGTATCCTTCTGATTGTCCTTGCCCCACAAAGTGTTAG
GCTTGCTTACACACCATATAGGGCTTCATGGCCTGCTCAAATCCATACAA
AAACCGTGTCACCTCAAAAAGTTCAGTGGGCAGACCCTGGGAATCGATGC
ATATGGATGGCTACATCGAGGCACCGTCGCCTGCGCGGTGGACTTGGTTT
TGGAAAGGCCTACTAGGAAGTACGTCCAAAACTCATAAGCTTGTATGTCA
CCATCTCTTGCTCACACGATTGCAGACATATCGATTTCGTCTTAAACCGA
GTCCGCATGCTCCTCTACTTCGGGGTGACACCATATCTTGTTTTCGACGG
CGATGAGCTGCCGAGCAAGGCTGGTACCGAGGTGGAGCGTCAAAAGAGAC
GGCAGGACAGCAAAGCCCTCGGCTTGGAACTCCAGCGAAAGGGGCGGATT
GCAGAGGCATACCAGGAACTGCAGAAGGCCGTCGACGTGACGCCCTTGAT
GGCCCGGGAGTTAATAGAGGAGCTGAAGAAGATAAACGTCCAATACGTCG
TGGCTCCGTACGAGGCAGACGCACAACTGGCTTATCTGGAACGACAAGGC
GTTATCTCTGGTATCATTTCAGAGGATTCTGATCTGCTCGTCTTTGGCGC
AAAACGGTTGTTGTCCAAGCTCGACCAACATGGCGACTGTATTGAGATCA
ATCGTGCTGACTTCTCGGCCTGTCGAGAGGTAAGTCTGATCGGATGGACC
GATGATGACTTTCGACGGATGTGCATTCTCAGTGGCTGCGATTATCTTCC
CAATATTGCACGGCTAGGGTTGAAGACAGCCTACCGAAGCATTCGAAAGT
ACAAGAACGTAGAACGGGCGTTGCGGATGCTTCAGTTCGACGGTCAATAC
CACGTTCCCTCTGATTACCTGGACAACTTCAGACAGGCAGAGCTTACGTT
TCTTTATCAGAGAGTTTTCTGTCCGAAAGCTGGGAAACTGGTTACCCTTA
CACCTCCTGAGGCCGAAATAATTCTAGAAGATCTCACATTTATCGGTGGT
GACGTGGAACCTGACATTGCGGTCGGAGTTGCGCGTGGTGATTTGGACCC
AACGACCAAGGAACCTCTTGTACTAAAGCCATCGCTCGCAGCTAAACCGG
CCGATAAGAGGCTGACCAACACGATAAGTCGTCGACAGACCCTGGGCTCG
TCTGCTGAACTCAAGCCAAACAAGCCCATTAATTCCTTCTTCACCCCCAA
GCGCGTTCCTCTGGCAGAGTTGGACCCGAATAGCCTCAGTCCCTCTCCCA
GCCAACAACGGCTGCTACAACGTCATGCCAACAGCTCTTGGGACAGTGTT
CCGGCGCCATCACGGCCAGCACTCATAAGATCTGCGTCATCAGTCGGATC
GTCAAATCGGGCTTCTAGCCCTTTGATTAGAAGTGTGGAGCGTAATGCCT
TCCTGGCACACGCCTCCAGAACATCGAATTTGCAGCCCGCTAAGCGGCAG
CGACTATGTTCTGATGCAGAGGAAGCCAACCTCCCCAATCCGCCGGATTG
CCGCAGCAGATTCTTCTCCGGTAGTGTTGACGATTCTAGTCCAAGTGCAC
AGAAGGCCACCCGCACAAAGAAGGCTCGAAAGTCTACCTTGGACGTTTTC
TCGGATGACTCTGCAGAAGACCTCATGACACAGCTACCAGACCCGAGCCA
CGCGACTGAAACCCCTAGAGTTGAGATACAGATAATTGGTGATAATAATT
CATCCATCAGTGGCAGGTCCATTCAGACGCCTGCCGCAGCTACTTCTGGG
TCCGGTGCTTCTGAATCGCCTGCGGCAAACTGCAAAGACCCAACCGAGAA
GCAGAGTTTTTCCACTGCTGAACAAGCTTCGGAGAAGAGATCGAATGCTG
TCGACGACAGTCCTACACCAGACCTTGTGCCTAATGCAAACTCTGCGACG
CTTTCAAAGTACGTCTTCCAGGCCGGAAATGTTTCTGTGAGTCCTCGAAA
TGATAAGCATGGTGGTAAGGGCCACCAGTCGGGTTCCTTGGATGAGCACA
TGGTGCCTACAGGGGTGCGGCACGGCTTGTTGGGCCACTCTCCCAGACGT
