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CAN33_14915-T1, CAN33_14915-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_14915-T1
Unique NameCAN33_14915-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000010.1:1777146..1778692+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_14915-T1 ID=CAN33_14915-T1|Name=CAN33_14915-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1547bp|location=Sequence derived from alignment at NKJJ01000010.1:1777146..1778692+ (Aspergillus niger FDAARGOS_311)
ATGGAAGACCGCCAAGCGAGTGTCACAATTGATGACTTTGAAAGTGAAAA
CTTACCACTGGACATGCCGGCCTGGCACAAGGATCCCCATTCTCGCCAAT
TCTGTTTGGATTATATAATTCAGACCTGGTGGACCAAGCGGTCGACCACA
ACGGCGGTGCATCGGCTTTTATCGACGACTATTTCTGCTGGCGATCCTAC
CCAACAGTGGAAGAGAACATCAAGAAGATCCAGGAGGAAGGCATACCCCG
AGTTGAACAGTGGGCCCAGCGAACGGGTGCATCCTTTGCCGCCGAAAAGA
CCGAATTAATCCACCTTACCCGGCGGAAAACGGTCCACGGGAAAGGGCAG
ATTGTAATTAACGGCCAGGTTATAAAACCGGCCGACACCGTCAAGCTTCT
GGGAGTGATCTTCGACAAAGAGATGCGATGGAAAGAACATGTACAGAAAG
CGGTTAAACGGGCAACTAAAGTTAACATAGCCCTGAGCGGGCTCAGACAC
CTCCGACCGGAGCAAATGCGCCAGCTTTACCAAGCATGCGTAACACCAAT
CATAGACTACGCGTCCACGGTCTGGCAAAACCCGCTCCGAGACAAGATAC
ATCTGCGATTTCTGGAGACAGTACAGAGAACAGCTCTTATCCGAATCCTT
TCCGCCGTCCGGACAGTATCTACGGCTGCACTCGAAGTTGAGTCCCATAT
CCTACCAACTCACTTGCGACTCAAACAGCGGGGACAAATAGTGTCTGCTC
GCCTCAGGACCCTGCCAGATGACCATCCGATCCACGAAGTAATGAGCCGA
GCAAAGGAACGCAGCACCCACACTCGCAGGGGGGCCCGCTTTCTCCTAGC
TGAAACACTGCGAACCATGAACCTCGGGCGGCTGCAGGCCTTAGGAACAA
TTGACCCTAAACCACTTGCACCATAGCGGGACCATCCCATCGTAAAAATC
GCGATCGAACCTGATCGGGAGAAAGCGCAGGCCAACGCGTGGGTGCAACA
ATCCTCAACCAGTATCACGGTCTTCTCTGATGCTTCGGGAAAAGGAAATC
AACTAGGGGCGGCAGCAGTAGCTCTTGATCACAACCAGCAGATAACGGGG
TCTCGACAAATCAGTATTGGCTCAATGGAATACTGGTCGGTCTACGCGGC
CAAGCTCATGGCAATCTACTATGCAATCGGACTGGTTTTTCAACTAGCCC
AGAAAAAGCATGCTACAACAACGGCAACCCAAGACCCAGCGACAATCCTC
AGTGACAGTATGTCCGCGCTACAAGTAATCGCCAACTCATGGAATAAATC
GGGCCAGCGAATCATCCAAGCTATCCACCAGTCGGCTGCAGAACTCAAGG
CACGAGGAATCCCACTGCGATTGCAATGGGTCCCGGGCTACTGCGGTGAC
CCTGGGAATGAAACGGCGGACCGTCTGGCCAAGGAAGCGGTGGGTGCAGA
AAAGAAACACCCTTTCCAGCATCTGCTATCGCGGGAGAAGGCTTTCATCC
GTAACAAGATTAAAAACGAATGGGAACAAGAATGGAAGACCTCCTAG
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Coding sequence (CDS) from alignment at NKJJ01000010.1:1777146..1778692+

>CAN33_14915-T1 ID=CAN33_14915-T1|Name=CAN33_14915-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3987bp|location=Sequence derived from alignment at NKJJ01000010.1:1777146..1778692+ (Aspergillus niger FDAARGOS_311)
