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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000010.1:1901710..1903041- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_15095-T1 ID=CAN33_15095-T1|Name=CAN33_15095-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1332bp|location=Sequence derived from alignment at NKJJ01000010.1:1901710..1903041- (Aspergillus niger FDAARGOS_311)
ATGGCTGCACTCGAAGTTGAGTCCTATATCCTACCAACTCACTTGCGACT
CAAGCAGCGGGGACAAATAGTGGCTGCTCGCTTCAGCACCCTGCCAGATG
ACCACCCGGTTCACCAGGTAATAAGCCGAGCAAAGGAACGCAGCACTTAT
ATCGGTAGCGGGGCCCGCTTTCCCCTAGCCGAAACACTGCGAACCATGAG
CCTCGGGCGGCTGCAGGCCTTAGAAACAATTGACCCCAAACCACTTGCGC
CATGGCGGAGCCAGCCCCTTACAGAAATCGAGATTGAGCCTGATCGAGAG
AAAGCGCAGGCCAACGCACTGGCACAGCAATCCACAACAGGTATCACAGT
CTTCTCAGACGCTTCTGGAAAAGAGAGTCAACTAGGCGCCGCAGCAGTAG
CTCTTGACCGCAACCGGCAGATAACGGGGTCTCGACAAATCAGCATCGAC
TTAATGGAACACTGGTCGGTCTATGCGGCCGAGCTCATGGCAATCTACTA
TGCTATCGGGCTGGTTTTTCAACTAGCCCAGAAGGTGCATGCTACAACAA
CGGCAACCCAAGACCCAGCGACAATCCTCAGCGACAGTATGTCCGCGGTA
CAAGTAATCGCCGACTCATGGAATAAATCGGGCCAGCGAATCATCCAAGC
TATCCATCAGTCGGCTGCAGAACTCAAGGCACGAGGAATCCCACTGCGAT
TGCAATGGGTCCCGGGCTACTGCGGTGACCCTGGGAATGAAACGGCGGAC
CGTCTGGCCAAGGAAGCGGTGGGTGCAGAAAAGAAACACCCTTTCCAGCA
TCTGCTATCGCGGGAGAAGGCTTTCATCCGTAACAAGATTAAAAATGAAT
GGGAACAAGAATGGAAGACCTCCAAGAACGGAGGGCACCTCCGCCGCATG
GACCGGGCTCTACCCGCGTGCCGCACGCGTCGACTGTACGGCTCACTTCC
CCGCAACCGTGCTTACCTGCTGGCGCAACTTCGGACCGGCCACTCATGGC
TCCCCACCTATGCTAAGCAACATGGCTTCCGAGATAACGAGCAGTGCGAA
TGTGGAGCGACAGAAACCGTGGTCCATGTTTTAGTTGACTGCCCGCGGCT
GAGTGCCCTACAGCAAGAACAGCGGCGGAAAATCGGAGGCGTGTTTAACA
ACGCTTCAGATATGCTAAAAGGAGCAGGCCAAGGTAAGGAAGGTAAGTTG
GAAGATGCCACGCAGAACGGTAGCGTCCTAGGGGCGGTACTGGATTTTGC
AGAGGCGTCGCAGAGATTTCGAAGTTGCGCGCCACGAGGGCGGCAGAACA
GAACACCAGGCAACGGCCAACACAGGCCTTGA back to topCoding sequence (CDS) from alignment at NKJJ01000010.1:1901710..1903041- >CAN33_15095-T1 ID=CAN33_15095-T1|Name=CAN33_15095-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1332bp|location=Sequence derived from alignment at NKJJ01000010.1:1901710..1903041- (Aspergillus niger FDAARGOS_311)
ATGGCTGCACTCGAAGTTGAGTCCTATATCCTACCAACTCACTTGCGACT
CAAGCAGCGGGGACAAATAGTGGCTGCTCGCTTCAGCACCCTGCCAGATG
ACCACCCGGTTCACCAGGTAATAAGCCGAGCAAAGGAACGCAGCACTTAT
ATCGGTAGCGGGGCCCGCTTTCCCCTAGCCGAAACACTGCGAACCATGAG
CCTCGGGCGGCTGCAGGCCTTAGAAACAATTGACCCCAAACCACTTGCGC
CATGGCGGAGCCAGCCCCTTACAGAAATCGAGATTGAGCCTGATCGAGAG
AAAGCGCAGGCCAACGCACTGGCACAGCAATCCACAACAGGTATCACAGT
CTTCTCAGACGCTTCTGGAAAAGAGAGTCAACTAGGCGCCGCAGCAGTAG
CTCTTGACCGCAACCGGCAGATAACGGGGTCTCGACAAATCAGCATCGAC
TTAATGGAACACTGGTCGGTCTATGCGGCCGAGCTCATGGCAATCTACTA
TGCTATCGGGCTGGTTTTTCAACTAGCCCAGAAGGTGCATGCTACAACAA
CGGCAACCCAAGACCCAGCGACAATCCTCAGCGACAGTATGTCCGCGGTA
CAAGTAATCGCCGACTCATGGAATAAATCGGGCCAGCGAATCATCCAAGC
TATCCATCAGTCGGCTGCAGAACTCAAGGCACGAGGAATCCCACTGCGAT
TGCAATGGGTCCCGGGCTACTGCGGTGACCCTGGGAATGAAACGGCGGAC
CGTCTGGCCAAGGAAGCGGTGGGTGCAGAAAAGAAACACCCTTTCCAGCA
TCTGCTATCGCGGGAGAAGGCTTTCATCCGTAACAAGATTAAAAATGAAT
GGGAACAAGAATGGAAGACCTCCAAGAACGGAGGGCACCTCCGCCGCATG
GACCGGGCTCTACCCGCGTGCCGCACGCGTCGACTGTACGGCTCACTTCC
CCGCAACCGTGCTTACCTGCTGGCGCAACTTCGGACCGGCCACTCATGGC
TCCCCACCTATGCTAAGCAACATGGCTTCCGAGATAACGAGCAGTGCGAA
TGTGGAGCGACAGAAACCGTGGTCCATGTTTTAGTTGACTGCCCGCGGCT
GAGTGCCCTACAGCAAGAACAGCGGCGGAAAATCGGAGGCGTGTTTAACA
ACGCTTCAGATATGCTAAAAGGAGCAGGCCAAGGTAAGGAAGGTAAGTTG
GAAGATGCCACGCAGAACGGTAGCGTCCTAGGGGCGGTACTGGATTTTGC
AGAGGCGTCGCAGAGATTTCGAAGTTGCGCGCCACGAGGGCGGCAGAACA
GAACACCAGGCAACGGCCAACACAGGCCTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004523 | RNA-DNA hybrid ribonuclease activity |
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR012337 |
| DBxref | InterPro:IPR002156 |
| DBxref | InterPro:IPR036397 |
| DBxref | PFAM:PF00075 |
| Product | RNase H family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000010.1 | supercontig | NKJJ01000010.1:1901710..1903041 - |
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