CAGCGGACGACACCATTGCAACGGCTGGGCCAAAGCGCCTTGGCTCGGTC
TCGATCACTCAATTGTGTTTCTCCCTCCCTGGCAGCATTTAGAGCTTCAG
AAACACCGACAAAGAGCCCTGCAGTTGCAAAGCTTGACTCCAACCCAGTG
CGAAGTCTGGCAACACCCAGTCAAGGCAGTGAAGACATGATTATTCCGGA
TAGTGAAGATGAAGAATCCGAGGGCGAGACCCAAGCCCCAGTGGGACTTG
CCTCATTTGATGTGCGACGATTCTCGTTTATGGGTAAATAG back to topCoding sequence (CDS) from alignment at NKJJ01000010.1:1590037..1592427- >CAN33_14630-T1 ID=CAN33_14630-T1|Name=CAN33_14630-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=6831bp|location=Sequence derived from alignment at NKJJ01000010.1:1590037..1592427- (Aspergillus niger FDAARGOS_311)
ACATATCGATTTCGTCTTAAACCGAGTCCGCATGCTCCTCTACTTCGGGG
TGACACCATATCTTGTTTTCGACGGCGATGAGCTGCCGAGCAAGGCTGGT
ACCGAGGTGGAGCGTCAAAAGAGACGGCAGGACAGCAAAGCCCTCGGCTT
GGAACTCCAGCGAAAGGGGCGGATTGCAGAGGCATACCAGGAACTGCAGA
AGGCCGTCGACGTGACGCCCTTGATGGCCCGGGAGTTAATAGAGGAGCTG
AAGAAGATAAACGTCCAATACGTCGTGGCTCCGTACGAGGCAGACGCACA
ACTGGCTTATCTGGAACGACAAGGCGTTATCTCTGGTATCATTTCAGAGG
ATTCTGATCTGCTCGTCTTTGGCGCAAAACGGTTGTTGTCCAAGCTCGAC
CAACATGGCGACTGTATTGAGATCAATCGTGCTGACTTCTCGGCCTGTCG
AGAGGTAAGTCTGATCGGATGGACCGATGATGACTTTCGACGGATGTGCA
TTCTCAGTGGCTGCGATTATCTTCCCAATATTGCACGGCTAGGGTTGAAG
ACAGCCTACCGAAGCATTCGAAAGTACAAGAACGTAGAACGGGCGTTGCG
GATGCTTCAGTTCGACGGTCAATACCACGTTCCCTCTGATTACCTGGACA
ACTTCAGACAGGCAGAGCTTACGTTTCTTTATCAGAGAGTTTTCTGTCCG
AAAGCTGGGAAACTGGTTACCCTTACACCTCCTGAGGCCGAAATAATTCT
AGAAGATCTCACATTTATCGGTGGTGACGTGGAACCTGACATTGCGGTCG
GAGTTGCGCGTGGTGATTTGGACCCAACGACCAAGGAACCTCTTGTACTA
AAGCCATCGCTCGCAGCTAAACCGGCCGATAAGAGGCTGACCAACACGAT
AAGTCGTCGACAGACCCTGGGCTCGTCTGCTGAACTCAAGCCAAACAAGC
CCATTAATTCCTTCTTCACCCCCAAGCGCGTTCCTCTGGCAGAGTTGGAC
CCGAATAGCCTCAGTCCCTCTCCCAGCCAACAACGGCTGCTACAACGTCA
TGCCAACAGCTCTTGGGACAGTGTTCCGGCGCCATCACGGCCAGCACTCA
TAAGATCTGCGTCATCAGTCGGATCGTCAAATCGGGCTTCTAGCCCTTTG
ATTAGAAGTGTGGAGCGTAATGCCTTCCTGGCACACGCCTCCAGAACATC
GAATTTGCAGCCCGCTAAGCGGCAGCGACTATGTTCTGATGCAGAGGAAG
CCAACCTCCCCAATCCGCCGGATTGCCGCAGCAGATTCTTCTCCGGTAGT
GTTGACGATTCTAGTCCAAGTGCACAGAAGGCCACCCGCACAAAGAAGGC
TCGAAAGTCTACCTTGGACGTTTTCTCGGATGACTCTGCAGAAGACCTCA
TGACACAGCTACCAGACCCGAGCCACGCGACTGAAACCCCTAGAGTTGAG
ATACAGATAATTGGTGATAATAATTCATCCATCAGTGGCAGGTCCATTCA
