You are here

Home

CAN33_14740-T1, CAN33_14740-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_14740-T1
Unique NameCAN33_14740-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000010.1:1647046..1648336-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_14740-T1 ID=CAN33_14740-T1|Name=CAN33_14740-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1291bp|location=Sequence derived from alignment at NKJJ01000010.1:1647046..1648336- (Aspergillus niger FDAARGOS_311)
ATGAACTGCGAGTCATGTAAACGGCGCCATGAGAAGTGCGATAAATTCTT
GCCGCAATGGTATGCCTTCCCACGGAGCCCAGTGCATGGTGCCGAGTCAG
TTGACCAGTGCAGTCGAAGTTGCATCAAGCGCAGCGTCTCCTGCAATTAC
ACAAACACAGCAGAGATTGAAGAAGGGCCTAAGTCTTCGCGGCCTATCAG
ACCGAAACCGAACTACTTGCCGCTAAACAAACTCATTGATCTTATTACCA
AGCTCTATGAAAGTCTGGAACAACGCGGCATGAGAAACTACGCAATCTGG
GCTCAGAAGCTGCCTCTGTAAGTAACCCTAACCCATATCGAAGCCAGAGC
TGATATCATATACAGGTTCTATTCTATGGCAGGCTCCGATAACCTAGTAA
TGAACTCGCTCCTCACCCTATCCGCATCCTTGTTAGCTACAATCGAGCAG
AAGGTCGAAGTAAAACAGACAGTTTCCTACTTTCGTCAGAGTGCAGTCGA
GCAACTACGAATAGCTTCTAGCAAGCTTTCCAGGGAGAATTATGATAAAG
TCCTTGCGGCTACCATCCTATTATTATGGGCAGACAGTGAACGGTATAGA
ATCCCTTATTGCCAAAACTACGGATGCTGATAAGTTTAGGTCAAGCTGGA
TAGTATTATGGAATGGTTTGAAATCTGTCTTTTATTCTATGCCGCAGGAA
TGGAGGCACGAGTCTGAGCTGGCAAAGTTCCTCGAGACTGAACAATACCT
TCGAACCTTGGGGTCGTCTTCTATCGTGAGCTGCCAGTTCAATAGTAAGT
ATCTATCCAGCCTTACCGACACAATTACAGTCCTGCAGCATATCCAGAGA
CAAGTTGAGCATATTGAAAAGCACTACAATCTGGTGAACAAACTGGTCAC
ATTTCTGGGAAAATTTCTCGACGATATTGGTTCTCTTTCGCCAGATCAGG
TTTTCCAGCGCATGCACAATCTGCGACAGTGGCTCTTTTGGCTTCCTCCA
GGCATGCTGCGAGATGGCATTGGTGACACCCTTGGTCTAGCGGTTCTAGC
ACAATTTTTTGCTGTGGGACTCGACCTGCACTGCTTATTTCCAGGGCTAG
GATGCCATGATCTTGGGCCATTGGCTGCGGGCCCTATTAAAGAAATTGAC
CGTACTGTCCGTGCGCGCAACATGGCGAAGCCTCACGACCCGGACGTACA
ACTGGCCATGTACCTCATGGATATGCCGCAAAGCATCGCCACCAAGTATC
AGGATCGTCTTATCGCCGACGAAAGTGCTGTGGGACTGTAA
back to top

Coding sequence (CDS) from alignment at NKJJ01000010.1:1647046..1648336-

>CAN33_14740-T1 ID=CAN33_14740-T1|Name=CAN33_14740-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3591bp|location=Sequence derived from alignment at NKJJ01000010.1:1647046..1648336- (Aspergillus niger FDAARGOS_311)
GTCAAGCTGGATAGTATTATGGAATGGTTTGAAATCTGTCTTTTATTCTA
