You are here

Home

CAN33_15240-T1, CAN33_15240-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_15240-T1
Unique NameCAN33_15240-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000010.1:1976387..1977637-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_15240-T1 ID=CAN33_15240-T1|Name=CAN33_15240-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1251bp|location=Sequence derived from alignment at NKJJ01000010.1:1976387..1977637- (Aspergillus niger FDAARGOS_311)
ATGGAGGAAGACAACGATCGGCCTAGAAAGCTTCCAAAGCTTGATCACGA
CGAGTCTCAGGATTCCGAACCCAGAATGACCGGTGCGCTGCAGGTCACGG
ATAATGCTTCTACAGCTGCTACGGCTGGCACAGACAATGCCGACAATGAG
CAACCTACCATGACATCCGAGAATGATAATACCCACGGCGCCGCCGACAG
CACTACAGCCCCCACCACCGAAGATGGAGCGCCCAAGATCTCCAAGCGCG
AGATGAAGCGCCAACGCCGCCGCGAACAATGGGACCAGCAGCGCGACCAG
CGGCTCGCAAAGCGCAAAAAAACTGCACAGGCGCGCAAAGAGCGCCGGCG
CGCAGCCTTCGAACAAGCGCGGCTGGACGGCACAGAAGCCGAACTCAAGA
AGCAATACGAACGGACTCAGGAACGCTTCCGGAAGTCGACGCTGCTTCCG
GTTACATTAGTGATTGACTGCGGATACGACGAATTGATGTTGGAGAAGGA
GCGAATTTCACTGGGGTCGCAGATCACGCGGTCGTACTCGGACAACAGTC
GGTCGGTGTATCGGTCGCACTTGGTGTTTTCGTCGTTCAATAAGAAGCTG
AAGGAGCGGTTTGATACGAAGTTGAATAAGCATTATTTGAACTGGAAGGG
GGTTAGGATCCTGCCGGATGATTTTGCCCAGGTGGCTGAGAAGGCGAAGG
AGTGGATGGTTGTTCCTGACGGGGGTAAGATGGAGGGGATGTTTGCGGAT
AAAACGGATATGAAGCCTGAGGATGGGGAGGTGATTTATCTGAGCAGTGA
TAGTCCCAATACGTTGACGGAGTTGAAGCCGTTCAGTACGTATATTATTG
GGGGCCTGGTGGATAAGAATCGGCACAAGGCGATTTGCTATAAGCAGGCT
GTGGAGAAAGGAATCAAGACGGCCAAGTTGCCTATTGGGGACTATATACA
GATGGCGTCCAGACAGGTGCTGGCTACGAATCATGTCGTGGAGATTATGC
TCAAGTGGTTGGAGCTGGGAGATTGGGGCAAGGCGTTCCTTGCTGTTATT
CCGCAGCGGAAGGGTGGTACGTTGAAGGAGTCGGGGGCTGAGGCCGACGG
GTCTCAGCAGGAGGAGAATAATGCAGAGGAGGAAGAGGAGGAGGCGTTGG
AGCAGGCTCAGGAGGTTACTGATGAGGCTGTTGAAGAAGCCCAGCAGGCT
GCAGAGGAGCCTGATCAAGCTATGGCGGAGGCACCTGTGGAGGGCAAGTG
A
back to top

