You are here

Home

CAN33_15265-T1, CAN33_15265-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_15265-T1
Unique NameCAN33_15265-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000010.1:1991879..1992612-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_15265-T1 ID=CAN33_15265-T1|Name=CAN33_15265-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=734bp|location=Sequence derived from alignment at NKJJ01000010.1:1991879..1992612- (Aspergillus niger FDAARGOS_311)
ATGACAACAAATCCTCACGACCATATAGCCACCCACCTCCTGACCACAAA
ATCCCTCCCCGTCTCCCCCACCTGGCTCACCACCTTCCTCTCCTCAACAT
CAACCTCACGCACCATCCCCCTCAGCGCCCTTACCCAAACCGCCCTCTTC
CGCATCCTCACCTCCGACATCCGCGACTCCCTCAGCACCAGCAGCCCCTC
AACCCTCCTCCCAACCGACATCTTCAACCCCACCATCCAAGAACGCCGTC
TCAATGGCCCCATCCCACTCCAAGTCCTCGACATCGAAGACATCGGCACA
AGCCTCTGGAGCCAAGTGGAGGCTATTGAGCGCGTGGAAAGGGGGGAGGC
GATCCGGGGGAGGGAAATCGTGAGGACGGTTAATGTGGGGGAGGATAGTG
AGGCTGCGGACAACAATAATGCAGCTGGTGGGGGTGAGAGTAATGGTCCG
CATCGGTTGATTCTGCAGGATGCGGCGGGACGAGGGCCGTTGGGTTGGAG
TTTGCGAGGGTCAGTGGGATTGGGTTGGGGAAGTTGGCTATTGGGGCGAA
GGTCGTCGTAAAGGATGTTACGGTTGCGAGAGGGATGGTGATGCTTACGC
CGGAGTCGTGTGTGGTCTTGGGAGGGAAGATTGAGGGGTTGGATATACAG
TGGAGGGAGGGGAGGAAGAAGAGGTTGTTGGAGAGGATTAATGGGGAGAA
TGAGGGGTCTTAGGTTTGTTAAGATGGTAGGTAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000010.1:1991879..1992612-

>CAN33_15265-T1 ID=CAN33_15265-T1|Name=CAN33_15265-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1026bp|location=Sequence derived from alignment at NKJJ01000010.1:1991879..1992612- (Aspergillus niger FDAARGOS_311)
GTAGATGACAACAAATCCTCACGACCATATAGCCACCCACCTCCTGACCA
CAAAATCCCTCCCCGTCTCCCCCACCTGGCTCACCACCTTCCTCTCCTCA
ACATCAACCTCACGCACCATCCCCCTCAGCGCCCTTACCCAAACCGCCCT
CTTCCGCATCCTCACCTCCGACATCCGCGACTCCCTCAGCACCAGCAGCC
CCTCAACCCTCCTCCCAACCGACATCTTCAACCCCACCATCCAAGAACGC
CGTCTCAATGGCCCCATCCCACTCCAAGTCCTCGACATCGAAGACATCGG
CACAAGCCTCTGGAGCCAAGTGGAGGCTATTGAGCGCGTGGAAAGGGGGG
AGGCGATCCGGGGGAGGGAAATCGTGAGGACGGTTAATGTGGGGGAGGAT
AGTGAGGCTGCGGACAACAATAATGCAGCTGGTGGGGGTGAGAGTAATGG
TCCGCATCGGTTGATTCTGCAGGATGCGGCGGGACGAGGGCCGTTGGGTT
GGAGTTTGCGAGGGTAGATGACAACAAATCCTCACGACCATATAGCCACC
CACCTCCTGACCACAAAATCCCTCCCCGTCTCCCCCACCTGGCTCACCAC
CTTCCTCTCCTCAACATCAACCTCACGCACCATCCCCCTCAGCGCCCTTA
CCCAAACCGCCCTCTTCCGCATCCTCACCTCCGACATCCGCGACTCCCTC
AGCACCAGCAGCCCCTCAACCCTCCTCCCAACCGACATCTTCAACCCCAC
CATCCAAGAACGCCGTCTCAATGGCCCCATCCCACTCCAAGTCCTCGACA
TCGAAGACATCGGCACAAGCCTCTGGAGCCAAGTGGAGGCTATTGAGCGC
GTGGAAAGGGGGGAGGCGATCCGGGGGAGGGAAATCGTGAGGACGGTTAA
TGTGGGGGAGGATAGTGAGGCTGCGGACAACAATAATGCAGCTGGTGGGG
GTGAGAGTAATGGTCCGCATCGGTTGATTCTGCAGGATGCGGCGGGACGA
GGGCCGTTGGGTTGGAGTTTGCGAGG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_15265CAN33_15265Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_15265-T1CAN33_15265-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_15265-T1.cdsCAN33_15265-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_15265-T1.exon2CAN33_15265-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_15265-T1.exon1CAN33_15265-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR013894
DBxrefInterPro:IPR033472
DBxrefPFAM:PF08585
Productprotein of unknown function (DUF1767) family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000010.1supercontigNKJJ01000010.1:1991879..1992612 -
Powered by Drupal