ATGGAAGACCGCCAAGCGAGTGTCACAATTGATGACTTTGAAAACCTGGT
GGACCAAGCGGTCGACCACAACGGCGGTGCATCGGCTTTTATCGACGACT
ATTTCTGCTGGCGATCCTACCCAACAGTGGAAGAGAACATCAAGAAGATC
CAGGAGGAAGGCATACCCCGAGTTGAACAGTGGGCCCAGCGAACGGGTGC
ATCCTTTGCCGCCGAAAAGACCGAATTAATCCACCTTACCCGGCGGAAAA
CGGTCCACGGGAAAGGGCAGATTGTAATTAACGGCCAGGTTATAAAACCG
GCCGACACCGTCAAGCTTCTGGGAGTGATCTTCGACAAAGAGATGCGATG
GAAAGAACATGTACAGAAAGCGGTTAAACGGGCAACTAAAGTTAACATAG
CCCTGAGCGGGCTCAGACACCTCCGACCGGAGCAAATGCGCCAGCTTTAC
CAAGCATGCGTAACACCAATCATAGACTACGCGTCCACGGTCTGGCAAAA
CCCGCTCCGAGACAAGATACATCTGCGATTTCTGGAGACAGTACAGAGAA
CAGCTCTTATCCGAATCCTTTCCGCCGTCCGGACAGTATCTACGGCTGCA
CTCGAAGTTGAGTCCCATATCCTACCAACTCACTTGCGACTCAAACAGCG
GGGACAAATAGTGTCTGCTCGCCTCAGGACCCTGCCAGATGACCATCCGA
TCCACGAACGGGACCATCCCATCGTAAAAATCGCGATCGAACCTGATCGG
GAGAAAGCGCAGGCCAACGCGTGGGTGCAACAATCCTCAACCAGTATCAC
GGTCTTCTCTGATGCTTCGGGAAAAGGAAATCAACTAGGGGCGGCAGCAG
TAGCTCTTGATCACAACCAGCAGATAACGGGGTCTCGACAAATCAGTATT
GGCTCAATGGAATACTGGTCGGTCTACGCGGCCAAGCTCATGGCAATCTA
CTATGCAATCGGACTGGTTTTTCAACTAGCCCAGAAAAAGCATGCTACAA
CAACGGCAACCCAAGACCCAGCGACAATCCTCAGTGACAGTATGTCCGCG
CTACAAGTAATCGCCAACTCATGGAATAAATCGGGCCAGCGAATCATCCA
AGCTATCCACCAGTCGGCTGCAGAACTCAAGGCACGAGGAATCCCACTGC
GATTGCAATGGGTCCCGGGCTACTGCGGTGACCCTGGGAATGAAACGGCG
GACCGTCTGGCCAAGGAAGCGGTGGGTGCAGAAAAGAAACACCCTTTCCA
GCATCTGCTATCGCGGGAGAAGGCTTTCATCCGTAACAAGATTAAAAACG
AATGGGAACAAGAATGGAAGACCTCCTAGATGGAAGACCGCCAAGCGAGT
GTCACAATTGATGACTTTGAAAACCTGGTGGACCAAGCGGTCGACCACAA
CGGCGGTGCATCGGCTTTTATCGACGACTATTTCTGCTGGCGATCCTACC
CAACAGTGGAAGAGAACATCAAGAAGATCCAGGAGGAAGGCATACCCCGA
GTTGAACAGTGGGCCCAGCGAACGGGTGCATCCTTTGCCGCCGAAAAGAC
CGAATTAATCCACCTTACCCGGCGGAAAACGGTCCACGGGAAAGGGCAGA
TTGTAATTAACGGCCAGGTTATAAAACCGGCCGACACCGTCAAGCTTCTG
GGAGTGATCTTCGACAAAGAGATGCGATGGAAAGAACATGTACAGAAAGC
GGTTAAACGGGCAACTAAAGTTAACATAGCCCTGAGCGGGCTCAGACACC
TCCGACCGGAGCAAATGCGCCAGCTTTACCAAGCATGCGTAACACCAATC
ATAGACTACGCGTCCACGGTCTGGCAAAACCCGCTCCGAGACAAGATACA
TCTGCGATTTCTGGAGACAGTACAGAGAACAGCTCTTATCCGAATCCTTT
CCGCCGTCCGGACAGTATCTACGGCTGCACTCGAAGTTGAGTCCCATATC
CTACCAACTCACTTGCGACTCAAACAGCGGGGACAAATAGTGTCTGCTCG
CCTCAGGACCCTGCCAGATGACCATCCGATCCACGAACGGGACCATCCCA
TCGTAAAAATCGCGATCGAACCTGATCGGGAGAAAGCGCAGGCCAACGCG
TGGGTGCAACAATCCTCAACCAGTATCACGGTCTTCTCTGATGCTTCGGG
AAAAGGAAATCAACTAGGGGCGGCAGCAGTAGCTCTTGATCACAACCAGC
AGATAACGGGGTCTCGACAAATCAGTATTGGCTCAATGGAATACTGGTCG
GTCTACGCGGCCAAGCTCATGGCAATCTACTATGCAATCGGACTGGTTTT
TCAACTAGCCCAGAAAAAGCATGCTACAACAACGGCAACCCAAGACCCAG
CGACAATCCTCAGTGACAGTATGTCCGCGCTACAAGTAATCGCCAACTCA