GACGCCTGCCGCAGCTACTTCTGGGTCCGGTGCTTCTGAATCGCCTGCGG
CAAACTGCAAAGACCCAACCGAGAAGCAGAGTTTTTCCACTGCTGAACAA
GCTTCGGAGAAGAGATCGAATGCTGTCGACGACAGTCCTACACCAGACCT
TGTGCCTAATGCAAACTCTGCGACGCTTTCAAAGTACGTCTTCCAGGCCG
GAAATGTTTCTGTGAGTCCTCGAAATGATAAGCATGGTGGTAAGGGCCAC
CAGTCGGGTTCCTTGGATGAGCACATGGTGCCTACAGGGGTGCGGCACGG
CTTGTTGGGCCACTCTCCCAGACGTCAGCGGACGACACCATTGCAACGGC
TGGGCCAAAGCGCCTTGGCTCGGTCTCGATCACTCAATTGTGTTTCTCCC
TCCCTGGCAGCATTTAGAGCTTCAGAAACACCGACAAAGAGCCCTGCAGT
TGCAAAGCTTGACTCCAACCCAGTGCGAAGTCTGGCAACACCCAGTCAAG
GCAGTGAAGACATGATTATTCCGGATAGTGAAGATGAAGAATCCGAGGGC
GAGACCCAAGCCCCAGTGGGACTTGCCTCATTTGATGTGCGACGATTCTC
GTTTATGGGTAAATAGGGCTTCATGGCCTGCTCAAATCCATACAAAAACC
GTGTCACCTCAAAAAGTTCAGTGGGCAGACCCTGGGAATCGATGCATATG
GATGGCTACATCGAGGCACCGTCGCCTGCGCGGTGGACTTGGTTTTGGAA
AGGCCTACTAGGAAATGGGCATTAAAGACATATCGATTTCGTCTTAAACC
GAGTCCGCATGCTCCTCTACTTCGGGGTGACACCATATCTTGTTTTCGAC
GGCGATGAGCTGCCGAGCAAGGCTGGTACCGAGGTGGAGCGTCAAAAGAG
ACGGCAGGACAGCAAAGCCCTCGGCTTGGAACTCCAGCGAAAGGGGCGGA
TTGCAGAGGCATACCAGGAACTGCAGAAGGCCGTCGACGTGACGCCCTTG
ATGGCCCGGGAGTTAATAGAGGAGCTGAAGAAGATAAACGTCCAATACGT
CGTGGCTCCGTACGAGGCAGACGCACAACTGGCTTATCTGGAACGACAAG
GCGTTATCTCTGGTATCATTTCAGAGGATTCTGATCTGCTCGTCTTTGGC
GCAAAACGGTTGTTGTCCAAGCTCGACCAACATGGCGACTGTATTGAGAT
CAATCGTGCTGACTTCTCGGCCTGTCGAGAGGTAAGTCTGATCGGATGGA
CCGATGATGACTTTCGACGGATGTGCATTCTCAGTGGCTGCGATTATCTT
CCCAATATTGCACGGCTAGGGTTGAAGACAGCCTACCGAAGCATTCGAAA
GTACAAGAACGTAGAACGGGCGTTGCGGATGCTTCAGTTCGACGGTCAAT
ACCACGTTCCCTCTGATTACCTGGACAACTTCAGACAGGCAGAGCTTACG
TTTCTTTATCAGAGAGTTTTCTGTCCGAAAGCTGGGAAACTGGTTACCCT
TACACCTCCTGAGGCCGAAATAATTCTAGAAGATCTCACATTTATCGGTG
GTGACGTGGAACCTGACATTGCGGTCGGAGTTGCGCGTGGTGATTTGGAC
CCAACGACCAAGGAACCTCTTGTACTAAAGCCATCGCTCGCAGCTAAACC
GGCCGATAAGAGGCTGACCAACACGATAAGTCGTCGACAGACCCTGGGCT
CGTCTGCTGAACTCAAGCCAAACAAGCCCATTAATTCCTTCTTCACCCCC
AAGCGCGTTCCTCTGGCAGAGTTGGACCCGAATAGCCTCAGTCCCTCTCC
CAGCCAACAACGGCTGCTACAACGTCATGCCAACAGCTCTTGGGACAGTG
TTCCGGCGCCATCACGGCCAGCACTCATAAGATCTGCGTCATCAGTCGGA
TCGTCAAATCGGGCTTCTAGCCCTTTGATTAGAAGTGTGGAGCGTAATGC
CTTCCTGGCACACGCCTCCAGAACATCGAATTTGCAGCCCGCTAAGCGGC
AGCGACTATGTTCTGATGCAGAGGAAGCCAACCTCCCCAATCCGCCGGAT
TGCCGCAGCAGATTCTTCTCCGGTAGTGTTGACGATTCTAGTCCAAGTGC