TGCCGCAGGAATGGAGGCACGAGTCTGAGCTGGCAAAGTTCCTCGAGACT
GAACAATACCTTCGAACCTTGGGGTCGTCTTCTATCGTGAGCTGCCAGTT
CAATAGTAAGTATCTATCCAGCCTTACCGACACAATTACAGTCCTGCAGC
ATATCCAGAGACAAGTTGAGCATATTGAAAAGCACTACAATCTGGTGAAC
AAACTGGTCACATTTCTGGGAAAATTTCTCGACGATATTGGTTCTCTTTC
GCCAGATCAGGTTTTCCAGCGCATGCACAATCTGCGACAGTGGCTCTTTT
GGCTTCCTCCAGGCATGCTGCGAGATGGCATTGGTGACACCCTTGGTCTA
GCGGTTCTAGCACAATTTTTTGCTGTGGGACTCGACCTGCACTGCTTATT
TCCAGGGCTAGGATGCCATGATCTTGGGCCATTGGCTGCGGGCCCTATTA
AAGAAATTGACCGTACTGTCCGTGCGCGCAACATGGCGAAGCCTCACGAC
CCGGACGTACAACTGGCCATGTACCTCATGGATATGCCGCAAAGCATCGC
CACCAAGTATCAGGATCGTCTTATCGCCGACGAAAGTGCTGTGGGACTGT
AAGTTCTATTCTATGGCAGGCTCCGATAACCTAGTAATGAACTCGCTCCT
CACCCTATCCGCATCCTTGTTAGCTACAATCGAGCAGAAGGTCGAAGTAA
AACAGACAGTTTCCTACTTTCGTCAGAGTGCAGTCGAGCAACTACGAATA
GCTTCTAGCAAGCTTTCCAGGGAGAATTATGATAAAGTCCTTGCGGCTAC
CATCCTATTATTATGGGCAGACAGTGAACGATGAACTGCGAGTCATGTAA
ACGGCGCCATGAGAAGTGCGATAAATTCTTGCCGCAATGGTATGCCTTCC
CACGGAGCCCAGTGCATGGTGCCGAGTCAGTTGACCAGTGCAGTCGAAGT
TGCATCAAGCGCAGCGTCTCCTGCAATTACACAAACACAGCAGAGATTGA
AGAAGGGCCTAAGTCTTCGCGGCCTATCAGACCGAAACCGAACTACTTGC
CGCTAAACAAACTCATTGATCTTATTACCAAGCTCTATGAAAGTCTGGAA
CAACGCGGCATGAGAAACTACGCAATCTGGGCTCAGAAGCTGCCTCTGTC
AAGCTGGATAGTATTATGGAATGGTTTGAAATCTGTCTTTTATTCTATGC
CGCAGGAATGGAGGCACGAGTCTGAGCTGGCAAAGTTCCTCGAGACTGAA
CAATACCTTCGAACCTTGGGGTCGTCTTCTATCGTGAGCTGCCAGTTCAA
TAGTAAGTATCTATCCAGCCTTACCGACACAATTACAGTCCTGCAGCATA
TCCAGAGACAAGTTGAGCATATTGAAAAGCACTACAATCTGGTGAACAAA
CTGGTCACATTTCTGGGAAAATTTCTCGACGATATTGGTTCTCTTTCGCC
AGATCAGGTTTTCCAGCGCATGCACAATCTGCGACAGTGGCTCTTTTGGC
TTCCTCCAGGCATGCTGCGAGATGGCATTGGTGACACCCTTGGTCTAGCG
GTTCTAGCACAATTTTTTGCTGTGGGACTCGACCTGCACTGCTTATTTCC
AGGGCTAGGATGCCATGATCTTGGGCCATTGGCTGCGGGCCCTATTAAAG
AAATTGACCGTACTGTCCGTGCGCGCAACATGGCGAAGCCTCACGACCCG
GACGTACAACTGGCCATGTACCTCATGGATATGCCGCAAAGCATCGCCAC
CAAGTATCAGGATCGTCTTATCGCCGACGAAAGTGCTGTGGGACTGTAAG
TTCTATTCTATGGCAGGCTCCGATAACCTAGTAATGAACTCGCTCCTCAC
CCTATCCGCATCCTTGTTAGCTACAATCGAGCAGAAGGTCGAAGTAAAAC
AGACAGTTTCCTACTTTCGTCAGAGTGCAGTCGAGCAACTACGAATAGCT
TCTAGCAAGCTTTCCAGGGAGAATTATGATAAAGTCCTTGCGGCTACCAT
CCTATTATTATGGGCAGACAGTGAACGATGAACTGCGAGTCATGTAAACG
GCGCCATGAGAAGTGCGATAAATTCTTGCCGCAATGGTATGCCTTCCCAC
