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CAN33_15205-T1, CAN33_15205-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_15205-T1
Unique NameCAN33_15205-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000010.1:1963854..1964752+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_15205-T1 ID=CAN33_15205-T1|Name=CAN33_15205-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=899bp|location=Sequence derived from alignment at NKJJ01000010.1:1963854..1964752+ (Aspergillus niger FDAARGOS_311)
ATGGCCAACGACCTCAAGGCCATCGTGGCCGAGCTCCACAGCGCCCTCGG
CCGGCAACAATTCGAAGCCGTCAACGACCTCCTCAGTCGCGGCAAGCGCG
CCCTCCTCCTGCAGAATGTCCTGATTCCCACGCCGTCAGCACCCGCCGAG
CTGGTCGCCCAGGCCCGTGAGGTTCTTGAGCTCGGAGCCATCGCCTCCAT
CCGACAGACCGACGCACCCACCTTCACAAGATACTACCAGCAGCTGCAGC
CGTTCTACGACCTGGAGCGGGACAGCACGAATGCCGGCCACGTCGACATC
CGCAGTAGCCAGCGCAGCAAGATCACAGGCTTGTATTTGCTGCTGCTCCT
GAGCATGGGCGACAGCACGAGCTTCCACACGGTGTTGGAGGGTCTGGTCG
AGGAGGCAAGTCTGAAGGACAAGAGCGTTGAGGATGATCCGTTCATCAAG
TACCCCGTTGAGCTGGAGAGGAACCTGATGGAGGGAAGCTACGATAAGGT
GTGGCGGGAGACGAACTCAGAGCGTGTGCCGTCGGAGGACTTTGCGCTGT
TCTCGAATGTGAGTATACCCTGCCTGGTACTGTCTCGAGGTGGCGGGTAG
CTAATGTTATGATGATGCAGGTCCTGGTCGGAACCATCCGCAGCGAAATC
GCAGACTGCTCCGAAAAGGCGTACCCCTCGCTCCCCATCTCCAACGCCAA
AAACCTCCTCTTCCTCGATTCGGAGGGCGCCGTGATCGAGTTCGCCCAGC
AGCGCGGCTGGGTTCTCCGTGATGGCCGCATCTATTTCCCCGTCGAGCCC
GAGGCGGCTGCTCGGTCCGAGAAGGATATCCTCGTGGCCAGCGGTACAAT
TATCGAGAATGCGATTGGCTATGCGCGCGAGCTGGAGACGATCGTTTGA
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Coding sequence (CDS) from alignment at NKJJ01000010.1:1963854..1964752+

>CAN33_15205-T1 ID=CAN33_15205-T1|Name=CAN33_15205-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1674bp|location=Sequence derived from alignment at NKJJ01000010.1:1963854..1964752+ (Aspergillus niger FDAARGOS_311)
ATGGCCAACGACCTCAAGGCCATCGTGGCCGAGCTCCACAGCGCCCTCGG
CCGGCAACAATTCGAAGCCGTCAACGACCTCCTCAGTCGCGGCAAGCGCG
CCCTCCTCCTGCAGAATGTCCTGATTCCCACGCCGTCAGCACCCGCCGAG
CTGGTCGCCCAGGCCCGTGAGGTTCTTGAGCTCGGAGCCATCGCCTCCAT
CCGACAGACCGACGCACCCACCTTCACAAGATACTACCAGCAGCTGCAGC
CGTTCTACGACCTGGAGCGGGACAGCACGAATGCCGGCCACGTCGACATC
CGCAGTAGCCAGCGCAGCAAGATCACAGGCTTGTATTTGCTGCTGCTCCT
GAGCATGGGCGACAGCACGAGCTTCCACACGGTGTTGGAGGGTCTGGTCG
AGGAGGCAAGTCTGAAGGACAAGAGCGTTGAGGATGATCCGTTCATCAAG
TACCCCGTTGAGCTGGAGAGGAACCTGATGGAGGGAAGCTACGATAAGGT
GTGGCGGGAGACGAACTCAGAGCGTGTGCCGTCGGAGGACTTTGCGCTGT
TCTCGAATGTCCTGGTCGGAACCATCCGCAGCGAAATCGCAGACTGCTCC
GAAAAGGCGTACCCCTCGCTCCCCATCTCCAACGCCAAAAACCTCCTCTT
CCTCGATTCGGAGGGCGCCGTGATCGAGTTCGCCCAGCAGCGCGGCTGGG
TTCTCCGTGATGGCCGCATCTATTTCCCCGTCGAGCCCGAGGCGGCTGCT
CGGTCCGAGAAGGATATCCTCGTGGCCAGCGGTACAATTATCGAGAATGC
GATTGGCTATGCGCGCGAGCTGGAGACGATCGTTTGAATGGCCAACGACC
TCAAGGCCATCGTGGCCGAGCTCCACAGCGCCCTCGGCCGGCAACAATTC
GAAGCCGTCAACGACCTCCTCAGTCGCGGCAAGCGCGCCCTCCTCCTGCA
GAATGTCCTGATTCCCACGCCGTCAGCACCCGCCGAGCTGGTCGCCCAGG
CCCGTGAGGTTCTTGAGCTCGGAGCCATCGCCTCCATCCGACAGACCGAC
GCACCCACCTTCACAAGATACTACCAGCAGCTGCAGCCGTTCTACGACCT
GGAGCGGGACAGCACGAATGCCGGCCACGTCGACATCCGCAGTAGCCAGC
GCAGCAAGATCACAGGCTTGTATTTGCTGCTGCTCCTGAGCATGGGCGAC
AGCACGAGCTTCCACACGGTGTTGGAGGGTCTGGTCGAGGAGGCAAGTCT
GAAGGACAAGAGCGTTGAGGATGATCCGTTCATCAAGTACCCCGTTGAGC
TGGAGAGGAACCTGATGGAGGGAAGCTACGATAAGGTGTGGCGGGAGACG
AACTCAGAGCGTGTGCCGTCGGAGGACTTTGCGCTGTTCTCGAATGTCCT
GGTCGGAACCATCCGCAGCGAAATCGCAGACTGCTCCGAAAAGGCGTACC
CCTCGCTCCCCATCTCCAACGCCAAAAACCTCCTCTTCCTCGATTCGGAG
GGCGCCGTGATCGAGTTCGCCCAGCAGCGCGGCTGGGTTCTCCGTGATGG
CCGCATCTATTTCCCCGTCGAGCCCGAGGCGGCTGCTCGGTCCGAGAAGG
ATATCCTCGTGGCCAGCGGTACAATTATCGAGAATGCGATTGGCTATGCG
CGCGAGCTGGAGACGATCGTTTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_15205CAN33_15205Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_15205-T1.exon1CAN33_15205-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_15205-T1.exon2CAN33_15205-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_15205-T1.cdsCAN33_15205-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_15205-T1CAN33_15205-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09263XN3
DBxrefInterPro:IPR000717
DBxrefInterPro:IPR033464
DBxrefPFAM:PF10075
ProductSAC3/GANP/Nin1/mts3/eIF-3 p25 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000010.1supercontigNKJJ01000010.1:1963854..1964752 +
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