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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000010.1:1967840..1968832+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_15220-T1 ID=CAN33_15220-T1|Name=CAN33_15220-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=993bp|location=Sequence derived from alignment at NKJJ01000010.1:1967840..1968832+ (Aspergillus niger FDAARGOS_311)
ATGGGAGCCCAATTCTCTCAATTCTTCCCTCCCCGCCCAACCTTCACCCC
CGATGACCTCCCCCAGCAATCGGGCAAAGTGGTGCTCATCACCGGCGGCG
CATCAGGCATTGGCTTCGAAGTAGCGAAGGTCCTCTACCGCAAAGGCGCC
AAAGTCTACATAGCAGGACGTTCAGAGTCCGCCGCTCAAGCAGCCATCCT
GGCTATCCAGAAATCCGTCCCGGAGAATGCCAAGTCCAGCACAGGCGAGC
TACATTTTCTCGAACTTCATCTAGACGACCTTACAACTATCAAATCCACC
GTATCTACCTTCAGCGCCATAGAATTGAAGCTCGATCTCCTCTTCAACAA
TGCCGGCGTGTCCCAACCCCCACTAGGCAGCGTCTCCCAACAAGGCATCG
AGCTCCAACTCGCAACCAACTGTCTGGGCCCATTTCTCCTCACCCAACTC
TTAACTCCCTTGCTCGAAGCTGCGGCATCGTCTGAGTCTGAACTTACCAC
TGCGGGCTCCGTTCGCGTCATCTGGACAAGCAGTCAGGTCGCCGAACTCT
CCGCTCCACCCGAAGGCATCATCATGTCGGAGCTGACCAACCCACCGAAG
GACGCTGTGCGAAACTATGTCACCTCCAAGCTTGGAAACTGGTTCCTGTC
TACGGAAATGGCCCGGCGGTACGGCGAGAAGGGTATCGTCAGCGTGGCGC
AGAATCCAGGCGCAGCTAATACGAACCTTCTGAGGAATGCGCGCTGGATG
AAGCTTCTCTCTTGGCCGCTGCTGCATAGTCCGGCTTTGGCGGCTCATAC
GGTGCTGTATGCGGGGTTGTCGGGGGAACTGGGGTTGGAAAATAATGGTG
CATATGTTGTTCCTTGGGGGAGACTTCATGATGCTGTGGCGCCGACGTTG
TTGGATGCGATGAAGAGGAAAGAGGAGGGTGGGACGGGGAGGGCGTGTGA
GTTTTGGGAGTTTTGTGAGGCGAGGACGAAGGATTATATGTAG back to topCoding sequence (CDS) from alignment at NKJJ01000010.1:1967840..1968832+ >CAN33_15220-T1 ID=CAN33_15220-T1|Name=CAN33_15220-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=993bp|location=Sequence derived from alignment at NKJJ01000010.1:1967840..1968832+ (Aspergillus niger FDAARGOS_311)
ATGGGAGCCCAATTCTCTCAATTCTTCCCTCCCCGCCCAACCTTCACCCC
CGATGACCTCCCCCAGCAATCGGGCAAAGTGGTGCTCATCACCGGCGGCG
CATCAGGCATTGGCTTCGAAGTAGCGAAGGTCCTCTACCGCAAAGGCGCC
AAAGTCTACATAGCAGGACGTTCAGAGTCCGCCGCTCAAGCAGCCATCCT
GGCTATCCAGAAATCCGTCCCGGAGAATGCCAAGTCCAGCACAGGCGAGC
TACATTTTCTCGAACTTCATCTAGACGACCTTACAACTATCAAATCCACC
GTATCTACCTTCAGCGCCATAGAATTGAAGCTCGATCTCCTCTTCAACAA
TGCCGGCGTGTCCCAACCCCCACTAGGCAGCGTCTCCCAACAAGGCATCG
AGCTCCAACTCGCAACCAACTGTCTGGGCCCATTTCTCCTCACCCAACTC
TTAACTCCCTTGCTCGAAGCTGCGGCATCGTCTGAGTCTGAACTTACCAC
TGCGGGCTCCGTTCGCGTCATCTGGACAAGCAGTCAGGTCGCCGAACTCT
CCGCTCCACCCGAAGGCATCATCATGTCGGAGCTGACCAACCCACCGAAG
GACGCTGTGCGAAACTATGTCACCTCCAAGCTTGGAAACTGGTTCCTGTC
TACGGAAATGGCCCGGCGGTACGGCGAGAAGGGTATCGTCAGCGTGGCGC
AGAATCCAGGCGCAGCTAATACGAACCTTCTGAGGAATGCGCGCTGGATG
AAGCTTCTCTCTTGGCCGCTGCTGCATAGTCCGGCTTTGGCGGCTCATAC
GGTGCTGTATGCGGGGTTGTCGGGGGAACTGGGGTTGGAAAATAATGGTG
CATATGTTGTTCCTTGGGGGAGACTTCATGATGCTGTGGCGCCGACGTTG
TTGGATGCGATGAAGAGGAAAGAGGAGGGTGGGACGGGGAGGGCGTGTGA
GTTTTGGGAGTTTTGTGAGGCGAGGACGAAGGATTATATGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF08659 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | short chain dehydrogenase family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000010.1 | supercontig | NKJJ01000010.1:1967840..1968832 + |
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