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CAN33_15140-T1, CAN33_15140-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_15140-T1
Unique NameCAN33_15140-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000010.1:1931404..1933459+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_15140-T1 ID=CAN33_15140-T1|Name=CAN33_15140-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2056bp|location=Sequence derived from alignment at NKJJ01000010.1:1931404..1933459+ (Aspergillus niger FDAARGOS_311)
ATGGATCGTGAGCTGAAAACGGATGCTTTGGGAGGCCATCATCGATCAAC
TGATACTTTGCCTCATGTGCATCAATATTCTCTAAATCGAAGCAAGATAA
CTCACAACAAAGTCTCCTCGAACACTACCTCTACTATTGAAGCCCCAGAG
TCTACGAATCATTCTAGTACCAACTCTATTCCGCTTCGTGAGTCCTCATC
TTTGTCAAAGATTCCATCGTCATCTAGTCCAGTCAAGTCGTCCAATACTC
CCGATCCGAGTGAGTCGGCAACACACTTCTGCCTCTGTCATCCAGATCCA
AAGATCCCTAGGCCTCGAAATGGTATGCAAACTTGAAATGTGCTCGTTTT
TCTTCTTGAGCTGACAAATAGGTAAAAGCATTCATCCTATACCGCCAACA
TTACCAGGCTGCAGTGGCCGCGCAGAACCCAGGCCTTGCTAGTTTCGAAA
TCTCCAAAATTATTGGGGAGCAATGGAGAGGACTTCCACAGGAGACAAAG
GATGAGTGGAAAGCGCTGGCAGAGGTATGTGGGTTGTATGCTATATTACA
CTCAAGCCACCTAACCTATGACAGGAGGAGAAAGCTCGACATCGGCAACA
ATACCCGGAATACCGCTTTCAACCTCGTCGCTACAATCGGGATGGCAATC
TCCGGAGCGGAGCCTCCGGCATTAGCCATAACCCTCCAGGATCAACACTC
TGCAACCGATGCGGTGGACGTCTTCTTAACCCCCCCGTTTCACCCGAAAT
TCCTTATACAGCGAGGGCCTCATTACTCGGCGCAAAACCGGCATCTGGCG
AGGACTTTGCAGCACGTAGTAGCCAGTTTCAAGCAGCCGAAGATCTGGAC
TGTGCCCCCAATGTGACCAATCTCGTGCTCAGCAGAAGCCGACAATCACG
CCTGCTTCGCCAGCAATTTGCGCAAAGCAGAAGCCGATCCCCGGATAGTA
AGCGCCGCCGGGTGAGACTGCCCCGTCCCTACGACGTCCGCGAAAGGAGC
CCTCATTCATCATTTCCTACATCTCCATATACGCCTCGCTCGGCTGCTGC
AGACTCGCGGAGCCTGTGCCAGCCTCTGCAGCATTCGTCGCCCGGGCGCA
ACGTCAAGGAGTACACTCCGCCAGATCCCAGCCTAAAGCTCACACGGCTA
CAGACCGCTGCCCATGTTTCACGGACTAACACACCAACGACTCCCTATTC
GCATGGAACTAGCATTGAGGCCACTGTCATGACGATTCCCTTCCTCGATA
AGATCAAAATGCTGGCCAAAATCTCCCCTCCCTTAACGCCAGCTTACCAT
GACGGCTATTCGGTTCGACGTGGAGTTGTGATTGCGGTGGACGGACAAGA
CCCTGTCCTTGTCAAGACATTGATTGGATTTCTTAACAACACATTACGGA
AGGATGGCAGATATCATACCCGAGTTTTTGATGGCCCAGAGATTCAGTCT
CGTGAGAGCTACTCTGATTCTGAGCAGAAGGCTGATGCAATTGCTGGCTA
TCTCAATATCATTATATCATGGCACCGTATCTCATCAGAGATAGTCAGCT
TTGTCAAACCTTCATGGGCGTCCTCGGAGCCAAGGTCAGTTGAGGAGGAA
TCTACATCGGGTGTGTCACCGAGAACCATCATTCCCAAGCCTGCCGAGTT
GCAGATCAACTCTCTTGAGCAATCCAGCAATAACAACTCCATGTCAACAG
GACCTTCTGGACCGGGCTTAATAACGGTATCTGTGCCCGTCGCGCTTATT
CCTCAGTACCAACTAACAACTACGGATGCTTTTGCTTGCTCCGTTCAAAG
CAGGGATTCGTATGCACCACTTGATCACTGGGAGTGGATGGCATCTCTCT
GGCGTGCACTTGTGGGTCCGGATGTAACGGTTTACATTCGAGAATGCCGG
