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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000010.1:1673672..1675492+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_14790-T1 ID=CAN33_14790-T1|Name=CAN33_14790-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1821bp|location=Sequence derived from alignment at NKJJ01000010.1:1673672..1675492+ (Aspergillus niger FDAARGOS_311)
ATGTCTATCTCGGAAACCGCTAAAGCTGCCGAATGCAGTAAGCAGGCGGT
CAAATATATCCGCTCCAACCTGCGGGTCTTCGGCTCTCCTAGAGCACCGC
CAACTCGAGTTGGCCGAGCGAGATTAATCACACCGGTCATGCTGGAAGCA
CTATGCGAACACCTTCTTGAAAAGCCTGGCTTGTACCTAGACGAGATGGC
AATGTTCCTCTGGGATGAGTTTGGCCTGCAAGTAGCAACCAGCAGCATAA
GCAGGGCCCTTTCCTCGGTCGGTTGGTCCAAAAAGACGGTTCAGCAGAAA
GCAAAAGAGCAGAATCCCGATCTACGCGATGAATATATCCATGAAATATC
TGAATTCAAGTCATACCAACTGGTATTTGTTGATGAATCTGGATGTGACA
AGCGGATAGGATTTAGACGCACGGGCTGGGCCCCTAGTGGTATTGCACCA
GTGCAAGTATCCCGGTTTCATCGCGACAAACGTTACCAGATTCTACCTGC
ATACTCCCAGGATGGTGTTGTCTTGTTCCGCATCTTCAATGGCACAACAG
ACGCAGTTGTCTTTGAGGAGTTCATCGAAGATCTCCTTCGGTACTGTAGG
AAGTACCCAGAAGAAAGGTCCGTGCTTGTAATGGATAATGCTGCATTTCA
TCACTCCGAGCGAGTAGAGCAGTTATGCTCCGAGAAGGGGGTAAAATTAA
TATTCCTACCACCGTACTCGCCTGATCTGAACCCAATTGAAGAGTTCTTT
GCCGAGCTGAAGGCCTTTATAAGGCGACATTGGTACCTCTACGAGGAAGA
CCCTAGCCAAGGCTTTGAAAATTATCTCGCACAGTGCGTAGATACAGTGG
GAGCTCGAGAGAATAGTGCCAGAGGCCATTTCAGGCATGCGGGTCTAGTA
ATAGATGAGGTACAATGAAGGAATATATTCAACATGTGTATAAAAATATC
CATAGATCGGCTGCTAAATTACAGTTAATTATGCGTTTCCATAGACAATT
GTTTACCTTTCTCAAAACTGGTATGCGGTTGCAAATGTCTCACTCCATCA
TGCAGGTACATGCCACGAGAAGAGTGAACCGGTGCGCTTCAATCGCAAGC
CGGTAGCTCAGCCGCAAGCGGCGTGGCTTATGTGAGGCTAACAAAACATC
ACGTGCAAGGCAAGCTCCCAAGTGCTTCGACGTTCTTAGCGAGACAACTT
CATCAAAAGCCTTAGTCCAGGCCGTCCGTATAACAGTCCCTTGTCAGTGT
CATAGGCTGTTCGCAAATACTCATTCAATGATTTCTCGCGCGCTTTTGGA
GGGTCAGCTCGTACCGGATGCTCATGAGCCTCATATTCAAACTCAGGAGG
TGCAATCGAGGACGCAATTGTGGCATAATTTGGCACCGCAGCGACAGCTA
TTGCCCCCCACAACCCATAAAAAGGCAAAAAACAAAAAAAAAAAGAAAAA
AAGCAAAAAGGAAAGGAAAAGAAAGCATGAGTCTGGCAAATCTGGCAATC
TGTCAACACCCTTCCTGTTCAAATCTCGCCATCCTGGCATCTCGGTGCTT
ATATGAAGTGCTCGAGGCGTCCAAGTGGAATATGTCAATGATCCTGTCTA
TCATTCTTTCTAGCTTGTCAGCAGCTGCTTTCCCTAGTGTGAAACACGTC
TCTTGGATGAATGCTAACATGCTCTGGACACTTAGGCTTCTTGGTGGCAT
TTATTCCCTCGAGGAGATGGTCTCTCTCCACTTGAGCCATGGGAACAAAC
TCTATCGCATGCCCCAACTCCTTGTTTTCAGCACCGAAAATACCACCATC
TGGTCACTGTCCTCCCCCTAG back to topCoding sequence (CDS) from alignment at NKJJ01000010.1:1673672..1675492+ >CAN33_14790-T1 ID=CAN33_14790-T1|Name=CAN33_14790-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1938bp|location=Sequence derived from alignment at NKJJ01000010.1:1673672..1675492+ (Aspergillus niger FDAARGOS_311)