TGGAATAAATCGGGCCAGCGAATCATCCAAGCTATCCACCAGTCGGCTGC
AGAACTCAAGGCACGAGGAATCCCACTGCGATTGCAATGGGTCCCGGGCT
ACTGCGGTGACCCTGGGAATGAAACGGCGGACCGTCTGGCCAAGGAAGCG
GTGGGTGCAGAAAAGAAACACCCTTTCCAGCATCTGCTATCGCGGGAGAA
GGCTTTCATCCGTAACAAGATTAAAAACGAATGGGAACAAGAATGGAAGA
CCTCCTAGATGGAAGACCGCCAAGCGAGTGTCACAATTGATGACTTTGAA
AACCTGGTGGACCAAGCGGTCGACCACAACGGCGGTGCATCGGCTTTTAT
CGACGACTATTTCTGCTGGCGATCCTACCCAACAGTGGAAGAGAACATCA
AGAAGATCCAGGAGGAAGGCATACCCCGAGTTGAACAGTGGGCCCAGCGA
ACGGGTGCATCCTTTGCCGCCGAAAAGACCGAATTAATCCACCTTACCCG
GCGGAAAACGGTCCACGGGAAAGGGCAGATTGTAATTAACGGCCAGGTTA
TAAAACCGGCCGACACCGTCAAGCTTCTGGGAGTGATCTTCGACAAAGAG
ATGCGATGGAAAGAACATGTACAGAAAGCGGTTAAACGGGCAACTAAAGT
TAACATAGCCCTGAGCGGGCTCAGACACCTCCGACCGGAGCAAATGCGCC
AGCTTTACCAAGCATGCGTAACACCAATCATAGACTACGCGTCCACGGTC
TGGCAAAACCCGCTCCGAGACAAGATACATCTGCGATTTCTGGAGACAGT
ACAGAGAACAGCTCTTATCCGAATCCTTTCCGCCGTCCGGACAGTATCTA
CGGCTGCACTCGAAGTTGAGTCCCATATCCTACCAACTCACTTGCGACTC
AAACAGCGGGGACAAATAGTGTCTGCTCGCCTCAGGACCCTGCCAGATGA
CCATCCGATCCACGAACGGGACCATCCCATCGTAAAAATCGCGATCGAAC
CTGATCGGGAGAAAGCGCAGGCCAACGCGTGGGTGCAACAATCCTCAACC
AGTATCACGGTCTTCTCTGATGCTTCGGGAAAAGGAAATCAACTAGGGGC
GGCAGCAGTAGCTCTTGATCACAACCAGCAGATAACGGGGTCTCGACAAA
TCAGTATTGGCTCAATGGAATACTGGTCGGTCTACGCGGCCAAGCTCATG
GCAATCTACTATGCAATCGGACTGGTTTTTCAACTAGCCCAGAAAAAGCA
TGCTACAACAACGGCAACCCAAGACCCAGCGACAATCCTCAGTGACAGTA
TGTCCGCGCTACAAGTAATCGCCAACTCATGGAATAAATCGGGCCAGCGA
ATCATCCAAGCTATCCACCAGTCGGCTGCAGAACTCAAGGCACGAGGAAT
CCCACTGCGATTGCAATGGGTCCCGGGCTACTGCGGTGACCCTGGGAATG
AAACGGCGGACCGTCTGGCCAAGGAAGCGGTGGGTGCAGAAAAGAAACAC
CCTTTCCAGCATCTGCTATCGCGGGAGAAGGCTTTCATCCGTAACAAGAT
TAAAAACGAATGGGAACAAGAATGGAAGACCTCCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0004523RNA-DNA hybrid ribonuclease activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_14915CAN33_14915Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_14915-T1.exon1CAN33_14915-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_14915-T1.exon2CAN33_14915-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_14915-T1.exon3CAN33_14915-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_14915-T1.cdsCAN33_14915-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_14915-T1CAN33_14915-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR012337
DBxrefInterPro:IPR036397
DBxrefInterPro:IPR002156
DBxrefPFAM:PF00075
ProductRNase H family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000010.1supercontigNKJJ01000010.1:1777146..1778692 +
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