You are here

Home

CAN33_15600-T1, CAN33_15600-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_15600-T1
Unique NameCAN33_15600-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000010.1:2193367..2193862+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_15600-T1 ID=CAN33_15600-T1|Name=CAN33_15600-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=496bp|location=Sequence derived from alignment at NKJJ01000010.1:2193367..2193862+ (Aspergillus niger FDAARGOS_311)
ATGGGAAACGTAAGCCTCTTGCTGTTGCTGACTCCACGCGAAGTCCTTCC
TCCTGCTGTGAAGTGACCAGCGACTTGATTGCGCCTTATCAGACTTAACA
TGGACTTATCCACAGGGAGCCAAAGCCGCCTCCAAGCGCGAGCGCAACGC
CAAGGACACCAAGGCTGGTGGCAAGTCGCAGTTGAAGACCGTATGTATCC
TCTGTCTGTGTTTTGATTGATCGTTTTGAAACTTGAAGAAAGGGGTAGCT
TTTGTAGGGTGGTGTCGCAACTTGTGTAGACAGAAATGTATAAGTGGAGT
GGAGGGGAAATCTCCGGCGATCATGCTTACGCAGGGACTACAGAACGAAG
CTGCAAAGGACATCATCTGCCAGACTTGCAGGACGACTTTCCTCAAGACT
ACTCGTGCACCGGCCTTGACTGAGCATGCTGCCAACAAGCACAACAAGAC
CCTGCAGGACTGCTTCCCCAACTTTGTGGAGGCCCCTAAGAAATGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000010.1:2193367..2193862+

>CAN33_15600-T1 ID=CAN33_15600-T1|Name=CAN33_15600-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=711bp|location=Sequence derived from alignment at NKJJ01000010.1:2193367..2193862+ (Aspergillus niger FDAARGOS_311)
ATGGGAAACGGAGCCAAAGCCGCCTCCAAGCGCGAGCGCAACGCCAAGGA
CACCAAGGCTGGTGGCAAGTCGCAGTTGAAGACCAACGAAGCTGCAAAGG
ACATCATCTGCCAGACTTGCAGGACGACTTTCCTCAAGACTACTCGTGCA
CCGGCCTTGACTGAGCATGCTGCCAACAAGCACAACAAGACCCTGCAGGA
CTGCTTCCCCAACTTTGTGGAGGCCCCTAAGAAATGAATGGGAAACGGAG
CCAAAGCCGCCTCCAAGCGCGAGCGCAACGCCAAGGACACCAAGGCTGGT
GGCAAGTCGCAGTTGAAGACCAACGAAGCTGCAAAGGACATCATCTGCCA
GACTTGCAGGACGACTTTCCTCAAGACTACTCGTGCACCGGCCTTGACTG
AGCATGCTGCCAACAAGCACAACAAGACCCTGCAGGACTGCTTCCCCAAC
TTTGTGGAGGCCCCTAAGAAATGAATGGGAAACGGAGCCAAAGCCGCCTC
CAAGCGCGAGCGCAACGCCAAGGACACCAAGGCTGGTGGCAAGTCGCAGT
TGAAGACCAACGAAGCTGCAAAGGACATCATCTGCCAGACTTGCAGGACG
ACTTTCCTCAAGACTACTCGTGCACCGGCCTTGACTGAGCATGCTGCCAA
CAAGCACAACAAGACCCTGCAGGACTGCTTCCCCAACTTTGTGGAGGCCC
CTAAGAAATGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_15600CAN33_15600Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_15600-T1.exon1CAN33_15600-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_15600-T1.exon2CAN33_15600-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_15600-T1.exon3CAN33_15600-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_15600-T1.cdsCAN33_15600-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_15600-T1CAN33_15600-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR007513
DBxrefInterPro:IPR039438
DBxrefInterPro:IPR026939
DBxrefPFAM:PF12907
DBxrefPFAM:PF04419
ProductZinc-binding family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000010.1supercontigNKJJ01000010.1:2193367..2193862 +
Powered by Drupal