GGAGCCCAGTGCATGGTGCCGAGTCAGTTGACCAGTGCAGTCGAAGTTGC
ATCAAGCGCAGCGTCTCCTGCAATTACACAAACACAGCAGAGATTGAAGA
AGGGCCTAAGTCTTCGCGGCCTATCAGACCGAAACCGAACTACTTGCCGC
TAAACAAACTCATTGATCTTATTACCAAGCTCTATGAAAGTCTGGAACAA
CGCGGCATGAGAAACTACGCAATCTGGGCTCAGAAGCTGCCTCTGTCAAG
CTGGATAGTATTATGGAATGGTTTGAAATCTGTCTTTTATTCTATGCCGC
AGGAATGGAGGCACGAGTCTGAGCTGGCAAAGTTCCTCGAGACTGAACAA
TACCTTCGAACCTTGGGGTCGTCTTCTATCGTGAGCTGCCAGTTCAATAG
TAAGTATCTATCCAGCCTTACCGACACAATTACAGTCCTGCAGCATATCC
AGAGACAAGTTGAGCATATTGAAAAGCACTACAATCTGGTGAACAAACTG
GTCACATTTCTGGGAAAATTTCTCGACGATATTGGTTCTCTTTCGCCAGA
TCAGGTTTTCCAGCGCATGCACAATCTGCGACAGTGGCTCTTTTGGCTTC
CTCCAGGCATGCTGCGAGATGGCATTGGTGACACCCTTGGTCTAGCGGTT
CTAGCACAATTTTTTGCTGTGGGACTCGACCTGCACTGCTTATTTCCAGG
GCTAGGATGCCATGATCTTGGGCCATTGGCTGCGGGCCCTATTAAAGAAA
TTGACCGTACTGTCCGTGCGCGCAACATGGCGAAGCCTCACGACCCGGAC
GTACAACTGGCCATGTACCTCATGGATATGCCGCAAAGCATCGCCACCAA
GTATCAGGATCGTCTTATCGCCGACGAAAGTGCTGTGGGACTGTAAGTTC
TATTCTATGGCAGGCTCCGATAACCTAGTAATGAACTCGCTCCTCACCCT
ATCCGCATCCTTGTTAGCTACAATCGAGCAGAAGGTCGAAGTAAAACAGA
CAGTTTCCTACTTTCGTCAGAGTGCAGTCGAGCAACTACGAATAGCTTCT
AGCAAGCTTTCCAGGGAGAATTATGATAAAGTCCTTGCGGCTACCATCCT
ATTATTATGGGCAGACAGTGAACGATGAACTGCGAGTCATGTAAACGGCG
CCATGAGAAGTGCGATAAATTCTTGCCGCAATGGTATGCCTTCCCACGGA
GCCCAGTGCATGGTGCCGAGTCAGTTGACCAGTGCAGTCGAAGTTGCATC
AAGCGCAGCGTCTCCTGCAATTACACAAACACAGCAGAGATTGAAGAAGG
GCCTAAGTCTTCGCGGCCTATCAGACCGAAACCGAACTACTTGCCGCTAA
ACAAACTCATTGATCTTATTACCAAGCTCTATGAAAGTCTGGAACAACGC
GGCATGAGAAACTACGCAATCTGGGCTCAGAAGCTGCCTCT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_14740CAN33_14740Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_14740-T1CAN33_14740-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_14740-T1.cdsCAN33_14740-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_14740-T1.exon3CAN33_14740-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_14740-T1.exon2CAN33_14740-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_14740-T1.exon1CAN33_14740-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR001138
DBxrefInterPro:IPR021858
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000010.1supercontigNKJJ01000010.1:1647046..1648336 -
Powered by Drupal