AAGGAAGAGTTAGAGCGTCATGGAGCAAATCCGGTGGAGATTCGCCTCCA
TGATGCGCGTACCATTGTGGTAAGAGTTGCCGCATCATCAAATCAATTGA
TGGAAAAATCTCTCAGAAGAGTTGCCTTCGAAATTGAGGACTTTCTCACT
CAGTGA
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Coding sequence (CDS) from alignment at NKJJ01000010.1:1931404..1933459+

>CAN33_15140-T1 ID=CAN33_15140-T1|Name=CAN33_15140-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5850bp|location=Sequence derived from alignment at NKJJ01000010.1:1931404..1933459+ (Aspergillus niger FDAARGOS_311)
ATGGATCGTGAGCTGAAAACGGATGCTTTGGGAGGCCATCATCGATCAAC
TGATACTTTGCCTCATGTGCATCAATATTCTCTAAATCGAAGCAAGATAA
CTCACAACAAAGTCTCCTCGAACACTACCTCTACTATTGAAGCCCCAGAG
TCTACGAATCATTCTAGTACCAACTCTATTCCGCTTCGTGAGTCCTCATC
TTTGTCAAAGATTCCATCGTCATCTAGTCCAGTCAAGTCGTCCAATACTC
CCGATCCGAGTGAGTCGGCAACACACTTCTGCCTCTGTCATCCAGATCCA
AAGATCCCTAGGCCTCGAAATGCATTCATCCTATACCGCCAACATTACCA
GGCTGCAGTGGCCGCGCAGAACCCAGGCCTTGCTAGTTTCGAAATCTCCA
AAATTATTGGGGAGCAATGGAGAGGACTTCCACAGGAGACAAAGGATGAG
TGGAAAGCGCTGGCAGAGGAGGAGAAAGCTCGACATCGGCAACAATACCC
GGAATACCGCTTTCAACCTCGTCGCTACAATCGGGATGGCAATCTCCGGA
GCGGAGCCTCCGGCATTAGCCATAACCCTCCAGGATCAACACTCTGCAAC
CGATGCGGTGGACGTCTTCTTAACCCCCCCGTTTCACCCGAAATTCCTTA
TACAGCGAGGGCCTCATTACTCGGCGCAAAACCGGCATCTGGCGAGGACT
TTGCAGCACGTAGTAGCCAGTTTCAAGCAGCCGAAGATCTGGACTGTGCC
CCCAATGTGACCAATCTCGTGCTCAGCAGAAGCCGACAATCACGCCTGCT
TCGCCAGCAATTTGCGCAAAGCAGAAGCCGATCCCCGGATAGTAAGCGCC
GCCGGGTGAGACTGCCCCGTCCCTACGACGTCCGCGAAAGGAGCCCTCAT
TCATCATTTCCTACATCTCCATATACGCCTCGCTCGGCTGCTGCAGACTC
GCGGAGCCTGTGCCAGCCTCTGCAGCATTCGTCGCCCGGGCGCAACGTCA
AGGAGTACACTCCGCCAGATCCCAGCCTAAAGCTCACACGGCTACAGACC
GCTGCCCATGTTTCACGGACTAACACACCAACGACTCCCTATTCGCATGG
AACTAGCATTGAGGCCACTGTCATGACGATTCCCTTCCTCGATAAGATCA
AAATGCTGGCCAAAATCTCCCCTCCCTTAACGCCAGCTTACCATGACGGC
TATTCGGTTCGACGTGGAGTTGTGATTGCGGTGGACGGACAAGACCCTGT
CCTTGTCAAGACATTGATTGGATTTCTTAACAACACATTACGGAAGGATG
GCAGATATCATACCCGAGTTTTTGATGGCCCAGAGATTCAGTCTCGTGAG
AGCTACTCTGATTCTGAGCAGAAGGCTGATGCAATTGCTGGCTATCTCAA
TATCATTATATCATGGCACCGTATCTCATCAGAGATAGTCAGCTTTGTCA
AACCTTCATGGGCGTCCTCGGAGCCAAGGTCAGTTGAGGAGGAATCTACA
TCGGGTGTGTCACCGAGAACCATCATTCCCAAGCCTGCCGAGTTGCAGAT
CAACTCTCTTGAGCAATCCAGCAATAACAACTCCATGTCAACAGGACCTT
CTGGACCGGGCTTAATAACGGTATCTGTGCCCGTCGCGCTTATTCCTCAG
TACCAACTAACAACTACGGATGCTTTTGCTTGCTCCGTTCAAAGCAGGGA
TTCGTATGCACCACTTGATCACTGGGAGTGGATGGCATCTCTCTGGCGTG
CACTTGTGGGTCCGGATGTAACGGTTTACATTCGAGAATGCCGGAAGGAA
GAGTTAGAGCGTCATGGAGCAAATCCGGTGGAGATTCGCCTCCATGATGC
