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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000010.1:2061108..2061962+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_15375-T1 ID=CAN33_15375-T1|Name=CAN33_15375-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=855bp|location=Sequence derived from alignment at NKJJ01000010.1:2061108..2061962+ (Aspergillus niger FDAARGOS_311)
ATGCCTGGTGGAAAGGGAAAGTCTATCGGTGGAAAGGCCGGCTCCAAGGA
CTCTGCGGGGAAGAGCCAGAAGTCCCACAGCGCAAAGGCTGGTCTGCAGG
TCCGTATTAGTCGTTCTTTTTTTCTCCTCCTGGCAGGCATATGACGCTTG
ACCCATCTCATGGGTTCTGGCGGCGACATGCCGCTGAAGCCGTTACGGCC
TGGGATTTTGCTTTTTGCCTCCTTTGCCCCTCGCGATCGCCTCTATGTTG
CCAAAAGCACGCGTATAGCTCTTTTATATTGAATAATACCCCTTTAAGAG
CTATACCGCACCGGCTAGTCACAGTTCAGGCGACAGGGTTGCGAGGGGTG
GCGGTCATGATCCCTCCCGTATTTACCTTCAAAGCTTCACTTCACACATT
CATGCCTATCTATTATCATCAGTTTCATTCGCTAACATTATCCTTCGATC
ACAGTTCCCTTGCGGTCGTGTTAAGCGCTTTTTGAAGAACAACACCCAGA
ACAAGATGCGCGTTGGCGCCAAAGGTACGACCCTTTCCATTAAGCCTACA
GAAGGCGCACCTTCCTTTGTCTCCTCTTTCAACCATGCTGACAAATCCCG
ATCGCAGCCGCCGTGTATGTCACCGCTGTTCTCGAATATCTGACCGCAGA
AGTTCTCGAATTGGCCGGAAACGCTGCCAAGGATCTCAAAGTCAAGCGTA
TCACCCCGCGTCATCTGCAGCTCGCCATCCGTGGAGATGAGGAGCTGGAT
ACCCTGATCCGCGCCACTATTGCCTTCGGAGGTGTTCTGCCGCGCATCAA
CCGCGCGCTCTTGCTGAAGGTGGAGCAAAAGAAGAAGAACAAGACTGAGG
CTTAA back to topCoding sequence (CDS) from alignment at NKJJ01000010.1:2061108..2061962+ >CAN33_15375-T1 ID=CAN33_15375-T1|Name=CAN33_15375-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1251bp|location=Sequence derived from alignment at NKJJ01000010.1:2061108..2061962+ (Aspergillus niger FDAARGOS_311)
ATGCCTGGTGGAAAGGGAAAGTCTATCGGTGGAAAGGCCGGCTCCAAGGA
CTCTGCGGGGAAGAGCCAGAAGTCCCACAGCGCAAAGGCTGGTCTGCAGT
TCCCTTGCGGTCGTGTTAAGCGCTTTTTGAAGAACAACACCCAGAACAAG
ATGCGCGTTGGCGCCAAAGCCGCCGTGTATGTCACCGCTGTTCTCGAATA
TCTGACCGCAGAAGTTCTCGAATTGGCCGGAAACGCTGCCAAGGATCTCA
AAGTCAAGCGTATCACCCCGCGTCATCTGCAGCTCGCCATCCGTGGAGAT
GAGGAGCTGGATACCCTGATCCGCGCCACTATTGCCTTCGGAGGTGTTCT
GCCGCGCATCAACCGCGCGCTCTTGCTGAAGGTGGAGCAAAAGAAGAAGA
ACAAGACTGAGGCTTAAATGCCTGGTGGAAAGGGAAAGTCTATCGGTGGA
AAGGCCGGCTCCAAGGACTCTGCGGGGAAGAGCCAGAAGTCCCACAGCGC
AAAGGCTGGTCTGCAGTTCCCTTGCGGTCGTGTTAAGCGCTTTTTGAAGA
ACAACACCCAGAACAAGATGCGCGTTGGCGCCAAAGCCGCCGTGTATGTC
ACCGCTGTTCTCGAATATCTGACCGCAGAAGTTCTCGAATTGGCCGGAAA
CGCTGCCAAGGATCTCAAAGTCAAGCGTATCACCCCGCGTCATCTGCAGC
TCGCCATCCGTGGAGATGAGGAGCTGGATACCCTGATCCGCGCCACTATT
GCCTTCGGAGGTGTTCTGCCGCGCATCAACCGCGCGCTCTTGCTGAAGGT
GGAGCAAAAGAAGAAGAACAAGACTGAGGCTTAAATGCCTGGTGGAAAGG
GAAAGTCTATCGGTGGAAAGGCCGGCTCCAAGGACTCTGCGGGGAAGAGC
CAGAAGTCCCACAGCGCAAAGGCTGGTCTGCAGTTCCCTTGCGGTCGTGT
TAAGCGCTTTTTGAAGAACAACACCCAGAACAAGATGCGCGTTGGCGCCA
AAGCCGCCGTGTATGTCACCGCTGTTCTCGAATATCTGACCGCAGAAGTT
CTCGAATTGGCCGGAAACGCTGCCAAGGATCTCAAAGTCAAGCGTATCAC
CCCGCGTCATCTGCAGCTCGCCATCCGTGGAGATGAGGAGCTGGATACCC
TGATCCGCGCCACTATTGCCTTCGGAGGTGTTCTGCCGCGCATCAACCGC
GCGCTCTTGCTGAAGGTGGAGCAAAAGAAGAAGAACAAGACTGAGGCTTA
A back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
| GO:0000786 | nucleosome |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0046982 | protein heterodimerization activity |
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007125 |
| DBxref | InterPro:IPR032454 |
| DBxref | InterPro:IPR009072 |
| DBxref | InterPro:IPR002119 |
| DBxref | PFAM:PF16211 |
| DBxref | PFAM:PF00125 |
| DBxref | PFAM:PF00808 |
| Product | histone H2A.Z |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000010.1 | supercontig | NKJJ01000010.1:2061108..2061962 + |
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