Coding sequence (CDS) from alignment at NKJJ01000010.1:1976387..1977637-

>CAN33_15240-T1 ID=CAN33_15240-T1|Name=CAN33_15240-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2262bp|location=Sequence derived from alignment at NKJJ01000010.1:1976387..1977637- (Aspergillus niger FDAARGOS_311)
AAGCCCAGCAGGCTGCAGAGGAGCCTGATCAAGCTATGGCGGAGGCACCT
GTGGAGGGCAAGTGAATGGAGGAAGACAACGATCGGCCTAGAAAGCTTCC
AAAGCTTGATCACGACGAGTCTCAGGATTCCGAACCCAGAATGACCGGTG
CGCTGCAGGTCACGGATAATGCTTCTACAGCTGCTACGGCTGGCACAGAC
AATGCCGACAATGAGCAACCTACCATGACATCCGAGAATGATAATACCCA
CGGCGCCGCCGACAGCACTACAGCCCCCACCACCGAAGATGGAGCGCCCA
AGATCTCCAAGCGCGAGATGAAGCGCCAACGCCGCCGCGAACAATGGGAC
CAGCAGCGCGACCAGCGGCTCGCAAAGCGCAAAAAAACTGCACAGGCGCG
CAAAGAGCGCCGGCGCGCAGCCTTCGAACAAGCGCGGCTGGACGGCACAG
AAGCCGAACTCAAGAAGCAATACGAACGGACTCAGGAACGCTTCCGGAAG
TCGACGCTGCTTCCGGTTACATTAGTGATTGACTGCGGATACGACGAATT
GATGTTGGAGAAGGAGCGAATTTCACTGGGGTCGCAGATCACGCGGTCGT
ACTCGGACAACAGTCGGTCGGTGTATCGGTCGCACTTGGTGTTTTCGTCG
TTCAATAAGAAGCTGAAGGAGCGGTTTGATACGAAGTTGAATAAGCATTA
TTTGAACTGGAAGGGGGTTAGGATCCTGCCGGATGATTTTGCCCAGGTGG
CTGAGAAGGCGAAGGAGTGGATGGTTGTTCCTGACGGGGGTAAGATGGAG
GGGATGTTTGCGGATAAAACGGATATGAAGCCTGAGGATGGGGAGGTGAT
TTATCTGAGCAGTGATAGTCCCAATACGTTGACGGAGTTGAAGCCGTTCA
GTACGTATATTATTGGGGGCCTGGTGGATAAGAATCGGCACAAGGCGATT
TGCTATAAGCAGGCTGTGGAGAAAGGAATCAAGACGGCCAAGTTGCCTAT
TGGGGACTATATACAGATGGCGTCCAGACAGGTGCTGGCTACGAATCATG
TCGTGGAGATTATGCTCAAGTGGTTGGAGCTGGGAGATTGGGGCAAGGCG
TTCCTTGCTGTTATTCCGCAGCGGAAGGGTGAAGCCCAGCAGGCTGCAGA
GGAGCCTGATCAAGCTATGGCGGAGGCACCTGTGGAGGGCAAGTGAATGG
AGGAAGACAACGATCGGCCTAGAAAGCTTCCAAAGCTTGATCACGACGAG
TCTCAGGATTCCGAACCCAGAATGACCGGTGCGCTGCAGGTCACGGATAA
TGCTTCTACAGCTGCTACGGCTGGCACAGACAATGCCGACAATGAGCAAC
CTACCATGACATCCGAGAATGATAATACCCACGGCGCCGCCGACAGCACT
ACAGCCCCCACCACCGAAGATGGAGCGCCCAAGATCTCCAAGCGCGAGAT
GAAGCGCCAACGCCGCCGCGAACAATGGGACCAGCAGCGCGACCAGCGGC
TCGCAAAGCGCAAAAAAACTGCACAGGCGCGCAAAGAGCGCCGGCGCGCA
GCCTTCGAACAAGCGCGGCTGGACGGCACAGAAGCCGAACTCAAGAAGCA
ATACGAACGGACTCAGGAACGCTTCCGGAAGTCGACGCTGCTTCCGGTTA
CATTAGTGATTGACTGCGGATACGACGAATTGATGTTGGAGAAGGAGCGA
ATTTCACTGGGGTCGCAGATCACGCGGTCGTACTCGGACAACAGTCGGTC
GGTGTATCGGTCGCACTTGGTGTTTTCGTCGTTCAATAAGAAGCTGAAGG
AGCGGTTTGATACGAAGTTGAATAAGCATTATTTGAACTGGAAGGGGGTT
AGGATCCTGCCGGATGATTTTGCCCAGGTGGCTGAGAAGGCGAAGGAGTG
GATGGTTGTTCCTGACGGGGGTAAGATGGAGGGGATGTTTGCGGATAAAA
CGGATATGAAGCCTGAGGATGGGGAGGTGATTTATCTGAGCAGTGATAGT
CCCAATACGTTGACGGAGTTGAAGCCGTTCAGTACGTATATTATTGGGGG
CCTGGTGGATAAGAATCGGCACAAGGCGATTTGCTATAAGCAGGCTGTGG
AGAAAGGAATCAAGACGGCCAAGTTGCCTATTGGGGACTATATACAGATG
GCGTCCAGACAGGTGCTGGCTACGAATCATGTCGTGGAGATTATGCTCAA
GTGGTTGGAGCTGGGAGATTGGGGCAAGGCGTTCCTTGCTGTTATTCCGC
AGCGGAAGGGTG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TRM10CAN33_15240Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_15240-T1CAN33_15240-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_15240-T1.cdsCAN33_15240-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_15240-T1.exon2CAN33_15240-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_15240-T1.exon1CAN33_15240-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteBUSCO:EOG09263760
DBxrefInterPro:IPR028564
DBxrefInterPro:IPR016009
DBxrefInterPro:IPR038459
DBxrefPFAM:PF01746
ProducttRNA (guanine(9)-N(1))-methyltransferase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000010.1supercontigNKJJ01000010.1:1976387..1977637 -
Powered by Drupal