GCGTACCATTGTGGTAAGAGTTGCCGCATCATCAAATCAATTGATGGAAA
AATCTCTCAGAAGAGTTGCCTTCGAAATTGAGGACTTTCTCACTCAGTGA
ATGGATCGTGAGCTGAAAACGGATGCTTTGGGAGGCCATCATCGATCAAC
TGATACTTTGCCTCATGTGCATCAATATTCTCTAAATCGAAGCAAGATAA
CTCACAACAAAGTCTCCTCGAACACTACCTCTACTATTGAAGCCCCAGAG
TCTACGAATCATTCTAGTACCAACTCTATTCCGCTTCGTGAGTCCTCATC
TTTGTCAAAGATTCCATCGTCATCTAGTCCAGTCAAGTCGTCCAATACTC
CCGATCCGAGTGAGTCGGCAACACACTTCTGCCTCTGTCATCCAGATCCA
AAGATCCCTAGGCCTCGAAATGCATTCATCCTATACCGCCAACATTACCA
GGCTGCAGTGGCCGCGCAGAACCCAGGCCTTGCTAGTTTCGAAATCTCCA
AAATTATTGGGGAGCAATGGAGAGGACTTCCACAGGAGACAAAGGATGAG
TGGAAAGCGCTGGCAGAGGAGGAGAAAGCTCGACATCGGCAACAATACCC
GGAATACCGCTTTCAACCTCGTCGCTACAATCGGGATGGCAATCTCCGGA
GCGGAGCCTCCGGCATTAGCCATAACCCTCCAGGATCAACACTCTGCAAC
CGATGCGGTGGACGTCTTCTTAACCCCCCCGTTTCACCCGAAATTCCTTA
TACAGCGAGGGCCTCATTACTCGGCGCAAAACCGGCATCTGGCGAGGACT
TTGCAGCACGTAGTAGCCAGTTTCAAGCAGCCGAAGATCTGGACTGTGCC
CCCAATGTGACCAATCTCGTGCTCAGCAGAAGCCGACAATCACGCCTGCT
TCGCCAGCAATTTGCGCAAAGCAGAAGCCGATCCCCGGATAGTAAGCGCC
GCCGGGTGAGACTGCCCCGTCCCTACGACGTCCGCGAAAGGAGCCCTCAT
TCATCATTTCCTACATCTCCATATACGCCTCGCTCGGCTGCTGCAGACTC
GCGGAGCCTGTGCCAGCCTCTGCAGCATTCGTCGCCCGGGCGCAACGTCA
AGGAGTACACTCCGCCAGATCCCAGCCTAAAGCTCACACGGCTACAGACC
GCTGCCCATGTTTCACGGACTAACACACCAACGACTCCCTATTCGCATGG
AACTAGCATTGAGGCCACTGTCATGACGATTCCCTTCCTCGATAAGATCA
AAATGCTGGCCAAAATCTCCCCTCCCTTAACGCCAGCTTACCATGACGGC
TATTCGGTTCGACGTGGAGTTGTGATTGCGGTGGACGGACAAGACCCTGT
CCTTGTCAAGACATTGATTGGATTTCTTAACAACACATTACGGAAGGATG
GCAGATATCATACCCGAGTTTTTGATGGCCCAGAGATTCAGTCTCGTGAG
AGCTACTCTGATTCTGAGCAGAAGGCTGATGCAATTGCTGGCTATCTCAA
TATCATTATATCATGGCACCGTATCTCATCAGAGATAGTCAGCTTTGTCA
AACCTTCATGGGCGTCCTCGGAGCCAAGGTCAGTTGAGGAGGAATCTACA
TCGGGTGTGTCACCGAGAACCATCATTCCCAAGCCTGCCGAGTTGCAGAT
CAACTCTCTTGAGCAATCCAGCAATAACAACTCCATGTCAACAGGACCTT
CTGGACCGGGCTTAATAACGGTATCTGTGCCCGTCGCGCTTATTCCTCAG
TACCAACTAACAACTACGGATGCTTTTGCTTGCTCCGTTCAAAGCAGGGA
TTCGTATGCACCACTTGATCACTGGGAGTGGATGGCATCTCTCTGGCGTG
CACTTGTGGGTCCGGATGTAACGGTTTACATTCGAGAATGCCGGAAGGAA
GAGTTAGAGCGTCATGGAGCAAATCCGGTGGAGATTCGCCTCCATGATGC
GCGTACCATTGTGGTAAGAGTTGCCGCATCATCAAATCAATTGATGGAAA
AATCTCTCAGAAGAGTTGCCTTCGAAATTGAGGACTTTCTCACTCAGTGA
ATGGATCGTGAGCTGAAAACGGATGCTTTGGGAGGCCATCATCGATCAAC
TGATACTTTGCCTCATGTGCATCAATATTCTCTAAATCGAAGCAAGATAA
CTCACAACAAAGTCTCCTCGAACACTACCTCTACTATTGAAGCCCCAGAG
TCTACGAATCATTCTAGTACCAACTCTATTCCGCTTCGTGAGTCCTCATC
TTTGTCAAAGATTCCATCGTCATCTAGTCCAGTCAAGTCGTCCAATACTC
CCGATCCGAGTGAGTCGGCAACACACTTCTGCCTCTGTCATCCAGATCCA
AAGATCCCTAGGCCTCGAAATGCATTCATCCTATACCGCCAACATTACCA