ACAGAAGGCCACCCGCACAAAGAAGGCTCGAAAGTCTACCTTGGACGTTT
TCTCGGATGACTCTGCAGAAGACCTCATGACACAGCTACCAGACCCGAGC
CACGCGACTGAAACCCCTAGAGTTGAGATACAGATAATTGGTGATAATAA
TTCATCCATCAGTGGCAGGTCCATTCAGACGCCTGCCGCAGCTACTTCTG
GGTCCGGTGCTTCTGAATCGCCTGCGGCAAACTGCAAAGACCCAACCGAG
AAGCAGAGTTTTTCCACTGCTGAACAAGCTTCGGAGAAGAGATCGAATGC
TGTCGACGACAGTCCTACACCAGACCTTGTGCCTAATGCAAACTCTGCGA
CGCTTTCAAAGTACGTCTTCCAGGCCGGAAATGTTTCTGTGAGTCCTCGA
AATGATAAGCATGGTGGTAAGGGCCACCAGTCGGGTTCCTTGGATGAGCA
CATGGTGCCTACAGGGGTGCGGCACGGCTTGTTGGGCCACTCTCCCAGAC
GTCAGCGGACGACACCATTGCAACGGCTGGGCCAAAGCGCCTTGGCTCGG
TCTCGATCACTCAATTGTGTTTCTCCCTCCCTGGCAGCATTTAGAGCTTC
AGAAACACCGACAAAGAGCCCTGCAGTTGCAAAGCTTGACTCCAACCCAG
TGCGAAGTCTGGCAACACCCAGTCAAGGCAGTGAAGACATGATTATTCCG
GATAGTGAAGATGAAGAATCCGAGGGCGAGACCCAAGCCCCAGTGGGACT
TGCCTCATTTGATGTGCGACGATTCTCGTTTATGGGTAAATAGGGCTTCA
TGGCCTGCTCAAATCCATACAAAAACCGTGTCACCTCAAAAAGTTCAGTG
GGCAGACCCTGGGAATCGATGCATATGGATGGCTACATCGAGGCACCGTC
GCCTGCGCGGTGGACTTGGTTTTGGAAAGGCCTACTAGGAAATGGGCATT
AAAGACATATCGATTTCGTCTTAAACCGAGTCCGCATGCTCCTCTACTTC
GGGGTGACACCATATCTTGTTTTCGACGGCGATGAGCTGCCGAGCAAGGC
TGGTACCGAGGTGGAGCGTCAAAAGAGACGGCAGGACAGCAAAGCCCTCG
GCTTGGAACTCCAGCGAAAGGGGCGGATTGCAGAGGCATACCAGGAACTG
CAGAAGGCCGTCGACGTGACGCCCTTGATGGCCCGGGAGTTAATAGAGGA
GCTGAAGAAGATAAACGTCCAATACGTCGTGGCTCCGTACGAGGCAGACG
CACAACTGGCTTATCTGGAACGACAAGGCGTTATCTCTGGTATCATTTCA
GAGGATTCTGATCTGCTCGTCTTTGGCGCAAAACGGTTGTTGTCCAAGCT
CGACCAACATGGCGACTGTATTGAGATCAATCGTGCTGACTTCTCGGCCT
GTCGAGAGGTAAGTCTGATCGGATGGACCGATGATGACTTTCGACGGATG
TGCATTCTCAGTGGCTGCGATTATCTTCCCAATATTGCACGGCTAGGGTT
GAAGACAGCCTACCGAAGCATTCGAAAGTACAAGAACGTAGAACGGGCGT
TGCGGATGCTTCAGTTCGACGGTCAATACCACGTTCCCTCTGATTACCTG
GACAACTTCAGACAGGCAGAGCTTACGTTTCTTTATCAGAGAGTTTTCTG
TCCGAAAGCTGGGAAACTGGTTACCCTTACACCTCCTGAGGCCGAAATAA
TTCTAGAAGATCTCACATTTATCGGTGGTGACGTGGAACCTGACATTGCG
GTCGGAGTTGCGCGTGGTGATTTGGACCCAACGACCAAGGAACCTCTTGT
ACTAAAGCCATCGCTCGCAGCTAAACCGGCCGATAAGAGGCTGACCAACA
CGATAAGTCGTCGACAGACCCTGGGCTCGTCTGCTGAACTCAAGCCAAAC
AAGCCCATTAATTCCTTCTTCACCCCCAAGCGCGTTCCTCTGGCAGAGTT
GGACCCGAATAGCCTCAGTCCCTCTCCCAGCCAACAACGGCTGCTACAAC
GTCATGCCAACAGCTCTTGGGACAGTGTTCCGGCGCCATCACGGCCAGCA
CTCATAAGATCTGCGTCATCAGTCGGATCGTCAAATCGGGCTTCTAGCCC
