You are here

CAN33_15390-T1, CAN33_15390-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_15390-T1
Unique NameCAN33_15390-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000010.1:2077497..2078532+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_15390-T1 ID=CAN33_15390-T1|Name=CAN33_15390-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1036bp|location=Sequence derived from alignment at NKJJ01000010.1:2077497..2078532+ (Aspergillus niger FDAARGOS_311)
ATGGCTCGCGCTGCAATGAGCAAACTCTCCTGGGAGAGTCATGTCCTCCG CCCCGTGCAAAACGCACCTCCTGCCATCATTCCCACACTAATCTACGGTA CCGCTTGGAAGAAAGATCAGACCGCCGATTTGGTACACCAGGCGCTCGGA GCTGGTTTCCGCGCCGTGGACACTGCTGCCCAACCCAAGCATTATCGCGA GGACTTGGTCGGGGAAGGCATACGCAGGGCCCTCCAGGACGGCTATGTCC GACGAGAAGATCTTCATGTAAGTGGTCAATCCACGGAAAAACCCAAAATT AGAAATTCTCCCATGCATTTCATGTCTGCCTGTTGCTAATTCATGTCAGG TCCAAACCAAATTTACTTCTGTCAATGGCCAGAGTCCAGATAATATGCCG TATGACCCCAAGGCCTCGGTGACCGATCAGGTCCATGCGTCTATCAAGTC GTCGCTGCATAATCTCCGGCCGTCGAGCACGGCAGATAGCGTGAATGATG CATACATTGACATGCTCATCCTGCACTCACCGCTGCCGACGATGTCTCAG ACATTGGAGGCTTGGTCAGCAGTTGAAAGCTATGTTCCTCACCAGGTCCG TAACCTGGGTATATCCAATACCACTCTGTCCATCCTGAAAGAGCTGTTTG CCCAAGCGAAAGTGAAGCCTGCTGTGGTTCAGAACCGATTCTATGCCGAC ACGCAATACGATGTTCCCTTGAGGGCCTTTTGCCGGGAAAATCAGATCAT CTACCAGAGCTTTTGGACGCTATCGGCAAACCCTGAATTGATTCGCTCGG ATGCCGTTCAGCTGCTTGCCCACGAGGCAGACATCTCGCCAGCTGCAGCC CTTTACTGTCTTGTTCTAGGACTGGGATACACTACGGTGTTGGACGGTAC GACCAAGCGGCATCATATGGAGGCGGACTTGGCTGCCCTGCAGAAGATCG AGCGGTTTACAGAGAACCAGCCGGACCTGTGGCAGAGAATACTGAAACGC TTCCAGCAGTTGACTGGTGACCAGACAGTGGAATAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000010.1:2077497..2078532+

>CAN33_15390-T1 ID=CAN33_15390-T1|Name=CAN33_15390-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1908bp|location=Sequence derived from alignment at NKJJ01000010.1:2077497..2078532+ (Aspergillus niger FDAARGOS_311)
ATGGCTCGCGCTGCAATGAGCAAACTCTCCTGGGAGAGTCATGTCCTCCG
CCCCGTGCAAAACGCACCTCCTGCCATCATTCCCACACTAATCTACGGTA
CCGCTTGGAAGAAAGATCAGACCGCCGATTTGGTACACCAGGCGCTCGGA
GCTGGTTTCCGCGCCGTGGACACTGCTGCCCAACCCAAGCATTATCGCGA
GGACTTGGTCGGGGAAGGCATACGCAGGGCCCTCCAGGACGGCTATGTCC
GACGAGAAGATCTTCATGTCCAAACCAAATTTACTTCTGTCAATGGCCAG
AGTCCAGATAATATGCCGTATGACCCCAAGGCCTCGGTGACCGATCAGGT
CCATGCGTCTATCAAGTCGTCGCTGCATAATCTCCGGCCGTCGAGCACGG
CAGATAGCGTGAATGATGCATACATTGACATGCTCATCCTGCACTCACCG
CTGCCGACGATGTCTCAGACATTGGAGGCTTGGTCAGCAGTTGAAAGCTA
TGTTCCTCACCAGGTCCGTAACCTGGGTATATCCAATACCACTCTGTCCA
TCCTGAAAGAGCTGTTTGCCCAAGCGAAAGTGAAGCCTGCTGTGGTTCAG
AACCGATTCTATGCCGACACGCAATACGATGTTCCCTTGAGGGCCTTTTG
CCGGGAAAATCAGATCATCTACCAGAGCTTTTGGACGCTATCGGCAAACC
CTGAATTGATTCGCTCGGATGCCGTTCAGCTGCTTGCCCACGAGGCAGAC
ATCTCGCCAGCTGCAGCCCTTTACTGTCTTGTTCTAGGACTGGGATACAC
TACGGTGTTGGACGGTACGACCAAGCGGCATCATATGGAGGCGGACTTGG
CTGCCCTGCAGAAGATCGAGCGGTTTACAGAGAACCAGCCGGACCTGTGG
CAGAGAATACTGAAACGCTTCCAGCAGTTGACTGGTGACCAGACAGTGGA
ATAGATGGCTCGCGCTGCAATGAGCAAACTCTCCTGGGAGAGTCATGTCC
TCCGCCCCGTGCAAAACGCACCTCCTGCCATCATTCCCACACTAATCTAC
GGTACCGCTTGGAAGAAAGATCAGACCGCCGATTTGGTACACCAGGCGCT
CGGAGCTGGTTTCCGCGCCGTGGACACTGCTGCCCAACCCAAGCATTATC
GCGAGGACTTGGTCGGGGAAGGCATACGCAGGGCCCTCCAGGACGGCTAT
GTCCGACGAGAAGATCTTCATGTCCAAACCAAATTTACTTCTGTCAATGG
CCAGAGTCCAGATAATATGCCGTATGACCCCAAGGCCTCGGTGACCGATC
AGGTCCATGCGTCTATCAAGTCGTCGCTGCATAATCTCCGGCCGTCGAGC
ACGGCAGATAGCGTGAATGATGCATACATTGACATGCTCATCCTGCACTC
ACCGCTGCCGACGATGTCTCAGACATTGGAGGCTTGGTCAGCAGTTGAAA
GCTATGTTCCTCACCAGGTCCGTAACCTGGGTATATCCAATACCACTCTG
TCCATCCTGAAAGAGCTGTTTGCCCAAGCGAAAGTGAAGCCTGCTGTGGT
TCAGAACCGATTCTATGCCGACACGCAATACGATGTTCCCTTGAGGGCCT
TTTGCCGGGAAAATCAGATCATCTACCAGAGCTTTTGGACGCTATCGGCA
AACCCTGAATTGATTCGCTCGGATGCCGTTCAGCTGCTTGCCCACGAGGC
AGACATCTCGCCAGCTGCAGCCCTTTACTGTCTTGTTCTAGGACTGGGAT
ACACTACGGTGTTGGACGGTACGACCAAGCGGCATCATATGGAGGCGGAC
TTGGCTGCCCTGCAGAAGATCGAGCGGTTTACAGAGAACCAGCCGGACCT
GTGGCAGAGAATACTGAAACGCTTCCAGCAGTTGACTGGTGACCAGACAG
TGGAATAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_15390CAN33_15390Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_15390-T1.exon1CAN33_15390-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_15390-T1.exon2CAN33_15390-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_15390-T1.cdsCAN33_15390-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_15390-T1CAN33_15390-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR023210
DBxrefInterPro:IPR036812
DBxrefPFAM:PF00248
ProductAldo/keto reductase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000010.1supercontigNKJJ01000010.1:2077497..2078532 +