GGCTGCAGTGGCCGCGCAGAACCCAGGCCTTGCTAGTTTCGAAATCTCCA
AAATTATTGGGGAGCAATGGAGAGGACTTCCACAGGAGACAAAGGATGAG
TGGAAAGCGCTGGCAGAGGAGGAGAAAGCTCGACATCGGCAACAATACCC
GGAATACCGCTTTCAACCTCGTCGCTACAATCGGGATGGCAATCTCCGGA
GCGGAGCCTCCGGCATTAGCCATAACCCTCCAGGATCAACACTCTGCAAC
CGATGCGGTGGACGTCTTCTTAACCCCCCCGTTTCACCCGAAATTCCTTA
TACAGCGAGGGCCTCATTACTCGGCGCAAAACCGGCATCTGGCGAGGACT
TTGCAGCACGTAGTAGCCAGTTTCAAGCAGCCGAAGATCTGGACTGTGCC
CCCAATGTGACCAATCTCGTGCTCAGCAGAAGCCGACAATCACGCCTGCT
TCGCCAGCAATTTGCGCAAAGCAGAAGCCGATCCCCGGATAGTAAGCGCC
GCCGGGTGAGACTGCCCCGTCCCTACGACGTCCGCGAAAGGAGCCCTCAT
TCATCATTTCCTACATCTCCATATACGCCTCGCTCGGCTGCTGCAGACTC
GCGGAGCCTGTGCCAGCCTCTGCAGCATTCGTCGCCCGGGCGCAACGTCA
AGGAGTACACTCCGCCAGATCCCAGCCTAAAGCTCACACGGCTACAGACC
GCTGCCCATGTTTCACGGACTAACACACCAACGACTCCCTATTCGCATGG
AACTAGCATTGAGGCCACTGTCATGACGATTCCCTTCCTCGATAAGATCA
AAATGCTGGCCAAAATCTCCCCTCCCTTAACGCCAGCTTACCATGACGGC
TATTCGGTTCGACGTGGAGTTGTGATTGCGGTGGACGGACAAGACCCTGT
CCTTGTCAAGACATTGATTGGATTTCTTAACAACACATTACGGAAGGATG
GCAGATATCATACCCGAGTTTTTGATGGCCCAGAGATTCAGTCTCGTGAG
AGCTACTCTGATTCTGAGCAGAAGGCTGATGCAATTGCTGGCTATCTCAA
TATCATTATATCATGGCACCGTATCTCATCAGAGATAGTCAGCTTTGTCA
AACCTTCATGGGCGTCCTCGGAGCCAAGGTCAGTTGAGGAGGAATCTACA
TCGGGTGTGTCACCGAGAACCATCATTCCCAAGCCTGCCGAGTTGCAGAT
CAACTCTCTTGAGCAATCCAGCAATAACAACTCCATGTCAACAGGACCTT
CTGGACCGGGCTTAATAACGGTATCTGTGCCCGTCGCGCTTATTCCTCAG
TACCAACTAACAACTACGGATGCTTTTGCTTGCTCCGTTCAAAGCAGGGA
TTCGTATGCACCACTTGATCACTGGGAGTGGATGGCATCTCTCTGGCGTG
CACTTGTGGGTCCGGATGTAACGGTTTACATTCGAGAATGCCGGAAGGAA
GAGTTAGAGCGTCATGGAGCAAATCCGGTGGAGATTCGCCTCCATGATGC
GCGTACCATTGTGGTAAGAGTTGCCGCATCATCAAATCAATTGATGGAAA
AATCTCTCAGAAGAGTTGCCTTCGAAATTGAGGACTTTCTCACTCAGTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_15140CAN33_15140Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_15140-T1.exon1CAN33_15140-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_15140-T1.exon2CAN33_15140-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_15140-T1.exon3CAN33_15140-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_15140-T1.cdsCAN33_15140-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_15140-T1CAN33_15140-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036910
DBxrefInterPro:IPR009071
DBxrefPFAM:PF09011
DBxrefPFAM:PF00505
ProductHMG (high mobility group) box family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000010.1supercontigNKJJ01000010.1:1931404..1933459 +
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