TTTGATTAGAAGTGTGGAGCGTAATGCCTTCCTGGCACACGCCTCCAGAA
CATCGAATTTGCAGCCCGCTAAGCGGCAGCGACTATGTTCTGATGCAGAG
GAAGCCAACCTCCCCAATCCGCCGGATTGCCGCAGCAGATTCTTCTCCGG
TAGTGTTGACGATTCTAGTCCAAGTGCACAGAAGGCCACCCGCACAAAGA
AGGCTCGAAAGTCTACCTTGGACGTTTTCTCGGATGACTCTGCAGAAGAC
CTCATGACACAGCTACCAGACCCGAGCCACGCGACTGAAACCCCTAGAGT
TGAGATACAGATAATTGGTGATAATAATTCATCCATCAGTGGCAGGTCCA
TTCAGACGCCTGCCGCAGCTACTTCTGGGTCCGGTGCTTCTGAATCGCCT
GCGGCAAACTGCAAAGACCCAACCGAGAAGCAGAGTTTTTCCACTGCTGA
ACAAGCTTCGGAGAAGAGATCGAATGCTGTCGACGACAGTCCTACACCAG
ACCTTGTGCCTAATGCAAACTCTGCGACGCTTTCAAAGTACGTCTTCCAG
GCCGGAAATGTTTCTGTGAGTCCTCGAAATGATAAGCATGGTGGTAAGGG
CCACCAGTCGGGTTCCTTGGATGAGCACATGGTGCCTACAGGGGTGCGGC
ACGGCTTGTTGGGCCACTCTCCCAGACGTCAGCGGACGACACCATTGCAA
CGGCTGGGCCAAAGCGCCTTGGCTCGGTCTCGATCACTCAATTGTGTTTC
TCCCTCCCTGGCAGCATTTAGAGCTTCAGAAACACCGACAAAGAGCCCTG
CAGTTGCAAAGCTTGACTCCAACCCAGTGCGAAGTCTGGCAACACCCAGT
CAAGGCAGTGAAGACATGATTATTCCGGATAGTGAAGATGAAGAATCCGA
GGGCGAGACCCAAGCCCCAGTGGGACTTGCCTCATTTGATGTGCGACGAT
TCTCGTTTATGGGTAAATAGGGCTTCATGGCCTGCTCAAATCCATACAAA
AACCGTGTCACCTCAAAAAGTTCAGTGGGCAGACCCTGGGAATCGATGCA
TATGGATGGCTACATCGAGGCACCGTCGCCTGCGCGGTGGACTTGGTTTT
GGAAAGGCCTACTAGGAAATGGGCATTAAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
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| GO:0006281 | DNA repair |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0035312 | 5'-3' exodeoxyribonuclease activity |
| GO:0016788 | hydrolase activity, acting on ester bonds |
| GO:0003677 | DNA binding |
| GO:0003824 | catalytic activity |
| GO:0004518 | nuclease activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09262A65 |
| DBxref | InterPro:IPR029060 |
| DBxref | InterPro:IPR036279 |
| DBxref | InterPro:IPR037315 |
| DBxref | InterPro:IPR019974 |
| DBxref | InterPro:IPR008918 |
| DBxref | InterPro:IPR006085 |
| DBxref | InterPro:IPR006086 |
| DBxref | InterPro:IPR006084 |
| DBxref | PFAM:PF00752 |
| DBxref | PFAM:PF00867 |
| Product | XPG I-region family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000010.1 | supercontig | NKJJ01000010.1:1590037..1592427 - |
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