ATGTCTATCTCGGAAACCGCTAAAGCTGCCGAATGCAGTAAGCAGGCGGT
CAAATATATCCGCTCCAACCTGCGGGTCTTCGGCTCTCCTAGAGCACCGC
CAACTCGAGTTGGCCGAGCGAGATTAATCACACCGGTCATGCTGGAAGCA
CTATGCGAACACCTTCTTGAAAAGCCTGGCTTGTACCTAGACGAGATGGC
AATGTTCCTCTGGGATGAGTTTGGCCTGCAAGTAGCAACCAGCAGCATAA
GCAGGGCCCTTTCCTCGGTCGGTTGGTCCAAAAAGACGGTTCAGCAGAAA
GCAAAAGAGCAGAATCCCGATCTACGCGATGAATATATCCATGAAATATC
TGAATTCAAGTCATACCAACTGGTATTTGTTGATGAATCTGGATGTGACA
AGCGGATAGGATTTAGACGCACGGGCTGGGCCCCTAGTGGTATTGCACCA
GTGCAAGTATCCCGGTTTCATCGCGACAAACGTTACCAGATTCTACCTGC
ATACTCCCAGGATGGTGTTGTCTTGTTCCGCATCTTCAATGGCACAACAG
ACGCAGTTGTCTTTGAGGAGTTCATCGAAGATCTCCTTCGGTACTGTAGG
AAGTACCCAGAAGAAAGGTCCGTGCTTGTAATGGATAATGCTGCATTTCA
TCACTCCGAGCGAGTAGAGCAGTTATGCTCCGAGAAGGGGGTAAAATTAA
TATTCCTACCACCGTACTCGCCTGATCTGAACCCAATTGAAGAGTTCTTT
GCCGAGCTGAAGGCCTTTATAAGGCGACATTGGTACCTCTACGAGGAAGA
CCCTAGCCAAGGCTTTGAAAATTATCTCGCACAGCTTCTTGGTGGCATTT
ATTCCCTCGAGGAGATGGTCTCTCTCCACTTGAGCCATGGGAACAAACTC
TATCGCATGCCCCAACTCCTTGTTTTCAGCACCGAAAATACCACCATCTG
GTCACTGTCCTCCCCCTAGATGTCTATCTCGGAAACCGCTAAAGCTGCCG
AATGCAGTAAGCAGGCGGTCAAATATATCCGCTCCAACCTGCGGGTCTTC
GGCTCTCCTAGAGCACCGCCAACTCGAGTTGGCCGAGCGAGATTAATCAC
ACCGGTCATGCTGGAAGCACTATGCGAACACCTTCTTGAAAAGCCTGGCT
TGTACCTAGACGAGATGGCAATGTTCCTCTGGGATGAGTTTGGCCTGCAA
GTAGCAACCAGCAGCATAAGCAGGGCCCTTTCCTCGGTCGGTTGGTCCAA
AAAGACGGTTCAGCAGAAAGCAAAAGAGCAGAATCCCGATCTACGCGATG
AATATATCCATGAAATATCTGAATTCAAGTCATACCAACTGGTATTTGTT
GATGAATCTGGATGTGACAAGCGGATAGGATTTAGACGCACGGGCTGGGC
CCCTAGTGGTATTGCACCAGTGCAAGTATCCCGGTTTCATCGCGACAAAC
GTTACCAGATTCTACCTGCATACTCCCAGGATGGTGTTGTCTTGTTCCGC
ATCTTCAATGGCACAACAGACGCAGTTGTCTTTGAGGAGTTCATCGAAGA
TCTCCTTCGGTACTGTAGGAAGTACCCAGAAGAAAGGTCCGTGCTTGTAA
TGGATAATGCTGCATTTCATCACTCCGAGCGAGTAGAGCAGTTATGCTCC
GAGAAGGGGGTAAAATTAATATTCCTACCACCGTACTCGCCTGATCTGAA
CCCAATTGAAGAGTTCTTTGCCGAGCTGAAGGCCTTTATAAGGCGACATT
GGTACCTCTACGAGGAAGACCCTAGCCAAGGCTTTGAAAATTATCTCGCA
CAGCTTCTTGGTGGCATTTATTCCCTCGAGGAGATGGTCTCTCTCCACTT
GAGCCATGGGAACAAACTCTATCGCATGCCCCAACTCCTTGTTTTCAGCA
CCGAAAATACCACCATCTGGTCACTGTCCTCCCCCTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR012337 |
| DBxref | InterPro:IPR009057 |
| DBxref | InterPro:IPR038717 |
| DBxref | InterPro:IPR025959 |
| DBxref | PFAM:PF13592 |
| DBxref | PFAM:PF13358 |
| DBxref | PFAM:PF03184 |
| Product | DDE superfamily endonuclease family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000010.1 | supercontig | NKJJ01000010.1:1673672..1675492 + |
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